RNA–Protein interactions for RNA: ENST00000550069.1

PFDN5-209, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-209ENST00000550069 RYR3Q15413 4870 aa3.59□□□□□ -1.84
PFDN5-209ENST00000550069 A8MUN3 132 aa3.58□□□□□ -1.84
PFDN5-209ENST00000550069 RTL8CO15255 209 aa3.58□□□□□ -1.84
PFDN5-209ENST00000550069 PSCAO43653 123 aa3.58□□□□□ -1.84
PFDN5-209ENST00000550069 NREPQ16612 68 aa3.58□□□□□ -1.84
PFDN5-209ENST00000550069 FAM229BQ4G0N7 80 aa3.58□□□□□ -1.84
PFDN5-209ENST00000550069 Q6ZRN7 208 aaPredicted RBP3.58□□□□□ -1.84
PFDN5-209ENST00000550069 WFDC10BQ8IUB3 73 aa3.58□□□□□ -1.84
PFDN5-209ENST00000550069 LINC00308Q8TCZ7 52 aa3.58□□□□□ -1.84
PFDN5-209ENST00000550069 STARD9Q9P2P6 4700 aa3.57□□□□□ -1.84
PFDN5-209ENST00000550069 SYCNQ0VAF6 134 aa3.57□□□□□ -1.84
PFDN5-209ENST00000550069 ASB16-AS1Q495Z4 193 aa3.57□□□□□ -1.84
PFDN5-209ENST00000550069 A0A087WZ39 114 aa3.56□□□□□ -1.84
PFDN5-209ENST00000550069 TRAV22A0A0B4J277 110 aa3.56□□□□□ -1.84
PFDN5-209ENST00000550069 A0A1B0GVY2 172 aa3.56□□□□□ -1.84
PFDN5-209ENST00000550069 A6NN06 94 aa3.56□□□□□ -1.84
PFDN5-209ENST00000550069 ANGP03950 147 aaKnown RBP3.56□□□□□ -1.84
PFDN5-209ENST00000550069 KIAA0087Q14695 138 aa3.56□□□□□ -1.84
PFDN5-209ENST00000550069 NTM-AS1Q6ZSK4 140 aa3.56□□□□□ -1.84
PFDN5-209ENST00000550069 IGLV7-46A0A075B6I9 117 aa3.55□□□□□ -1.84
PFDN5-209ENST00000550069 A0A087WTM6 91 aa3.55□□□□□ -1.84
PFDN5-209ENST00000550069 M0R2N4 97 aa3.55□□□□□ -1.84
PFDN5-209ENST00000550069 NDUFB1O75438 58 aa3.55□□□□□ -1.84
PFDN5-209ENST00000550069 CDK2AP2O75956 126 aa3.55□□□□□ -1.84
PFDN5-209ENST00000550069 MP68P56378 58 aa3.55□□□□□ -1.84
PFDN5-209ENST00000550069 DSCR10P59022 87 aa3.55□□□□□ -1.84
PFDN5-209ENST00000550069 REG3AQ06141 175 aa3.55□□□□□ -1.84
PFDN5-209ENST00000550069 C20orf203Q8NBC4 194 aa3.55□□□□□ -1.84
PFDN5-209ENST00000550069 RPL39LQ96EH5 51 aaKnown RBP3.55□□□□□ -1.84
PFDN5-209ENST00000550069 FAM218AQ96MZ4 157 aa3.55□□□□□ -1.84
PFDN5-209ENST00000550069 LINC00167Q96N53 147 aa3.55□□□□□ -1.84
PFDN5-209ENST00000550069 KLK12Q9UKR0 248 aa3.55□□□□□ -1.84
PFDN5-209ENST00000550069 LOC110117498A0A087WWA1 95 aa3.54□□□□□ -1.84
PFDN5-209ENST00000550069 LRCOL1A6NCL2 159 aa3.54□□□□□ -1.84
PFDN5-209ENST00000550069 FAM19A3Q7Z5A8 133 aa3.54□□□□□ -1.84
PFDN5-209ENST00000550069 ZNF625Q96I27 306 aaPredicted RBP3.54□□□□□ -1.84
PFDN5-209ENST00000550069 Q9HAA7 133 aa3.54□□□□□ -1.84
PFDN5-209ENST00000550069 LYSTQ99698 3801 aa3.54□□□□□ -1.84
PFDN5-209ENST00000550069 IGLV4-3A0A075B6K6 122 aa3.53□□□□□ -1.84
PFDN5-209ENST00000550069 IGHV3-64A0A075B6Q5 118 aa3.53□□□□□ -1.84
PFDN5-209ENST00000550069 A0A0J9YXV3 536 aa3.53□□□□□ -1.84
PFDN5-209ENST00000550069 HCG22E2RYF7 251 aa3.53□□□□□ -1.84
PFDN5-209ENST00000550069 CHKB-CPT1BH3BT56 60 aa3.53□□□□□ -1.84
PFDN5-209ENST00000550069 BPY2O14599 106 aa3.53□□□□□ -1.84
PFDN5-209ENST00000550069 NCR3O14931 201 aa3.53□□□□□ -1.84
PFDN5-209ENST00000550069 ELOF1P60002 83 aaKnown RBP3.53□□□□□ -1.84
PFDN5-209ENST00000550069 LINC01554Q52M75 96 aa3.53□□□□□ -1.84
PFDN5-209ENST00000550069 MIR7-3HGQ8N6C7 128 aa3.53□□□□□ -1.84
PFDN5-209ENST00000550069 Q8N814 137 aa3.53□□□□□ -1.84
PFDN5-209ENST00000550069 CDC42SE2Q9NRR3 84 aa3.53□□□□□ -1.84
PFDN5-209ENST00000550069 CDC42SE1Q9NRR8 79 aa3.53□□□□□ -1.84
PFDN5-209ENST00000550069 IGKV2D-24A0A075B6R9 120 aa3.52□□□□□ -1.85
PFDN5-209ENST00000550069 KRTAP9-6A8MVA2 160 aa3.52□□□□□ -1.85
PFDN5-209ENST00000550069 C16orf90A8MZG2 172 aa3.52□□□□□ -1.85
PFDN5-209ENST00000550069 LECT2O14960 151 aa3.52□□□□□ -1.85
PFDN5-209ENST00000550069 PSPHP1O15172 72 aa3.52□□□□□ -1.85
PFDN5-209ENST00000550069 CNBPP62633 177 aaKnown RBP3.52□□□□□ -1.85
PFDN5-209ENST00000550069 RPL39P62891 51 aaKnown RBP3.52□□□□□ -1.85
PFDN5-209ENST00000550069 SPTSSBQ8NFR3 76 aa3.52□□□□□ -1.85
PFDN5-209ENST00000550069 HAMPP81172 84 aa3.51□□□□□ -1.85
PFDN5-209ENST00000550069 Q5VV11 94 aa3.51□□□□□ -1.85
PFDN5-209ENST00000550069 C1orf64Q8NEQ6 169 aa3.51□□□□□ -1.85
PFDN5-209ENST00000550069 ALMS1Q8TCU4 4167 aa3.5□□□□□ -1.85
PFDN5-209ENST00000550069 DYNC2H1Q8NCM8 4307 aaKnown RBP3.5□□□□□ -1.85
PFDN5-209ENST00000550069 IGLV4-60A0A075B6I1 120 aa3.5□□□□□ -1.85
PFDN5-209ENST00000550069 GVQW2A0A096LPI5 108 aaPredicted RBP3.5□□□□□ -1.85
PFDN5-209ENST00000550069 LINC00959A0A1B0GUT2 108 aa3.5□□□□□ -1.85
PFDN5-209ENST00000550069 H0Y9J4 135 aa3.5□□□□□ -1.85
PFDN5-209ENST00000550069 KRTAP26-1Q6PEX3 210 aa3.5□□□□□ -1.85
PFDN5-209ENST00000550069 Q8NBF4 154 aa3.5□□□□□ -1.85
PFDN5-209ENST00000550069 IGLV10-54A0A075B6I4 117 aa3.49□□□□□ -1.85
PFDN5-209ENST00000550069 LINC00313P59037 77 aa3.49□□□□□ -1.85
PFDN5-209ENST00000550069 C9orf116Q5BN46 136 aaPredicted RBP3.49□□□□□ -1.85
PFDN5-209ENST00000550069 CASC2Q6XLA1 102 aa3.49□□□□□ -1.85
PFDN5-209ENST00000550069 Q6ZQT0 140 aa3.49□□□□□ -1.85
PFDN5-209ENST00000550069 Q6ZSA8 131 aa3.49□□□□□ -1.85
PFDN5-209ENST00000550069 C9orf163Q8N9P6 203 aa3.49□□□□□ -1.85
PFDN5-209ENST00000550069 CHCHD10Q8WYQ3 142 aaPredicted RBP3.49□□□□□ -1.85
PFDN5-209ENST00000550069 OCR1Q9BZK8 76 aa3.49□□□□□ -1.85
PFDN5-209ENST00000550069 KMT2AQ03164 3969 aa3.49□□□□□ -1.85
PFDN5-209ENST00000550069 PLECQ15149 4684 aaKnown RBP3.48□□□□□ -1.85
PFDN5-209ENST00000550069 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.48□□□□□ -1.85
PFDN5-209ENST00000550069 IGHV3OR16-9A0A0B4J2B5 98 aa3.48□□□□□ -1.85
PFDN5-209ENST00000550069 LOC101927531A0A1B0GV80 90 aa3.48□□□□□ -1.85
PFDN5-209ENST00000550069 IGKV2-29A2NJV5 120 aaPredicted RBP3.48□□□□□ -1.85
PFDN5-209ENST00000550069 A6NED7 52 aa3.48□□□□□ -1.85
PFDN5-209ENST00000550069 SMIM11BQ8TCY0 68 aa3.48□□□□□ -1.85
PFDN5-209ENST00000550069 Q9BRP9 147 aa3.48□□□□□ -1.85
PFDN5-209ENST00000550069 SND1-IT1Q9HBX3 110 aa3.48□□□□□ -1.85
PFDN5-209ENST00000550069 EPPK1P58107 5090 aaKnown RBP3.48□□□□□ -1.85
PFDN5-209ENST00000550069 BIRC6Q9NR09 4857 aa3.48□□□□□ -1.85
PFDN5-209ENST00000550069 DNAH6Q9C0G6 4158 aa3.48□□□□□ -1.85
PFDN5-209ENST00000550069 A0A1B0GW54 56 aa3.46□□□□□ -1.86
PFDN5-209ENST00000550069 TLX1NBP0CAT3 122 aa3.46□□□□□ -1.86
PFDN5-209ENST00000550069 C9orf129Q5T035 196 aaKnown RBP3.46□□□□□ -1.86
PFDN5-209ENST00000550069 SCXQ7RTU7 201 aa3.46□□□□□ -1.86
PFDN5-209ENST00000550069 Q8IZM0 81 aa3.46□□□□□ -1.86
PFDN5-209ENST00000550069 Q8N377 158 aa3.46□□□□□ -1.86
PFDN5-209ENST00000550069 SPANXA2-OT1Q8N9U9 137 aa3.46□□□□□ -1.86
PFDN5-209ENST00000550069 PRR15LQ9BU68 103 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms