RNA–Protein interactions for RNA: ENST00000543658.5

DDB1-223, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-223ENST00000543658 SPRR1BP22528 89 aa7.12□□□□□ -1.27
DDB1-223ENST00000543658 LINC00483Q53H64 154 aa7.12□□□□□ -1.27
DDB1-223ENST00000543658 IGLV9-49A0A0B4J1Y8 123 aa7.11□□□□□ -1.27
DDB1-223ENST00000543658 C9JAW5 83 aa7.11□□□□□ -1.27
DDB1-223ENST00000543658 TMEM256-PLSCR3K7ERE1 68 aa7.11□□□□□ -1.27
DDB1-223ENST00000543658 C9orf153Q5TBE3 101 aa7.11□□□□□ -1.27
DDB1-223ENST00000543658 KRTAP4-5Q9BYR2 181 aa7.11□□□□□ -1.27
DDB1-223ENST00000543658 ANAPC11Q9NYG5 84 aa7.11□□□□□ -1.27
DDB1-223ENST00000543658 PKHD1L1Q86WI1 4243 aa7.11□□□□□ -1.27
DDB1-223ENST00000543658 H3BMG7 143 aa7.1□□□□□ -1.27
DDB1-223ENST00000543658 K7EP34 96 aa7.1□□□□□ -1.27
DDB1-223ENST00000543658 KRTAP1-4P0C5Y4 121 aa7.1□□□□□ -1.27
DDB1-223ENST00000543658 LINC01547P58512 204 aaPredicted RBP7.1□□□□□ -1.27
DDB1-223ENST00000543658 Q8N377 158 aa7.1□□□□□ -1.27
DDB1-223ENST00000543658 SRRM2Q9UQ35 2752 aaKnown RBP7.09□□□□□ -1.27
DDB1-223ENST00000543658 BAALC-AS2P0C853 105 aa7.08□□□□□ -1.28
DDB1-223ENST00000543658 C3orf22Q8N5N4 141 aa7.08□□□□□ -1.28
DDB1-223ENST00000543658 A0A087X002 238 aa7.07□□□□□ -1.28
DDB1-223ENST00000543658 MOBPQ13875 183 aa7.07□□□□□ -1.28
DDB1-223ENST00000543658 PRR26Q8N8Z3 221 aa7.07□□□□□ -1.28
DDB1-223ENST00000543658 Q8NBF4 154 aa7.07□□□□□ -1.28
DDB1-223ENST00000543658 TYMSOSQ8TAI1 123 aa7.07□□□□□ -1.28
DDB1-223ENST00000543658 LINC01600Q96MT4 127 aa7.07□□□□□ -1.28
DDB1-223ENST00000543658 H3BT86 120 aa7.06□□□□□ -1.28
DDB1-223ENST00000543658 OXTP01178 125 aa7.06□□□□□ -1.28
DDB1-223ENST00000543658 NDUFV3P56181 108 aaKnown RBP7.06□□□□□ -1.28
DDB1-223ENST00000543658 UBE2V1Q13404 147 aa7.06□□□□□ -1.28
DDB1-223ENST00000543658 MTURNQ8N3F0 131 aa7.05□□□□□ -1.28
DDB1-223ENST00000543658 SMIM29Q86T20 159 aa7.04□□□□□ -1.28
DDB1-223ENST00000543658 ANKRD29Q8N6D5 301 aa7.04□□□□□ -1.28
DDB1-223ENST00000543658 FLG2Q5D862 2391 aaPredicted RBP7.03□□□□□ -1.28
DDB1-223ENST00000543658 A0A1B0GV72 72 aa7.03□□□□□ -1.28
DDB1-223ENST00000543658 SSBP3-AS1Q7Z2R9 100 aa7.03□□□□□ -1.28
DDB1-223ENST00000543658 KRTAP13-2Q52LG2 175 aa7.02□□□□□ -1.29
DDB1-223ENST00000543658 LCE2AQ5TA79 106 aaPredicted RBP7.02□□□□□ -1.29
DDB1-223ENST00000543658 KRTAP29-1A8MX34 341 aaPredicted RBP7.01□□□□□ -1.29
DDB1-223ENST00000543658 JMJD7-PLA2G4BH0Y9G9 81 aa7.01□□□□□ -1.29
DDB1-223ENST00000543658 Q6JHZ5 121 aa7.01□□□□□ -1.29
DDB1-223ENST00000543658 RBM3P98179 157 aaKnown RBP7□□□□□ -1.29
DDB1-223ENST00000543658 F8W1H4 67 aa6.99□□□□□ -1.29
DDB1-223ENST00000543658 LINC00304Q8N9R0 145 aa6.99□□□□□ -1.29
DDB1-223ENST00000543658 DSCR8Q96T75 97 aa6.99□□□□□ -1.29
DDB1-223ENST00000543658 IGLV8-61A0A075B6I0 122 aa6.98□□□□□ -1.29
DDB1-223ENST00000543658 KRTAP10-8P60410 259 aa6.96□□□□□ -1.3
DDB1-223ENST00000543658 SPAG11AQ6PDA7 123 aa6.96□□□□□ -1.3
DDB1-223ENST00000543658 IGFL1Q6UW32 110 aa6.96□□□□□ -1.3
DDB1-223ENST00000543658 PRO0461Q9UI25 63 aa6.96□□□□□ -1.3
DDB1-223ENST00000543658 HRCT1Q6UXD1 115 aa6.95□□□□□ -1.3
DDB1-223ENST00000543658 ABCA13Q86UQ4 5058 aa6.95□□□□□ -1.3
DDB1-223ENST00000543658 C21orf62-AS1Q17RA5 79 aa6.94□□□□□ -1.3
DDB1-223ENST00000543658 VPS25Q9BRG1 176 aa6.94□□□□□ -1.3
DDB1-223ENST00000543658 FAT3Q8TDW7 4589 aa6.93□□□□□ -1.3
DDB1-223ENST00000543658 MT1HL1P0DM35 61 aa6.93□□□□□ -1.3
DDB1-223ENST00000543658 PDE6GP18545 87 aa6.93□□□□□ -1.3
DDB1-223ENST00000543658 LORP23490 312 aaPredicted RBP6.93□□□□□ -1.3
DDB1-223ENST00000543658 CD164Q04900 197 aa6.93□□□□□ -1.3
DDB1-223ENST00000543658 C14orf132Q9NPU4 83 aa6.93□□□□□ -1.3
DDB1-223ENST00000543658 A0A0G2JQZ4 141 aa6.92□□□□□ -1.3
DDB1-223ENST00000543658 TRBV7-4A0A0J9YYF1 115 aa6.92□□□□□ -1.3
DDB1-223ENST00000543658 SPINK1P00995 79 aa6.92□□□□□ -1.3
DDB1-223ENST00000543658 CCKP06307 115 aa6.92□□□□□ -1.3
DDB1-223ENST00000543658 TEN1Q86WV5 123 aa6.92□□□□□ -1.3
DDB1-223ENST00000543658 LIMD2Q9BT23 127 aa6.92□□□□□ -1.3
DDB1-223ENST00000543658 K7ERU9 68 aa6.91□□□□□ -1.3
DDB1-223ENST00000543658 OBSCN-AS1Q96MR7 158 aa6.91□□□□□ -1.3
DDB1-223ENST00000543658 LRP1Q07954 4544 aaKnown RBP6.9□□□□□ -1.3
DDB1-223ENST00000543658 LOC110117498A0A087WWA1 95 aa6.9□□□□□ -1.3
DDB1-223ENST00000543658 ETDBQ3ZM63 59 aa6.9□□□□□ -1.3
DDB1-223ENST00000543658 Q6Q795 121 aa6.89□□□□□ -1.31
DDB1-223ENST00000543658 MYCBP2O75592 4640 aa6.89□□□□□ -1.31
DDB1-223ENST00000543658 TRBV7-7A0A0K0K1E9 115 aa6.88□□□□□ -1.31
DDB1-223ENST00000543658 RPS29P62273 56 aaKnown RBP6.88□□□□□ -1.31
DDB1-223ENST00000543658 Q6ZQT0 140 aa6.88□□□□□ -1.31
DDB1-223ENST00000543658 SS18L2Q9UHA2 77 aa6.88□□□□□ -1.31
DDB1-223ENST00000543658 A0A1W2PNM2 257 aa6.86□□□□□ -1.31
DDB1-223ENST00000543658 A0A087WSZ3 146 aa6.85□□□□□ -1.31
DDB1-223ENST00000543658 J3QR89 54 aa6.84□□□□□ -1.31
DDB1-223ENST00000543658 TNXBP22105 4242 aa6.84□□□□□ -1.31
DDB1-223ENST00000543658 A0A1B0GW54 56 aa6.83□□□□□ -1.32
DDB1-223ENST00000543658 DMBT1Q9UGM3 2413 aaPredicted RBP6.81□□□□□ -1.32
DDB1-223ENST00000543658 Q5XG85 94 aa6.81□□□□□ -1.32
DDB1-223ENST00000543658 ASB16-AS1Q495Z4 193 aa6.78□□□□□ -1.32
DDB1-223ENST00000543658 RETNLBQ9BQ08 111 aa6.78□□□□□ -1.32
DDB1-223ENST00000543658 NREPQ16612 68 aa6.77□□□□□ -1.33
DDB1-223ENST00000543658 PRR4Q16378 134 aa6.76□□□□□ -1.33
DDB1-223ENST00000543658 UBL5Q9BZL1 73 aa6.76□□□□□ -1.33
DDB1-223ENST00000543658 HERC1Q15751 4861 aa6.75□□□□□ -1.33
DDB1-223ENST00000543658 ACYP1P07311 99 aa6.74□□□□□ -1.33
DDB1-223ENST00000543658 C1orf195Q5TG92 126 aa6.74□□□□□ -1.33
DDB1-223ENST00000543658 FP248Q71RG6 208 aaPredicted RBP6.74□□□□□ -1.33
DDB1-223ENST00000543658 SIGMAR1Q99720 223 aa6.74□□□□□ -1.33
DDB1-223ENST00000543658 IGKV4-1P06312 121 aa6.72□□□□□ -1.33
DDB1-223ENST00000543658 FAM240AA0A1B0GVK7 77 aa6.71□□□□□ -1.34
DDB1-223ENST00000543658 J3KT08 172 aa6.71□□□□□ -1.34
DDB1-223ENST00000543658 LINC00846Q9NV44 126 aa6.71□□□□□ -1.34
DDB1-223ENST00000543658 IGLV7-46A0A075B6I9 117 aa6.7□□□□□ -1.34
DDB1-223ENST00000543658 PCP4P48539 62 aa6.7□□□□□ -1.34
DDB1-223ENST00000543658 DEFB116Q30KQ4 102 aa6.7□□□□□ -1.34
DDB1-223ENST00000543658 Q6ZVQ6 151 aa6.7□□□□□ -1.34
DDB1-223ENST00000543658 Q96NJ1 140 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms