RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 H3BUA1 57 aa2.6□□□□□ -1.99
CPSF6-206ENST00000550987 ERC2-IT1O76042 136 aa2.6□□□□□ -1.99
CPSF6-206ENST00000550987 KRTAP10-1P60331 282 aa2.6□□□□□ -1.99
CPSF6-206ENST00000550987 PIGYQ3MUY2 71 aa2.6□□□□□ -1.99
CPSF6-206ENST00000550987 C9orf116Q5BN46 136 aaPredicted RBP2.6□□□□□ -1.99
CPSF6-206ENST00000550987 S100A7L2Q5SY68 101 aa2.6□□□□□ -1.99
CPSF6-206ENST00000550987 C18orf32Q8TCD1 76 aa2.6□□□□□ -1.99
CPSF6-206ENST00000550987 LINC01600Q96MT4 127 aa2.6□□□□□ -1.99
CPSF6-206ENST00000550987 NXT2Q9NPJ8 142 aaKnown RBP2.6□□□□□ -1.99
CPSF6-206ENST00000550987 PSORS1C2Q9UIG4 136 aa2.6□□□□□ -1.99
CPSF6-206ENST00000550987 TRAV10A0A0B4J240 114 aa2.59□□□□□ -1.99
CPSF6-206ENST00000550987 TMEM30CPA0ZSE6 113 aa2.59□□□□□ -1.99
CPSF6-206ENST00000550987 PRH1P02810 166 aa2.59□□□□□ -1.99
CPSF6-206ENST00000550987 APELAP0DMC3 54 aa2.59□□□□□ -1.99
CPSF6-206ENST00000550987 KRTAP10-4P60372 401 aaPredicted RBP2.59□□□□□ -1.99
CPSF6-206ENST00000550987 RPL39P5Q59GN2 51 aa2.59□□□□□ -1.99
CPSF6-206ENST00000550987 NMSQ5H8A3 153 aa2.59□□□□□ -1.99
CPSF6-206ENST00000550987 CYP2G1PQ6ZSU1 146 aa2.59□□□□□ -1.99
CPSF6-206ENST00000550987 ZNF833PQ6ZTB9 187 aa2.59□□□□□ -1.99
CPSF6-206ENST00000550987 TIMM21Q9BVV7 248 aa2.59□□□□□ -1.99
CPSF6-206ENST00000550987 DSTQ03001 7570 aaKnown RBP2.58□□□□□ -2
CPSF6-206ENST00000550987 DEFB131BA0A096LNP1 70 aa2.58□□□□□ -2
CPSF6-206ENST00000550987 F2Z2F3 143 aa2.58□□□□□ -2
CPSF6-206ENST00000550987 H3BUT2 72 aa2.58□□□□□ -2
CPSF6-206ENST00000550987 J3QRE1 110 aa2.58□□□□□ -2
CPSF6-206ENST00000550987 SAA2P0DJI9 122 aaPredicted RBP2.58□□□□□ -2
CPSF6-206ENST00000550987 DEFA4P12838 97 aa2.58□□□□□ -2
CPSF6-206ENST00000550987 MUC21A0A140T8X8 626 aa2.57□□□□□ -2
CPSF6-206ENST00000550987 FAM223BA6NKX1 122 aa2.57□□□□□ -2
CPSF6-206ENST00000550987 ERHP84090 104 aaKnown RBP2.57□□□□□ -2
CPSF6-206ENST00000550987 WFDC2Q14508 124 aa2.57□□□□□ -2
CPSF6-206ENST00000550987 FAM223AQ8IWN6 122 aa2.57□□□□□ -2
CPSF6-206ENST00000550987 CDC42SE1Q9NRR8 79 aa2.57□□□□□ -2
CPSF6-206ENST00000550987 TRGV4A0A0C4DH28 118 aa2.56□□□□□ -2
CPSF6-206ENST00000550987 C7orf77A4D0Y5 90 aa2.56□□□□□ -2
CPSF6-206ENST00000550987 KLKP1Q107X0 134 aa2.56□□□□□ -2
CPSF6-206ENST00000550987 PSMG4Q5JS54 123 aa2.56□□□□□ -2
CPSF6-206ENST00000550987 LINC00643Q86TS7 51 aa2.56□□□□□ -2
CPSF6-206ENST00000550987 UBE2DNLQ8IWF7 75 aa2.56□□□□□ -2
CPSF6-206ENST00000550987 FAM167A-AS1Q96KT0 104 aa2.56□□□□□ -2
CPSF6-206ENST00000550987 TRAV23DV6A0A075B6W5 121 aa2.55□□□□□ -2
CPSF6-206ENST00000550987 TRAV12-1A0A0B4J245 112 aa2.55□□□□□ -2
CPSF6-206ENST00000550987 UMAD1C9J7I0 102 aa2.55□□□□□ -2
CPSF6-206ENST00000550987 HCG22E2RYF7 251 aa2.55□□□□□ -2
CPSF6-206ENST00000550987 SIX6O95475 246 aa2.55□□□□□ -2
CPSF6-206ENST00000550987 COX6CP09669 75 aa2.55□□□□□ -2
CPSF6-206ENST00000550987 SMIM13P0DJ93 91 aa2.55□□□□□ -2
CPSF6-206ENST00000550987 MIR22HGQ0VDD5 57 aa2.55□□□□□ -2
CPSF6-206ENST00000550987 TMEM170BQ5T4T1 132 aa2.55□□□□□ -2
CPSF6-206ENST00000550987 CFAP126Q5VTH2 177 aa2.55□□□□□ -2
CPSF6-206ENST00000550987 PP632Q6XCG6 107 aa2.55□□□□□ -2
CPSF6-206ENST00000550987 ZNF818PQ6ZRF7 136 aa2.55□□□□□ -2
CPSF6-206ENST00000550987 PRO1854Q9UHT4 67 aa2.55□□□□□ -2
CPSF6-206ENST00000550987 C22orf24Q9Y442 160 aa2.55□□□□□ -2
CPSF6-206ENST00000550987 NBDYA0A0U1RRE5 68 aa2.54□□□□□ -2
CPSF6-206ENST00000550987 H7BZZ5 65 aa2.54□□□□□ -2
CPSF6-206ENST00000550987 C10orf55Q5SWW7 151 aa2.54□□□□□ -2
CPSF6-206ENST00000550987 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.54□□□□□ -2
CPSF6-206ENST00000550987 SPTSSBQ8NFR3 76 aa2.54□□□□□ -2
CPSF6-206ENST00000550987 LIMD2Q9BT23 127 aa2.54□□□□□ -2
CPSF6-206ENST00000550987 MANBALQ9NQG1 85 aa2.54□□□□□ -2
CPSF6-206ENST00000550987 LINC00474Q9P2X8 69 aa2.54□□□□□ -2
CPSF6-206ENST00000550987 IGKV3-7A0A075B6H7 116 aa2.53□□□□□ -2
CPSF6-206ENST00000550987 UBE2D3P61077 147 aa2.53□□□□□ -2
CPSF6-206ENST00000550987 SNRPGP62308 76 aaKnown RBP2.53□□□□□ -2
CPSF6-206ENST00000550987 UBE2D2P62837 147 aa2.53□□□□□ -2
CPSF6-206ENST00000550987 LCE3AQ5TA76 89 aa2.53□□□□□ -2
CPSF6-206ENST00000550987 Q9BRP9 147 aa2.53□□□□□ -2
CPSF6-206ENST00000550987 ABRACLQ9P1F3 81 aa2.53□□□□□ -2
CPSF6-206ENST00000550987 TRBV7-3A0A075B6L6 115 aa2.52□□□□□ -2.01
CPSF6-206ENST00000550987 TRBV10-1A0A0K0K1A3 114 aa2.52□□□□□ -2.01
CPSF6-206ENST00000550987 DEFB131AP59861 70 aa2.52□□□□□ -2.01
CPSF6-206ENST00000550987 KLK9Q2XQG4 91 aa2.52□□□□□ -2.01
CPSF6-206ENST00000550987 ODF3Q96PU9 254 aa2.52□□□□□ -2.01
CPSF6-206ENST00000550987 KLK9Q9UKQ9 250 aa2.52□□□□□ -2.01
CPSF6-206ENST00000550987 IGHV3-33P01772 117 aa2.51□□□□□ -2.01
CPSF6-206ENST00000550987 SPART-AS1P0CW21 52 aa2.51□□□□□ -2.01
CPSF6-206ENST00000550987 HTN3P15516 51 aa2.51□□□□□ -2.01
CPSF6-206ENST00000550987 ELOBQ15370 118 aa2.51□□□□□ -2.01
CPSF6-206ENST00000550987 C6orf201Q7Z4U5 140 aa2.51□□□□□ -2.01
CPSF6-206ENST00000550987 DEFB107AQ8IZN7 70 aa2.51□□□□□ -2.01
CPSF6-206ENST00000550987 RHPN1-AS1Q9BWJ2 59 aa2.51□□□□□ -2.01
CPSF6-206ENST00000550987 TMEM14BQ9NUH8 114 aa2.51□□□□□ -2.01
CPSF6-206ENST00000550987 HIGD1BQ9P298 99 aa2.51□□□□□ -2.01
CPSF6-206ENST00000550987 TMSB15BA0A087X1C1 80 aa2.5□□□□□ -2.01
CPSF6-206ENST00000550987 NDUFA4O00483 81 aa2.5□□□□□ -2.01
CPSF6-206ENST00000550987 SFTA3P0C7M3 94 aa2.5□□□□□ -2.01
CPSF6-206ENST00000550987 XAF1Q6GPH4 301 aa2.5□□□□□ -2.01
CPSF6-206ENST00000550987 LYPD5Q6UWN5 251 aa2.5□□□□□ -2.01
CPSF6-206ENST00000550987 Q8TAT8 98 aa2.5□□□□□ -2.01
CPSF6-206ENST00000550987 DMAC1Q96GE9 116 aa2.5□□□□□ -2.01
CPSF6-206ENST00000550987 TXNDC17Q9BRA2 123 aa2.5□□□□□ -2.01
CPSF6-206ENST00000550987 TRBV25-1A0A075B6N4 114 aa2.49□□□□□ -2.01
CPSF6-206ENST00000550987 TRAV12-3A0A0B4J271 114 aa2.49□□□□□ -2.01
CPSF6-206ENST00000550987 PDE6HQ13956 83 aa2.49□□□□□ -2.01
CPSF6-206ENST00000550987 KRTAP26-1Q6PEX3 210 aa2.49□□□□□ -2.01
CPSF6-206ENST00000550987 LINC00846Q9NV44 126 aa2.49□□□□□ -2.01
CPSF6-206ENST00000550987 MUC5BQ9HC84 5762 aaPredicted RBP2.49□□□□□ -2.01
CPSF6-206ENST00000550987 H3BRN7 92 aa2.48□□□□□ -2.01
CPSF6-206ENST00000550987 CCL18P55774 89 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms