RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 SPRR1BP22528 89 aa2.71□□□□□ -1.98
HOXB3-213ENST00000552000 PSMB2P49721 201 aa2.71□□□□□ -1.98
HOXB3-213ENST00000552000 Q1RN00 199 aa2.71□□□□□ -1.98
HOXB3-213ENST00000552000 Q5XG85 94 aa2.71□□□□□ -1.98
HOXB3-213ENST00000552000 SLC25A34Q6PIV7 304 aa2.71□□□□□ -1.98
HOXB3-213ENST00000552000 COMMD7Q86VX2 200 aa2.71□□□□□ -1.98
HOXB3-213ENST00000552000 SMCO4Q9NRQ5 59 aa2.71□□□□□ -1.98
HOXB3-213ENST00000552000 TRAV23DV6A0A075B6W5 121 aa2.7□□□□□ -1.98
HOXB3-213ENST00000552000 A0A0G2JQZ4 141 aa2.7□□□□□ -1.98
HOXB3-213ENST00000552000 TRBV10-2A0A0K0K1G8 114 aa2.7□□□□□ -1.98
HOXB3-213ENST00000552000 TMEM223A0PJW6 202 aa2.7□□□□□ -1.98
HOXB3-213ENST00000552000 ZNF73O43830 326 aaPredicted RBP2.7□□□□□ -1.98
HOXB3-213ENST00000552000 SERF1AO75920 110 aa2.7□□□□□ -1.98
HOXB3-213ENST00000552000 MT-ND4LP03901 98 aa2.7□□□□□ -1.98
HOXB3-213ENST00000552000 HERVK_113P61574 105 aa2.7□□□□□ -1.98
HOXB3-213ENST00000552000 KRTAP20-1Q3LI63 56 aa2.7□□□□□ -1.98
HOXB3-213ENST00000552000 C6orf99Q4VX62 202 aa2.7□□□□□ -1.98
HOXB3-213ENST00000552000 S100A7L2Q5SY68 101 aa2.7□□□□□ -1.98
HOXB3-213ENST00000552000 BAGE3Q86Y29 109 aa2.7□□□□□ -1.98
HOXB3-213ENST00000552000 PRO1933Q9H354 126 aa2.7□□□□□ -1.98
HOXB3-213ENST00000552000 PRO0628Q9UI54 55 aa2.7□□□□□ -1.98
HOXB3-213ENST00000552000 A0A096LNJ9 63 aa2.69□□□□□ -1.98
HOXB3-213ENST00000552000 A0A0J9YXY3 114 aa2.69□□□□□ -1.98
HOXB3-213ENST00000552000 C8orf87E5RJ46 101 aa2.69□□□□□ -1.98
HOXB3-213ENST00000552000 MDN1Q9NU22 5596 aa2.68□□□□□ -1.98
HOXB3-213ENST00000552000 TRBV20-1A0A075B6N2 111 aa2.68□□□□□ -1.98
HOXB3-213ENST00000552000 LOC107984156A0A0G2JMH3 177 aa2.68□□□□□ -1.98
HOXB3-213ENST00000552000 LINC00587B1AMM8 73 aa2.68□□□□□ -1.98
HOXB3-213ENST00000552000 LINC00614P0C842 121 aa2.68□□□□□ -1.98
HOXB3-213ENST00000552000 AKR1D1P51857 326 aa2.68□□□□□ -1.98
HOXB3-213ENST00000552000 KRTAP10-12P60413 245 aa2.68□□□□□ -1.98
HOXB3-213ENST00000552000 PCP2Q8IVA1 136 aa2.68□□□□□ -1.98
HOXB3-213ENST00000552000 ARL17AQ8IVW1 177 aa2.68□□□□□ -1.98
HOXB3-213ENST00000552000 DEFB105AQ8NG35 78 aa2.68□□□□□ -1.98
HOXB3-213ENST00000552000 OBSCN-AS1Q96MR7 158 aa2.68□□□□□ -1.98
HOXB3-213ENST00000552000 IGHV6-1A0A0B4J1U7 121 aa2.67□□□□□ -1.98
HOXB3-213ENST00000552000 FAM236DA0A1B0GTK5 79 aa2.67□□□□□ -1.98
HOXB3-213ENST00000552000 MYMXA0A1B0GTQ4 84 aa2.67□□□□□ -1.98
HOXB3-213ENST00000552000 A0A1B0GV72 72 aa2.67□□□□□ -1.98
HOXB3-213ENST00000552000 HBDP02042 147 aa2.67□□□□□ -1.98
HOXB3-213ENST00000552000 FAM236CP0DP71 79 aa2.67□□□□□ -1.98
HOXB3-213ENST00000552000 LGALS3P17931 250 aaKnown RBP2.67□□□□□ -1.98
HOXB3-213ENST00000552000 HINT1P49773 126 aaPredicted RBP2.67□□□□□ -1.98
HOXB3-213ENST00000552000 IFITM2Q01629 132 aa2.67□□□□□ -1.98
HOXB3-213ENST00000552000 PMCHL1Q16048 86 aa2.67□□□□□ -1.98
HOXB3-213ENST00000552000 C20orf166-AS1Q96NR2 134 aa2.67□□□□□ -1.98
HOXB3-213ENST00000552000 MIEN1Q9BRT3 115 aa2.67□□□□□ -1.98
HOXB3-213ENST00000552000 TCL1BO95988 128 aa2.66□□□□□ -1.98
HOXB3-213ENST00000552000 FABP9Q0Z7S8 132 aa2.66□□□□□ -1.98
HOXB3-213ENST00000552000 C10orf91Q5T1B1 145 aa2.66□□□□□ -1.98
HOXB3-213ENST00000552000 RPS10P5Q9NQ39 176 aa2.66□□□□□ -1.98
HOXB3-213ENST00000552000 RBM12B-AS1Q9P1G2 102 aa2.66□□□□□ -1.98
HOXB3-213ENST00000552000 NDUFC2O95298 119 aa2.65□□□□□ -1.99
HOXB3-213ENST00000552000 TSPEAR-AS2P59090 65 aa2.65□□□□□ -1.99
HOXB3-213ENST00000552000 NPC2P61916 151 aa2.65□□□□□ -1.99
HOXB3-213ENST00000552000 SCGB1D4Q6XE38 83 aa2.65□□□□□ -1.99
HOXB3-213ENST00000552000 SIGMAR1Q99720 223 aa2.65□□□□□ -1.99
HOXB3-213ENST00000552000 TEX49A0A1B0GTD5 131 aa2.64□□□□□ -1.99
HOXB3-213ENST00000552000 KMT2DO14686 5537 aa2.64□□□□□ -1.99
HOXB3-213ENST00000552000 SOSTDC1Q6X4U4 206 aa2.64□□□□□ -1.99
HOXB3-213ENST00000552000 Q96NJ1 140 aa2.64□□□□□ -1.99
HOXB3-213ENST00000552000 TRAV12-1A0A0B4J245 112 aa2.63□□□□□ -1.99
HOXB3-213ENST00000552000 COX7BP24311 80 aa2.63□□□□□ -1.99
HOXB3-213ENST00000552000 OR13C6PQ8NH95 151 aa2.63□□□□□ -1.99
HOXB3-213ENST00000552000 C18orf32Q8TCD1 76 aa2.63□□□□□ -1.99
HOXB3-213ENST00000552000 SEC11CQ9BY50 192 aa2.63□□□□□ -1.99
HOXB3-213ENST00000552000 LEPROTO15243 131 aa2.62□□□□□ -1.99
HOXB3-213ENST00000552000 ELOF1P60002 83 aaKnown RBP2.62□□□□□ -1.99
HOXB3-213ENST00000552000 RHEBQ15382 184 aa2.62□□□□□ -1.99
HOXB3-213ENST00000552000 CAMK2N1Q7Z7J9 78 aa2.62□□□□□ -1.99
HOXB3-213ENST00000552000 IFI27L1Q96BM0 104 aa2.62□□□□□ -1.99
HOXB3-213ENST00000552000 A8MUU9 505 aa2.61□□□□□ -1.99
HOXB3-213ENST00000552000 J3QQQ9 107 aa2.61□□□□□ -1.99
HOXB3-213ENST00000552000 S100PP25815 95 aa2.61□□□□□ -1.99
HOXB3-213ENST00000552000 IGFL1Q6UW32 110 aa2.61□□□□□ -1.99
HOXB3-213ENST00000552000 CEND1Q8N111 149 aa2.61□□□□□ -1.99
HOXB3-213ENST00000552000 IGLV5-48A0A075B6I7 105 aa2.6□□□□□ -1.99
HOXB3-213ENST00000552000 NMUP48645 174 aa2.6□□□□□ -1.99
HOXB3-213ENST00000552000 PMAIP1Q13794 54 aa2.6□□□□□ -1.99
HOXB3-213ENST00000552000 BATFQ16520 125 aa2.6□□□□□ -1.99
HOXB3-213ENST00000552000 SMIM20Q8N5G0 67 aa2.6□□□□□ -1.99
HOXB3-213ENST00000552000 ANAPC13Q9BS18 74 aa2.6□□□□□ -1.99
HOXB3-213ENST00000552000 TRBV7-7A0A0K0K1E9 115 aa2.59□□□□□ -1.99
HOXB3-213ENST00000552000 NDUFAF8A1L188 74 aa2.59□□□□□ -1.99
HOXB3-213ENST00000552000 KRTAP16-1A8MUX0 517 aa2.59□□□□□ -1.99
HOXB3-213ENST00000552000 HRES1P13985 223 aa2.59□□□□□ -1.99
HOXB3-213ENST00000552000 MP68P56378 58 aa2.59□□□□□ -1.99
HOXB3-213ENST00000552000 SPANXDQ9BXN6 97 aa2.59□□□□□ -1.99
HOXB3-213ENST00000552000 SPANXCQ9NY87 97 aa2.59□□□□□ -1.99
HOXB3-213ENST00000552000 F8WEM9 126 aa2.58□□□□□ -2
HOXB3-213ENST00000552000 TSTD3H0UI37 97 aa2.58□□□□□ -2
HOXB3-213ENST00000552000 SCGB1C2P0DMR2 95 aa2.58□□□□□ -2
HOXB3-213ENST00000552000 LINC00308Q8TCZ7 52 aa2.58□□□□□ -2
HOXB3-213ENST00000552000 YPEL4Q96NS1 127 aa2.58□□□□□ -2
HOXB3-213ENST00000552000 TRAPPC1Q9Y5R8 145 aa2.58□□□□□ -2
HOXB3-213ENST00000552000 LST1O00453 97 aa2.57□□□□□ -2
HOXB3-213ENST00000552000 TRBV7-6A0A0J9YX20 115 aa2.56□□□□□ -2
HOXB3-213ENST00000552000 Q6JHZ5 121 aa2.56□□□□□ -2
HOXB3-213ENST00000552000 PMCHL2Q9BQD1 86 aa2.56□□□□□ -2
HOXB3-213ENST00000552000 A8MWP4 228 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms