RNA–Protein interactions for RNA: ENST00000550587.5

DEPDC4-209, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,165 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-209ENST00000550587 H3BMG7 143 aa3.82□□□□□ -1.8
DEPDC4-209ENST00000550587 TRACP01848 142 aa3.82□□□□□ -1.8
DEPDC4-209ENST00000550587 SPRR1AP35321 89 aa3.82□□□□□ -1.8
DEPDC4-209ENST00000550587 ELOF1P60002 83 aaKnown RBP3.82□□□□□ -1.8
DEPDC4-209ENST00000550587 REG3GQ6UW15 175 aa3.82□□□□□ -1.8
DEPDC4-209ENST00000550587 LINC00575Q6W349 94 aa3.82□□□□□ -1.8
DEPDC4-209ENST00000550587 PHF5AQ7RTV0 110 aaKnown RBP3.82□□□□□ -1.8
DEPDC4-209ENST00000550587 CLEC2BQ92478 149 aa3.82□□□□□ -1.8
DEPDC4-209ENST00000550587 HMCN2Q8NDA2 5059 aa3.81□□□□□ -1.8
DEPDC4-209ENST00000550587 F8W1H4 67 aa3.81□□□□□ -1.8
DEPDC4-209ENST00000550587 COX7BP24311 80 aa3.81□□□□□ -1.8
DEPDC4-209ENST00000550587 FAM218AQ96MZ4 157 aa3.81□□□□□ -1.8
DEPDC4-209ENST00000550587 ETDCA0A1B0GVM5 59 aa3.8□□□□□ -1.8
DEPDC4-209ENST00000550587 hADV29S1A0JD25 119 aa3.8□□□□□ -1.8
DEPDC4-209ENST00000550587 SLC25A20O43772 301 aa3.8□□□□□ -1.8
DEPDC4-209ENST00000550587 UBE2BP63146 152 aa3.8□□□□□ -1.8
DEPDC4-209ENST00000550587 H0Y9J4 135 aa3.79□□□□□ -1.8
DEPDC4-209ENST00000550587 Q6ZRX8 168 aa3.79□□□□□ -1.8
DEPDC4-209ENST00000550587 KRTAP11-1Q8IUC1 163 aa3.79□□□□□ -1.8
DEPDC4-209ENST00000550587 LINC01600Q96MT4 127 aa3.79□□□□□ -1.8
DEPDC4-209ENST00000550587 DHRS4-AS1Q9P1J3 65 aa3.79□□□□□ -1.8
DEPDC4-209ENST00000550587 PRO0461Q9UI25 63 aa3.79□□□□□ -1.8
DEPDC4-209ENST00000550587 MYCBP2O75592 4640 aa3.79□□□□□ -1.8
DEPDC4-209ENST00000550587 RNF213Q63HN8 5207 aa3.78□□□□□ -1.8
DEPDC4-209ENST00000550587 C9JAW5 83 aa3.78□□□□□ -1.8
DEPDC4-209ENST00000550587 DNAL4O96015 105 aa3.78□□□□□ -1.8
DEPDC4-209ENST00000550587 BAALC-AS2P0C853 105 aa3.78□□□□□ -1.8
DEPDC4-209ENST00000550587 KRTAP10-4P60372 401 aaPredicted RBP3.78□□□□□ -1.8
DEPDC4-209ENST00000550587 FAT1Q14517 4588 aa3.77□□□□□ -1.81
DEPDC4-209ENST00000550587 H3BQ85 93 aa3.77□□□□□ -1.81
DEPDC4-209ENST00000550587 H3BT86 120 aa3.77□□□□□ -1.81
DEPDC4-209ENST00000550587 BCE1O60756 84 aa3.77□□□□□ -1.81
DEPDC4-209ENST00000550587 OCIAD2Q56VL3 154 aa3.77□□□□□ -1.81
DEPDC4-209ENST00000550587 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.77□□□□□ -1.81
DEPDC4-209ENST00000550587 FAM19A1Q7Z5A9 133 aa3.77□□□□□ -1.81
DEPDC4-209ENST00000550587 ANKRD29Q8N6D5 301 aa3.77□□□□□ -1.81
DEPDC4-209ENST00000550587 Q9BRP9 147 aa3.77□□□□□ -1.81
DEPDC4-209ENST00000550587 ORMDL1Q9P0S3 153 aa3.77□□□□□ -1.81
DEPDC4-209ENST00000550587 PSORS1C2Q9UIG4 136 aa3.77□□□□□ -1.81
DEPDC4-209ENST00000550587 VPS13BQ7Z7G8 4022 aa3.76□□□□□ -1.81
DEPDC4-209ENST00000550587 TMEM256-PLSCR3K7ERE1 68 aa3.76□□□□□ -1.81
DEPDC4-209ENST00000550587 Q6ZQY7 126 aa3.76□□□□□ -1.81
DEPDC4-209ENST00000550587 KRTAP13-1Q8IUC0 172 aa3.76□□□□□ -1.81
DEPDC4-209ENST00000550587 IGKV2D-30A0A075B6S6 120 aa3.75□□□□□ -1.81
DEPDC4-209ENST00000550587 UBE2AP49459 152 aa3.75□□□□□ -1.81
DEPDC4-209ENST00000550587 C1orf137Q5JT78 98 aa3.75□□□□□ -1.81
DEPDC4-209ENST00000550587 MTURNQ8N3F0 131 aa3.75□□□□□ -1.81
DEPDC4-209ENST00000550587 SMCR5Q8TEV8 140 aa3.75□□□□□ -1.81
DEPDC4-209ENST00000550587 ZNF861PO60384 105 aa3.74□□□□□ -1.81
DEPDC4-209ENST00000550587 ERC2-IT1O76042 136 aa3.74□□□□□ -1.81
DEPDC4-209ENST00000550587 PRLHP81277 87 aa3.74□□□□□ -1.81
DEPDC4-209ENST00000550587 ETDBQ3ZM63 59 aa3.74□□□□□ -1.81
DEPDC4-209ENST00000550587 TEN1Q86WV5 123 aa3.74□□□□□ -1.81
DEPDC4-209ENST00000550587 PPDPFLQ8WWR9 84 aa3.74□□□□□ -1.81
DEPDC4-209ENST00000550587 IGLV5-48A0A075B6I7 105 aa3.73□□□□□ -1.81
DEPDC4-209ENST00000550587 IGLV7-43P04211 117 aa3.73□□□□□ -1.81
DEPDC4-209ENST00000550587 LINC01547P58512 204 aaPredicted RBP3.73□□□□□ -1.81
DEPDC4-209ENST00000550587 HIGD2AQ9BW72 106 aa3.73□□□□□ -1.81
DEPDC4-209ENST00000550587 TEX49A0A1B0GTD5 131 aa3.72□□□□□ -1.81
DEPDC4-209ENST00000550587 MT1HL1P0DM35 61 aa3.72□□□□□ -1.81
DEPDC4-209ENST00000550587 SPINK6Q6UWN8 80 aa3.72□□□□□ -1.81
DEPDC4-209ENST00000550587 Q8N377 158 aa3.72□□□□□ -1.81
DEPDC4-209ENST00000550587 OBSCN-AS1Q96MR7 158 aa3.72□□□□□ -1.81
DEPDC4-209ENST00000550587 JMJD7-PLA2G4BH0Y9G9 81 aa3.71□□□□□ -1.82
DEPDC4-209ENST00000550587 SPRR1BP22528 89 aa3.71□□□□□ -1.82
DEPDC4-209ENST00000550587 NDUFV3P56181 108 aaKnown RBP3.71□□□□□ -1.82
DEPDC4-209ENST00000550587 ST20-AS1Q8NBB2 130 aa3.71□□□□□ -1.82
DEPDC4-209ENST00000550587 DEFB105AQ8NG35 78 aa3.71□□□□□ -1.82
DEPDC4-209ENST00000550587 LCE1EQ5T753 118 aa3.7□□□□□ -1.82
DEPDC4-209ENST00000550587 LAMTOR3Q9UHA4 124 aa3.7□□□□□ -1.82
DEPDC4-209ENST00000550587 ZNF706Q9Y5V0 76 aaPredicted RBP3.7□□□□□ -1.82
DEPDC4-209ENST00000550587 RBM3P98179 157 aaKnown RBP3.69□□□□□ -1.82
DEPDC4-209ENST00000550587 GAGE2AQ6NT46 116 aa3.69□□□□□ -1.82
DEPDC4-209ENST00000550587 SMIM29Q86T20 159 aa3.69□□□□□ -1.82
DEPDC4-209ENST00000550587 SPRR4Q96PI1 79 aa3.69□□□□□ -1.82
DEPDC4-209ENST00000550587 J3QR89 54 aa3.68□□□□□ -1.82
DEPDC4-209ENST00000550587 PDE6GP18545 87 aa3.68□□□□□ -1.82
DEPDC4-209ENST00000550587 LINC00483Q53H64 154 aa3.68□□□□□ -1.82
DEPDC4-209ENST00000550587 SVIPQ8NHG7 77 aa3.68□□□□□ -1.82
DEPDC4-209ENST00000550587 IGLV8-61A0A075B6I0 122 aa3.67□□□□□ -1.82
DEPDC4-209ENST00000550587 LOC110117498A0A087WWA1 95 aa3.67□□□□□ -1.82
DEPDC4-209ENST00000550587 TRBV7-4A0A0J9YYF1 115 aa3.67□□□□□ -1.82
DEPDC4-209ENST00000550587 K7ERU9 68 aa3.67□□□□□ -1.82
DEPDC4-209ENST00000550587 DSCR8Q96T75 97 aa3.67□□□□□ -1.82
DEPDC4-209ENST00000550587 C14orf132Q9NPU4 83 aa3.67□□□□□ -1.82
DEPDC4-209ENST00000550587 F8WEM9 126 aa3.66□□□□□ -1.82
DEPDC4-209ENST00000550587 CCKP06307 115 aa3.66□□□□□ -1.82
DEPDC4-209ENST00000550587 KRTAP10-8P60410 259 aa3.66□□□□□ -1.82
DEPDC4-209ENST00000550587 C3orf22Q8N5N4 141 aa3.66□□□□□ -1.82
DEPDC4-209ENST00000550587 MUC2Q02817 5179 aa3.66□□□□□ -1.82
DEPDC4-209ENST00000550587 Q6JHZ5 121 aa3.65□□□□□ -1.83
DEPDC4-209ENST00000550587 Q6ZQT0 140 aa3.65□□□□□ -1.83
DEPDC4-209ENST00000550587 LRP1Q07954 4544 aaKnown RBP3.65□□□□□ -1.83
DEPDC4-209ENST00000550587 A0A0U1RQV1 116 aa3.64□□□□□ -1.83
DEPDC4-209ENST00000550587 A0A1B0GV72 72 aa3.64□□□□□ -1.83
DEPDC4-209ENST00000550587 FAM240AA0A1B0GVK7 77 aa3.64□□□□□ -1.83
DEPDC4-209ENST00000550587 A0A1B0GW54 56 aa3.64□□□□□ -1.83
DEPDC4-209ENST00000550587 ACYP1P07311 99 aa3.64□□□□□ -1.83
DEPDC4-209ENST00000550587 FAM229BQ4G0N7 80 aa3.64□□□□□ -1.83
DEPDC4-209ENST00000550587 KRTAP1-4P0C5Y4 121 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 156.2 ms