RNA–Protein interactions for RNA: ENST00000552620.1

CHMP4A-210, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 716 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-210ENST00000552620 FASNP49327 2511 aaKnown RBP3.8□□□□□ -1.8
CHMP4A-210ENST00000552620 A0A0U1RQV1 116 aa3.8□□□□□ -1.8
CHMP4A-210ENST00000552620 C3orf84H3BNL1 204 aa3.8□□□□□ -1.8
CHMP4A-210ENST00000552620 Q5XG85 94 aa3.8□□□□□ -1.8
CHMP4A-210ENST00000552620 REG3GQ6UW15 175 aa3.8□□□□□ -1.8
CHMP4A-210ENST00000552620 VWFP04275 2813 aa3.8□□□□□ -1.8
CHMP4A-210ENST00000552620 LCE6AA0A183 80 aa3.79□□□□□ -1.8
CHMP4A-210ENST00000552620 FAM168BA1KXE4 195 aa3.79□□□□□ -1.8
CHMP4A-210ENST00000552620 UBE2BP63146 152 aa3.79□□□□□ -1.8
CHMP4A-210ENST00000552620 KRTAP7-1Q8IUC3 87 aa3.79□□□□□ -1.8
CHMP4A-210ENST00000552620 ST20-AS1Q8NBB2 130 aa3.79□□□□□ -1.8
CHMP4A-210ENST00000552620 IGLV8-61A0A075B6I0 122 aa3.78□□□□□ -1.8
CHMP4A-210ENST00000552620 CNBPP62633 177 aaKnown RBP3.78□□□□□ -1.8
CHMP4A-210ENST00000552620 C4orf26Q17RF5 130 aa3.78□□□□□ -1.8
CHMP4A-210ENST00000552620 C14orf177Q52M58 125 aa3.78□□□□□ -1.8
CHMP4A-210ENST00000552620 CASC10Q5T4H9 136 aa3.78□□□□□ -1.8
CHMP4A-210ENST00000552620 PKIGQ9Y2B9 76 aa3.78□□□□□ -1.8
CHMP4A-210ENST00000552620 C16orf90A8MZG2 172 aa3.77□□□□□ -1.81
CHMP4A-210ENST00000552620 Q8N9L7 120 aa3.77□□□□□ -1.81
CHMP4A-210ENST00000552620 HELZ2Q9BYK8 2649 aaKnown RBP3.77□□□□□ -1.81
CHMP4A-210ENST00000552620 TEP1Q99973 2627 aaKnown RBP3.76□□□□□ -1.81
CHMP4A-210ENST00000552620 KRTAP29-1A8MX34 341 aaPredicted RBP3.76□□□□□ -1.81
CHMP4A-210ENST00000552620 H0Y9J4 135 aa3.76□□□□□ -1.81
CHMP4A-210ENST00000552620 DSCR10P59022 87 aa3.76□□□□□ -1.81
CHMP4A-210ENST00000552620 HRCT1Q6UXD1 115 aa3.76□□□□□ -1.81
CHMP4A-210ENST00000552620 NOTCH2NLQ7Z3S9 236 aa3.76□□□□□ -1.81
CHMP4A-210ENST00000552620 OTOGQ6ZRI0 2925 aa3.76□□□□□ -1.81
CHMP4A-210ENST00000552620 DNAH3Q8TD57 4116 aa3.76□□□□□ -1.81
CHMP4A-210ENST00000552620 DNAH1Q9P2D7 4330 aa3.75□□□□□ -1.81
CHMP4A-210ENST00000552620 CMYA5Q8N3K9 4069 aa3.75□□□□□ -1.81
CHMP4A-210ENST00000552620 NSD1Q96L73 2696 aaPredicted RBP3.75□□□□□ -1.81
CHMP4A-210ENST00000552620 IGLV7-46A0A075B6I9 117 aa3.75□□□□□ -1.81
CHMP4A-210ENST00000552620 A0A087X002 238 aa3.75□□□□□ -1.81
CHMP4A-210ENST00000552620 SPRR1BP22528 89 aa3.75□□□□□ -1.81
CHMP4A-210ENST00000552620 HCG22E2RYF7 251 aa3.74□□□□□ -1.81
CHMP4A-210ENST00000552620 K7EIL1 84 aa3.74□□□□□ -1.81
CHMP4A-210ENST00000552620 IGFL1Q6UW32 110 aa3.74□□□□□ -1.81
CHMP4A-210ENST00000552620 ZCCHC13Q8WW36 166 aaKnown RBP3.74□□□□□ -1.81
CHMP4A-210ENST00000552620 HIGD2AQ9BW72 106 aa3.74□□□□□ -1.81
CHMP4A-210ENST00000552620 ATRQ13535 2644 aa3.74□□□□□ -1.81
CHMP4A-210ENST00000552620 HIVEP1P15822 2718 aa3.73□□□□□ -1.81
CHMP4A-210ENST00000552620 A0A096LNI7 61 aa3.73□□□□□ -1.81
CHMP4A-210ENST00000552620 A0A1W2PNN7 141 aa3.73□□□□□ -1.81
CHMP4A-210ENST00000552620 PSCAO43653 123 aa3.73□□□□□ -1.81
CHMP4A-210ENST00000552620 NDUFB1O75438 58 aa3.73□□□□□ -1.81
CHMP4A-210ENST00000552620 UBE2AP49459 152 aa3.73□□□□□ -1.81
CHMP4A-210ENST00000552620 FP248Q71RG6 208 aaPredicted RBP3.73□□□□□ -1.81
CHMP4A-210ENST00000552620 TENM1Q9UKZ4 2725 aa3.72□□□□□ -1.81
CHMP4A-210ENST00000552620 TRRAPQ9Y4A5 3859 aa3.72□□□□□ -1.81
CHMP4A-210ENST00000552620 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.72□□□□□ -1.81
CHMP4A-210ENST00000552620 H3BPC8 53 aa3.72□□□□□ -1.81
CHMP4A-210ENST00000552620 K7EQZ3 153 aa3.72□□□□□ -1.81
CHMP4A-210ENST00000552620 LINC00474Q9P2X8 69 aa3.72□□□□□ -1.81
CHMP4A-210ENST00000552620 PRO0628Q9UI54 55 aa3.72□□□□□ -1.81
CHMP4A-210ENST00000552620 MP68P56378 58 aa3.71□□□□□ -1.82
CHMP4A-210ENST00000552620 LCE1AQ5T7P2 110 aa3.71□□□□□ -1.82
CHMP4A-210ENST00000552620 UBE2DNLQ8IWF7 75 aa3.71□□□□□ -1.82
CHMP4A-210ENST00000552620 C9orf163Q8N9P6 203 aa3.71□□□□□ -1.82
CHMP4A-210ENST00000552620 CYP4F30PQ9H0H9 118 aa3.71□□□□□ -1.82
CHMP4A-210ENST00000552620 APLNQ9ULZ1 77 aa3.71□□□□□ -1.82
CHMP4A-210ENST00000552620 HUWE1Q7Z6Z7 4374 aaKnown RBP3.71□□□□□ -1.82
CHMP4A-210ENST00000552620 A0A087WSZ3 146 aa3.7□□□□□ -1.82
CHMP4A-210ENST00000552620 IGKV2-24A0A0C4DH68 120 aa3.7□□□□□ -1.82
CHMP4A-210ENST00000552620 PRLHP81277 87 aa3.7□□□□□ -1.82
CHMP4A-210ENST00000552620 B9D2Q9BPU9 175 aa3.7□□□□□ -1.82
CHMP4A-210ENST00000552620 hDV103S1A0JD37 113 aa3.69□□□□□ -1.82
CHMP4A-210ENST00000552620 A8MWP4 228 aa3.69□□□□□ -1.82
CHMP4A-210ENST00000552620 PRB2P02812 416 aaPredicted RBP3.69□□□□□ -1.82
CHMP4A-210ENST00000552620 CD164Q04900 197 aa3.69□□□□□ -1.82
CHMP4A-210ENST00000552620 C1orf195Q5TG92 126 aa3.69□□□□□ -1.82
CHMP4A-210ENST00000552620 PHF5AQ7RTV0 110 aaKnown RBP3.69□□□□□ -1.82
CHMP4A-210ENST00000552620 HECTD1Q9ULT8 2610 aa3.68□□□□□ -1.82
CHMP4A-210ENST00000552620 RPL37AP61513 92 aaKnown RBP3.68□□□□□ -1.82
CHMP4A-210ENST00000552620 PRR15Q8IV56 129 aa3.68□□□□□ -1.82
CHMP4A-210ENST00000552620 KRTAP1-5Q9BYS1 174 aa3.68□□□□□ -1.82
CHMP4A-210ENST00000552620 LINC00472Q9H8W2 130 aa3.68□□□□□ -1.82
CHMP4A-210ENST00000552620 ANK2Q01484 3957 aa3.68□□□□□ -1.82
CHMP4A-210ENST00000552620 NDUFAF8A1L188 74 aa3.67□□□□□ -1.82
CHMP4A-210ENST00000552620 LRCOL1A6NCL2 159 aa3.67□□□□□ -1.82
CHMP4A-210ENST00000552620 Q1T7F1 81 aa3.67□□□□□ -1.82
CHMP4A-210ENST00000552620 FAM229BQ4G0N7 80 aa3.67□□□□□ -1.82
CHMP4A-210ENST00000552620 CASC2Q6XLA1 102 aa3.67□□□□□ -1.82
CHMP4A-210ENST00000552620 SPANXA2-OT1Q8N9U9 137 aa3.67□□□□□ -1.82
CHMP4A-210ENST00000552620 PKD1L1Q8TDX9 2849 aa3.66□□□□□ -1.82
CHMP4A-210ENST00000552620 TRAV22A0A0B4J277 110 aa3.66□□□□□ -1.82
CHMP4A-210ENST00000552620 NBDYA0A0U1RRE5 68 aa3.66□□□□□ -1.82
CHMP4A-210ENST00000552620 WFDC13Q8IUB5 93 aa3.66□□□□□ -1.82
CHMP4A-210ENST00000552620 KRTAP13-1Q8IUC0 172 aa3.66□□□□□ -1.82
CHMP4A-210ENST00000552620 C1orf64Q8NEQ6 169 aa3.66□□□□□ -1.82
CHMP4A-210ENST00000552620 DYNC2H1Q8NCM8 4307 aaKnown RBP3.66□□□□□ -1.82
CHMP4A-210ENST00000552620 A0A0G2JQZ4 141 aa3.65□□□□□ -1.83
CHMP4A-210ENST00000552620 NUPR2A6NF83 97 aa3.65□□□□□ -1.83
CHMP4A-210ENST00000552620 CHTF8P0CG12 524 aa3.65□□□□□ -1.83
CHMP4A-210ENST00000552620 DEFB116Q30KQ4 102 aa3.65□□□□□ -1.83
CHMP4A-210ENST00000552620 KRTAP11-1Q8IUC1 163 aa3.65□□□□□ -1.83
CHMP4A-210ENST00000552620 F8P00451 2351 aa3.65□□□□□ -1.83
CHMP4A-210ENST00000552620 TENM3Q9P273 2699 aa3.64□□□□□ -1.83
CHMP4A-210ENST00000552620 H0Y9P7 68 aa3.64□□□□□ -1.83
CHMP4A-210ENST00000552620 TP53AIP1Q9HCN2 124 aa3.64□□□□□ -1.83
CHMP4A-210ENST00000552620 ZNF706Q9Y5V0 76 aaPredicted RBP3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms