RNA–Protein interactions for RNA: ENST00000549139.5

CHMP1A-206, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-206ENST00000549139 CRCT1Q9UGL9 99 aa8.94□□□□□ -0.98
CHMP1A-206ENST00000549139 H7C2G1 150 aa8.93□□□□□ -0.98
CHMP1A-206ENST00000549139 Q1RN00 199 aa8.93□□□□□ -0.98
CHMP1A-206ENST00000549139 Q8N377 158 aa8.93□□□□□ -0.98
CHMP1A-206ENST00000549139 PRO1854Q9UHT4 67 aa8.93□□□□□ -0.98
CHMP1A-206ENST00000549139 TPRXLQ17RH7 258 aa8.92□□□□□ -0.98
CHMP1A-206ENST00000549139 H0YGX0 51 aa8.9□□□□□ -0.98
CHMP1A-206ENST00000549139 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.9□□□□□ -0.98
CHMP1A-206ENST00000549139 Q6ZQY7 126 aa8.9□□□□□ -0.98
CHMP1A-206ENST00000549139 CDIP1Q9H305 208 aa8.9□□□□□ -0.98
CHMP1A-206ENST00000549139 PRO1933Q9H354 126 aa8.9□□□□□ -0.98
CHMP1A-206ENST00000549139 FP248Q71RG6 208 aaPredicted RBP8.89□□□□□ -0.99
CHMP1A-206ENST00000549139 IGLV7-46A0A075B6I9 117 aa8.88□□□□□ -0.99
CHMP1A-206ENST00000549139 SNCGO76070 127 aa8.87□□□□□ -0.99
CHMP1A-206ENST00000549139 CD164Q04900 197 aa8.87□□□□□ -0.99
CHMP1A-206ENST00000549139 PPDPFLQ8WWR9 84 aa8.86□□□□□ -0.99
CHMP1A-206ENST00000549139 SMIM6P0DI80 62 aa8.84□□□□□ -0.99
CHMP1A-206ENST00000549139 HRCT1Q6UXD1 115 aa8.84□□□□□ -0.99
CHMP1A-206ENST00000549139 A0A1B0GX51 115 aa8.83□□□□□ -1
CHMP1A-206ENST00000549139 F8WEM9 126 aa8.83□□□□□ -1
CHMP1A-206ENST00000549139 OCIAD2Q56VL3 154 aa8.83□□□□□ -1
CHMP1A-206ENST00000549139 FAM218AQ96MZ4 157 aa8.83□□□□□ -1
CHMP1A-206ENST00000549139 LIMD2Q9BT23 127 aa8.83□□□□□ -1
CHMP1A-206ENST00000549139 IGLV8-61A0A075B6I0 122 aa8.81□□□□□ -1
CHMP1A-206ENST00000549139 TRIAP1O43715 76 aa8.81□□□□□ -1
CHMP1A-206ENST00000549139 K7ERJ3 54 aa8.8□□□□□ -1
CHMP1A-206ENST00000549139 SNHG12Q9BXW3 62 aa8.8□□□□□ -1
CHMP1A-206ENST00000549139 Q6JHZ5 121 aa8.79□□□□□ -1
CHMP1A-206ENST00000549139 A0A0G2JQZ4 141 aa8.78□□□□□ -1
CHMP1A-206ENST00000549139 LOC105371267A0A1B0GV96 52 aa8.78□□□□□ -1
CHMP1A-206ENST00000549139 GHRHP01286 108 aa8.78□□□□□ -1
CHMP1A-206ENST00000549139 COX6CP09669 75 aa8.78□□□□□ -1
CHMP1A-206ENST00000549139 PSMB2P49721 201 aa8.78□□□□□ -1
CHMP1A-206ENST00000549139 Q5XG85 94 aa8.78□□□□□ -1
CHMP1A-206ENST00000549139 KRTAP4-1Q9BYQ7 146 aa8.77□□□□□ -1.01
CHMP1A-206ENST00000549139 KRTAP13-3Q3SY46 172 aa8.76□□□□□ -1.01
CHMP1A-206ENST00000549139 IGFL1Q6UW32 110 aa8.75□□□□□ -1.01
CHMP1A-206ENST00000549139 CLEC2BQ92478 149 aa8.75□□□□□ -1.01
CHMP1A-206ENST00000549139 ASB16-AS1Q495Z4 193 aa8.74□□□□□ -1.01
CHMP1A-206ENST00000549139 M0R143 59 aa8.73□□□□□ -1.01
CHMP1A-206ENST00000549139 NDUFV3P56181 108 aaKnown RBP8.73□□□□□ -1.01
CHMP1A-206ENST00000549139 TSTD3H0UI37 97 aa8.71□□□□□ -1.02
CHMP1A-206ENST00000549139 H3BQ85 93 aa8.7□□□□□ -1.02
CHMP1A-206ENST00000549139 TCL1BO95988 128 aa8.7□□□□□ -1.02
CHMP1A-206ENST00000549139 DNAL4O96015 105 aa8.7□□□□□ -1.02
CHMP1A-206ENST00000549139 H3BUT2 72 aa8.69□□□□□ -1.02
CHMP1A-206ENST00000549139 SCGB1C2P0DMR2 95 aa8.69□□□□□ -1.02
CHMP1A-206ENST00000549139 FABP2P12104 132 aa8.69□□□□□ -1.02
CHMP1A-206ENST00000549139 ORMDL1Q9P0S3 153 aa8.69□□□□□ -1.02
CHMP1A-206ENST00000549139 TRBV7-7A0A0K0K1E9 115 aa8.68□□□□□ -1.02
CHMP1A-206ENST00000549139 C1orf195Q5TG92 126 aa8.68□□□□□ -1.02
CHMP1A-206ENST00000549139 LCE2CQ5TA81 110 aa8.67□□□□□ -1.02
CHMP1A-206ENST00000549139 H3BMG7 143 aa8.66□□□□□ -1.02
CHMP1A-206ENST00000549139 TMEM256-PLSCR3K7ERE1 68 aa8.66□□□□□ -1.02
CHMP1A-206ENST00000549139 TRACP01848 142 aa8.66□□□□□ -1.02
CHMP1A-206ENST00000549139 Q6Q795 121 aa8.65□□□□□ -1.02
CHMP1A-206ENST00000549139 LST1O00453 97 aa8.64□□□□□ -1.03
CHMP1A-206ENST00000549139 TEN1Q86WV5 123 aa8.63□□□□□ -1.03
CHMP1A-206ENST00000549139 SEC61BP60468 96 aaKnown RBP8.61□□□□□ -1.03
CHMP1A-206ENST00000549139 UBE2V1Q13404 147 aa8.61□□□□□ -1.03
CHMP1A-206ENST00000549139 KRTAP19-2Q3LHN2 52 aa8.6□□□□□ -1.03
CHMP1A-206ENST00000549139 XP32Q5T750 250 aa8.6□□□□□ -1.03
CHMP1A-206ENST00000549139 ANKRD29Q8N6D5 301 aa8.58□□□□□ -1.04
CHMP1A-206ENST00000549139 SS18L2Q9UHA2 77 aa8.58□□□□□ -1.04
CHMP1A-206ENST00000549139 C9orf92A6NGG3 77 aa8.57□□□□□ -1.04
CHMP1A-206ENST00000549139 NAA38Q9BRA0 125 aaKnown RBP8.57□□□□□ -1.04
CHMP1A-206ENST00000549139 A0A1W2PNM2 257 aa8.56□□□□□ -1.04
CHMP1A-206ENST00000549139 ATXN8Q156A1 80 aa8.56□□□□□ -1.04
CHMP1A-206ENST00000549139 BATFQ16520 125 aa8.56□□□□□ -1.04
CHMP1A-206ENST00000549139 BAALC-AS2P0C853 105 aa8.55□□□□□ -1.04
CHMP1A-206ENST00000549139 MT1HP80294 61 aa8.55□□□□□ -1.04
CHMP1A-206ENST00000549139 A0A087WSZ3 146 aa8.54□□□□□ -1.04
CHMP1A-206ENST00000549139 TRBV7-4A0A0J9YYF1 115 aa8.53□□□□□ -1.04
CHMP1A-206ENST00000549139 LYRM7Q5U5X0 104 aa8.53□□□□□ -1.04
CHMP1A-206ENST00000549139 A0A1B0GV72 72 aa8.51□□□□□ -1.05
CHMP1A-206ENST00000549139 LORP23490 312 aaPredicted RBP8.51□□□□□ -1.05
CHMP1A-206ENST00000549139 RBM3P98179 157 aaKnown RBP8.51□□□□□ -1.05
CHMP1A-206ENST00000549139 TRBV20-1A0A075B6N2 111 aa8.5□□□□□ -1.05
CHMP1A-206ENST00000549139 C9orf118A6NHY6 69 aa8.49□□□□□ -1.05
CHMP1A-206ENST00000549139 TAX1BP3O14907 124 aa8.48□□□□□ -1.05
CHMP1A-206ENST00000549139 CCKP06307 115 aa8.48□□□□□ -1.05
CHMP1A-206ENST00000549139 DSCR8Q96T75 97 aa8.48□□□□□ -1.05
CHMP1A-206ENST00000549139 Q96NJ1 140 aa8.47□□□□□ -1.05
CHMP1A-206ENST00000549139 KRTAP10-6P60371 365 aaPredicted RBP8.46□□□□□ -1.06
CHMP1A-206ENST00000549139 JMJD7-PLA2G4BH0Y9G9 81 aa8.45□□□□□ -1.06
CHMP1A-206ENST00000549139 C9JAW5 83 aa8.44□□□□□ -1.06
CHMP1A-206ENST00000549139 A0A1W2PPM0 123 aa8.43□□□□□ -1.06
CHMP1A-206ENST00000549139 RPL37P61927 97 aaKnown RBP8.43□□□□□ -1.06
CHMP1A-206ENST00000549139 PCOTHQ58A44 107 aa8.42□□□□□ -1.06
CHMP1A-206ENST00000549139 VPS25Q9BRG1 176 aa8.41□□□□□ -1.06
CHMP1A-206ENST00000549139 KRTAP9-7A8MTY7 169 aa8.4□□□□□ -1.06
CHMP1A-206ENST00000549139 C21orf62-AS1Q17RA5 79 aa8.4□□□□□ -1.06
CHMP1A-206ENST00000549139 OBSCN-AS1Q96MR7 158 aa8.4□□□□□ -1.06
CHMP1A-206ENST00000549139 LINC00472Q9H8W2 130 aa8.4□□□□□ -1.06
CHMP1A-206ENST00000549139 LOC110117498A0A087WWA1 95 aa8.38□□□□□ -1.07
CHMP1A-206ENST00000549139 IGKV4-1P06312 121 aa8.38□□□□□ -1.07
CHMP1A-206ENST00000549139 PDE6GP18545 87 aa8.38□□□□□ -1.07
CHMP1A-206ENST00000549139 Q6ZQT0 140 aa8.38□□□□□ -1.07
CHMP1A-206ENST00000549139 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.37□□□□□ -1.07
CHMP1A-206ENST00000549139 FLGP20930 4061 aaPredicted RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms