RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, human

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LDHA-223	ENST00000545215	REG3G	Q6UW15	175 aa		4.19	□□□□□ -1.74
LDHA-223	ENST00000545215	MRPL55	Q7Z7F7	128 aa	Known RBP	4.19	□□□□□ -1.74
LDHA-223	ENST00000545215	IGLV4-69	A0A075B6H9	119 aa		4.18	□□□□□ -1.74
LDHA-223	ENST00000545215	IGHV3-64	A0A075B6Q5	118 aa		4.18	□□□□□ -1.74
LDHA-223	ENST00000545215	C11orf86	A6NJI1	115 aa		4.18	□□□□□ -1.74
LDHA-223	ENST00000545215	TCL1B	O95988	128 aa		4.18	□□□□□ -1.74
LDHA-223	ENST00000545215	ATP5E	P56381	51 aa	Predicted RBP	4.18	□□□□□ -1.74
LDHA-223	ENST00000545215	LCE1A	Q5T7P2	110 aa		4.18	□□□□□ -1.74
LDHA-223	ENST00000545215	SERP2	Q8N6R1	65 aa		4.18	□□□□□ -1.74
LDHA-223	ENST00000545215	MRPL35	Q9NZE8	188 aa	Known RBP	4.18	□□□□□ -1.74
LDHA-223	ENST00000545215	CDKN2A-AS1	Q9UH64	79 aa		4.18	□□□□□ -1.74
LDHA-223	ENST00000545215	NEB	P20929	6669 aa		4.17	□□□□□ -1.74
LDHA-223	ENST00000545215	GVQW2	A0A096LPI5	108 aa	Predicted RBP	4.17	□□□□□ -1.74
LDHA-223	ENST00000545215	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	4.17	□□□□□ -1.74
LDHA-223	ENST00000545215	TRBV10-2	A0A0K0K1G8	114 aa		4.17	□□□□□ -1.74
LDHA-223	ENST00000545215	hADV29S1	A0JD25	119 aa		4.17	□□□□□ -1.74
LDHA-223	ENST00000545215	HERVK_113	P61574	105 aa		4.17	□□□□□ -1.74
LDHA-223	ENST00000545215	PRR4	Q16378	134 aa		4.17	□□□□□ -1.74
LDHA-223	ENST00000545215	ZC2HC1B	Q5TFG8	222 aa		4.17	□□□□□ -1.74
LDHA-223	ENST00000545215	C5orf38	Q86SI9	138 aa		4.17	□□□□□ -1.74
LDHA-223	ENST00000545215		Q8IZM0	81 aa		4.17	□□□□□ -1.74
LDHA-223	ENST00000545215	ZNF22	P17026	224 aa	Predicted RBP	4.16	□□□□□ -1.74
LDHA-223	ENST00000545215	CNBP	P62633	177 aa	Known RBP	4.16	□□□□□ -1.74
LDHA-223	ENST00000545215	HIST1H4A	P62805	103 aa	Known RBP	4.16	□□□□□ -1.74
LDHA-223	ENST00000545215	COX6A2	Q02221	97 aa		4.16	□□□□□ -1.74
LDHA-223	ENST00000545215	RPL18A	Q02543	176 aa	Known RBP	4.16	□□□□□ -1.74
LDHA-223	ENST00000545215	BRK1	Q8WUW1	75 aa		4.16	□□□□□ -1.74
LDHA-223	ENST00000545215	DSCR8	Q96T75	97 aa		4.16	□□□□□ -1.74
LDHA-223	ENST00000545215	TMEM223	A0PJW6	202 aa		4.15	□□□□□ -1.75
LDHA-223	ENST00000545215	NDUFA1	O15239	70 aa		4.15	□□□□□ -1.75
LDHA-223	ENST00000545215	SPAG11B	Q08648	103 aa		4.15	□□□□□ -1.75
LDHA-223	ENST00000545215	PRR15	Q8IV56	129 aa		4.15	□□□□□ -1.75
LDHA-223	ENST00000545215		Q8N377	158 aa		4.15	□□□□□ -1.75
LDHA-223	ENST00000545215	C15orf56	Q8N910	161 aa		4.15	□□□□□ -1.75
LDHA-223	ENST00000545215	COX7B2	Q8TF08	81 aa		4.14	□□□□□ -1.75
LDHA-223	ENST00000545215	TRBV30	A0A0K0K1B3	111 aa		4.13	□□□□□ -1.75
LDHA-223	ENST00000545215	LEPROT	O15243	131 aa		4.13	□□□□□ -1.75
LDHA-223	ENST00000545215	SYCN	Q0VAF6	134 aa		4.13	□□□□□ -1.75
LDHA-223	ENST00000545215	HIGD2B	Q4VC39	106 aa		4.13	□□□□□ -1.75
LDHA-223	ENST00000545215	C2orf82	Q6UX34	121 aa		4.13	□□□□□ -1.75
LDHA-223	ENST00000545215	CAMK2N2	Q96S95	79 aa		4.13	□□□□□ -1.75
LDHA-223	ENST00000545215	PRO1854	Q9UHT4	67 aa		4.13	□□□□□ -1.75
LDHA-223	ENST00000545215	IGKV2D-26	A0A0A0MRZ7	120 aa		4.12	□□□□□ -1.75
LDHA-223	ENST00000545215		A0A0B4J2C4	111 aa		4.12	□□□□□ -1.75
LDHA-223	ENST00000545215	TRBV7-6	A0A0J9YX20	115 aa		4.12	□□□□□ -1.75
LDHA-223	ENST00000545215	NDUFAF8	A1L188	74 aa		4.12	□□□□□ -1.75
LDHA-223	ENST00000545215	COX6C	P09669	75 aa		4.12	□□□□□ -1.75
LDHA-223	ENST00000545215	LGALS3	P17931	250 aa	Known RBP	4.12	□□□□□ -1.75
LDHA-223	ENST00000545215	KIAA0087	Q14695	138 aa		4.12	□□□□□ -1.75
LDHA-223	ENST00000545215	C9orf163	Q8N9P6	203 aa		4.12	□□□□□ -1.75
LDHA-223	ENST00000545215	TOMM7	Q9P0U1	55 aa		4.12	□□□□□ -1.75
LDHA-223	ENST00000545215	KRTAP10-6	P60371	365 aa	Predicted RBP	4.11	□□□□□ -1.75
LDHA-223	ENST00000545215	COX17	Q14061	63 aa		4.11	□□□□□ -1.75
LDHA-223	ENST00000545215	SCGB1D4	Q6XE38	83 aa		4.11	□□□□□ -1.75
LDHA-223	ENST00000545215	LINC00474	Q9P2X8	69 aa		4.11	□□□□□ -1.75
LDHA-223	ENST00000545215	TEX49	A0A1B0GTD5	131 aa		4.1	□□□□□ -1.75
LDHA-223	ENST00000545215	BCE1	O60756	84 aa		4.1	□□□□□ -1.75
LDHA-223	ENST00000545215	TLX1NB	P0CAT3	122 aa		4.1	□□□□□ -1.75
LDHA-223	ENST00000545215	SDIM1	Q6ZPB5	146 aa		4.1	□□□□□ -1.75
LDHA-223	ENST00000545215	ZNF625	Q96I27	306 aa	Predicted RBP	4.1	□□□□□ -1.75
LDHA-223	ENST00000545215	NDUFA12	Q9UI09	145 aa		4.1	□□□□□ -1.75
LDHA-223	ENST00000545215	MUC17	Q685J3	4493 aa		4.1	□□□□□ -1.75
LDHA-223	ENST00000545215	NDUFC1	O43677	76 aa		4.09	□□□□□ -1.75
LDHA-223	ENST00000545215	CIRBP	Q14011	172 aa	Known RBP	4.09	□□□□□ -1.75
LDHA-223	ENST00000545215	UNQ6190/PRO20217	Q6UXQ8	127 aa		4.09	□□□□□ -1.75
LDHA-223	ENST00000545215	DAND5	Q8N907	189 aa		4.09	□□□□□ -1.75
LDHA-223	ENST00000545215	DHRS4-AS1	Q9P1J3	65 aa		4.09	□□□□□ -1.75
LDHA-223	ENST00000545215	ZNF815P	A8K554	130 aa		4.08	□□□□□ -1.76
LDHA-223	ENST00000545215	C6orf48	Q9UBA6	75 aa		4.08	□□□□□ -1.76
LDHA-223	ENST00000545215	TIMM17B	O60830	172 aa		4.07	□□□□□ -1.76
LDHA-223	ENST00000545215		Q1RN00	199 aa		4.07	□□□□□ -1.76
LDHA-223	ENST00000545215	ATP5EP2	Q5VTU8	51 aa		4.07	□□□□□ -1.76
LDHA-223	ENST00000545215		Q6JHZ5	121 aa		4.07	□□□□□ -1.76
LDHA-223	ENST00000545215		A0A0J9YXY3	114 aa		4.06	□□□□□ -1.76
LDHA-223	ENST00000545215	TSPEAR-AS2	P59090	65 aa		4.06	□□□□□ -1.76
LDHA-223	ENST00000545215	MT1H	P80294	61 aa		4.06	□□□□□ -1.76
LDHA-223	ENST00000545215	S100A7L2	Q5SY68	101 aa		4.06	□□□□□ -1.76
LDHA-223	ENST00000545215	TTTY13	Q9BZ97	58 aa		4.06	□□□□□ -1.76
LDHA-223	ENST00000545215	LINC00158	P58513	81 aa		4.05	□□□□□ -1.76
LDHA-223	ENST00000545215	SPINK6	Q6UWN8	80 aa		4.05	□□□□□ -1.76
LDHA-223	ENST00000545215	NDUFS5	O43920	106 aa		4.04	□□□□□ -1.76
LDHA-223	ENST00000545215	CHTF8	P0CG12	524 aa		4.04	□□□□□ -1.76
LDHA-223	ENST00000545215	SPACA4	Q8TDM5	124 aa		4.04	□□□□□ -1.76
LDHA-223	ENST00000545215		A0A096LNI7	61 aa		4.03	□□□□□ -1.76
LDHA-223	ENST00000545215	KRTAP16-1	A8MUX0	517 aa		4.03	□□□□□ -1.76
LDHA-223	ENST00000545215	LST1	O00453	97 aa		4.03	□□□□□ -1.76
LDHA-223	ENST00000545215	C9orf116	Q5BN46	136 aa	Predicted RBP	4.03	□□□□□ -1.76
LDHA-223	ENST00000545215	FP248	Q71RG6	208 aa	Predicted RBP	4.03	□□□□□ -1.76
LDHA-223	ENST00000545215	KTN1-AS1	Q86SY8	53 aa		4.03	□□□□□ -1.76
LDHA-223	ENST00000545215	MIR7-3HG	Q8N6C7	128 aa		4.03	□□□□□ -1.76
LDHA-223	ENST00000545215	C7orf33	Q8WU49	177 aa		4.03	□□□□□ -1.76
LDHA-223	ENST00000545215	IGKV2-24	A0A0C4DH68	120 aa		4.02	□□□□□ -1.77
LDHA-223	ENST00000545215	RBM3	P98179	157 aa	Known RBP	4.02	□□□□□ -1.77
LDHA-223	ENST00000545215	KRTAP7-1	Q8IUC3	87 aa		4.02	□□□□□ -1.77
LDHA-223	ENST00000545215	CYSTM1	Q9H1C7	97 aa		4.02	□□□□□ -1.77
LDHA-223	ENST00000545215	SND1-IT1	Q9HBX3	110 aa		4.02	□□□□□ -1.77
LDHA-223	ENST00000545215	PLAC8	Q9NZF1	115 aa		4.02	□□□□□ -1.77
LDHA-223	ENST00000545215	PSORS1C2	Q9UIG4	136 aa		4.02	□□□□□ -1.77
LDHA-223	ENST00000545215	DNAL4	O96015	105 aa		4.01	□□□□□ -1.77
LDHA-223	ENST00000545215	CCK	P06307	115 aa		4.01	□□□□□ -1.77

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