RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 C20orf197Q8N268 126 aa2.12□□□□□ -2.07
SNHG1-217ENST00000541578 ARHGAP5-AS1Q96IT6 56 aa2.12□□□□□ -2.07
SNHG1-217ENST00000541578 NABP2Q9BQ15 211 aa2.12□□□□□ -2.07
SNHG1-217ENST00000541578 UBE2D4Q9Y2X8 147 aa2.12□□□□□ -2.07
SNHG1-217ENST00000541578 IGKV2D-26A0A0A0MRZ7 120 aa2.11□□□□□ -2.07
SNHG1-217ENST00000541578 LINC01546A6NGU7 62 aa2.11□□□□□ -2.07
SNHG1-217ENST00000541578 F8WEM9 126 aa2.11□□□□□ -2.07
SNHG1-217ENST00000541578 IGHV3-33P01772 117 aa2.11□□□□□ -2.07
SNHG1-217ENST00000541578 GDF5OSQ5U4N7 250 aa2.11□□□□□ -2.07
SNHG1-217ENST00000541578 PATE2Q6UY27 113 aa2.11□□□□□ -2.07
SNHG1-217ENST00000541578 LINC00269Q8N2A0 174 aa2.11□□□□□ -2.07
SNHG1-217ENST00000541578 CLEC2BQ92478 149 aa2.11□□□□□ -2.07
SNHG1-217ENST00000541578 CYP4F30PQ9H0H9 118 aa2.11□□□□□ -2.07
SNHG1-217ENST00000541578 ALMS1Q8TCU4 4167 aa2.11□□□□□ -2.07
SNHG1-217ENST00000541578 H3BUA1 57 aa2.1□□□□□ -2.07
SNHG1-217ENST00000541578 SPINK4O60575 86 aa2.1□□□□□ -2.07
SNHG1-217ENST00000541578 DEFA4P12838 97 aa2.1□□□□□ -2.07
SNHG1-217ENST00000541578 MIFP14174 115 aa2.1□□□□□ -2.07
SNHG1-217ENST00000541578 TMEM141Q96I45 108 aa2.1□□□□□ -2.07
SNHG1-217ENST00000541578 USMG5Q96IX5 58 aa2.1□□□□□ -2.07
SNHG1-217ENST00000541578 FAM167A-AS1Q96KT0 104 aa2.1□□□□□ -2.07
SNHG1-217ENST00000541578 TMEM167BQ9NRX6 74 aa2.1□□□□□ -2.07
SNHG1-217ENST00000541578 TRAV12-1A0A0B4J245 112 aa2.09□□□□□ -2.07
SNHG1-217ENST00000541578 HIGD1CA8MV81 97 aa2.09□□□□□ -2.07
SNHG1-217ENST00000541578 E7EUB6 86 aa2.09□□□□□ -2.07
SNHG1-217ENST00000541578 IGKV1-16P04430 117 aa2.09□□□□□ -2.07
SNHG1-217ENST00000541578 C1orf134Q5TEV5 83 aa2.09□□□□□ -2.07
SNHG1-217ENST00000541578 SOSTDC1Q6X4U4 206 aa2.09□□□□□ -2.07
SNHG1-217ENST00000541578 Q6ZTI0 123 aa2.09□□□□□ -2.07
SNHG1-217ENST00000541578 Q8N6K4 173 aa2.09□□□□□ -2.07
SNHG1-217ENST00000541578 PSENENQ9NZ42 101 aa2.09□□□□□ -2.07
SNHG1-217ENST00000541578 DMBT1Q9UGM3 2413 aaPredicted RBP2.09□□□□□ -2.08
SNHG1-217ENST00000541578 DNAH10Q8IVF4 4471 aa2.09□□□□□ -2.08
SNHG1-217ENST00000541578 TRAV10A0A0B4J240 114 aa2.08□□□□□ -2.08
SNHG1-217ENST00000541578 hDV103S1A0JD37 113 aa2.08□□□□□ -2.08
SNHG1-217ENST00000541578 H3BRN7 92 aa2.08□□□□□ -2.08
SNHG1-217ENST00000541578 IGHV3-30P01768 117 aa2.08□□□□□ -2.08
SNHG1-217ENST00000541578 TFF1P04155 84 aa2.08□□□□□ -2.08
SNHG1-217ENST00000541578 IGHV3-30-5P0DP03 117 aa2.08□□□□□ -2.08
SNHG1-217ENST00000541578 FXYD4P59646 89 aa2.08□□□□□ -2.08
SNHG1-217ENST00000541578 FXYD3Q14802 87 aa2.08□□□□□ -2.08
SNHG1-217ENST00000541578 PIGYQ3MUY2 71 aa2.08□□□□□ -2.08
SNHG1-217ENST00000541578 TMEM263Q8WUH6 116 aaKnown RBP2.08□□□□□ -2.08
SNHG1-217ENST00000541578 LIMD2Q9BT23 127 aa2.08□□□□□ -2.08
SNHG1-217ENST00000541578 NDUFA12Q9UI09 145 aa2.08□□□□□ -2.08
SNHG1-217ENST00000541578 APLNQ9ULZ1 77 aa2.08□□□□□ -2.08
SNHG1-217ENST00000541578 TRAV22A0A0B4J277 110 aa2.07□□□□□ -2.08
SNHG1-217ENST00000541578 ZNF815PA8K554 130 aa2.07□□□□□ -2.08
SNHG1-217ENST00000541578 HCG22E2RYF7 251 aa2.07□□□□□ -2.08
SNHG1-217ENST00000541578 F8VRH5 84 aa2.07□□□□□ -2.08
SNHG1-217ENST00000541578 G3V318 75 aa2.07□□□□□ -2.08
SNHG1-217ENST00000541578 K7EMI3 77 aa2.07□□□□□ -2.08
SNHG1-217ENST00000541578 DNAL4O96015 105 aa2.07□□□□□ -2.08
SNHG1-217ENST00000541578 ARL14EPLP0DKL9 152 aa2.07□□□□□ -2.08
SNHG1-217ENST00000541578 DEFB114Q30KQ6 69 aa2.07□□□□□ -2.08
SNHG1-217ENST00000541578 SFTA2Q6UW10 78 aa2.07□□□□□ -2.08
SNHG1-217ENST00000541578 UBE2DNLQ8IWF7 75 aa2.07□□□□□ -2.08
SNHG1-217ENST00000541578 CDC42SE1Q9NRR8 79 aa2.07□□□□□ -2.08
SNHG1-217ENST00000541578 TIMM8BQ9Y5J9 83 aaPredicted RBP2.07□□□□□ -2.08
SNHG1-217ENST00000541578 KIAA1109Q2LD37 5005 aa2.07□□□□□ -2.08
SNHG1-217ENST00000541578 PKHD1P08F94 4074 aa2.06□□□□□ -2.08
SNHG1-217ENST00000541578 A0A0J9YY99 117 aa2.06□□□□□ -2.08
SNHG1-217ENST00000541578 A0A1B0GUT8 65 aa2.06□□□□□ -2.08
SNHG1-217ENST00000541578 NDUFA3O95167 84 aa2.06□□□□□ -2.08
SNHG1-217ENST00000541578 ZNF137PP52743 207 aa2.06□□□□□ -2.08
SNHG1-217ENST00000541578 HERC1Q15751 4861 aa2.06□□□□□ -2.08
SNHG1-217ENST00000541578 DYNC1H1Q14204 4646 aaKnown RBP2.05□□□□□ -2.08
SNHG1-217ENST00000541578 DNAH6Q9C0G6 4158 aa2.05□□□□□ -2.08
SNHG1-217ENST00000541578 ABCA13Q86UQ4 5058 aa2.05□□□□□ -2.08
SNHG1-217ENST00000541578 IGKV3D-7A0A0C4DH55 119 aa2.05□□□□□ -2.08
SNHG1-217ENST00000541578 A0A0G2JQZ4 141 aa2.05□□□□□ -2.08
SNHG1-217ENST00000541578 M0R2N4 97 aa2.05□□□□□ -2.08
SNHG1-217ENST00000541578 PPP1R17O96001 155 aa2.05□□□□□ -2.08
SNHG1-217ENST00000541578 DEFB135Q30KP9 77 aa2.05□□□□□ -2.08
SNHG1-217ENST00000541578 C9orf116Q5BN46 136 aaPredicted RBP2.05□□□□□ -2.08
SNHG1-217ENST00000541578 Q5VV11 94 aa2.05□□□□□ -2.08
SNHG1-217ENST00000541578 SPTSSBQ8NFR3 76 aa2.05□□□□□ -2.08
SNHG1-217ENST00000541578 TMEM14BQ9NUH8 114 aa2.05□□□□□ -2.08
SNHG1-217ENST00000541578 PRO2289Q9P1D8 64 aa2.05□□□□□ -2.08
SNHG1-217ENST00000541578 PKD1P98161 4303 aa2.05□□□□□ -2.08
SNHG1-217ENST00000541578 DNAH17Q9UFH2 4485 aa2.04□□□□□ -2.08
SNHG1-217ENST00000541578 A0A087WVE0 104 aa2.04□□□□□ -2.08
SNHG1-217ENST00000541578 DEFB131BA0A096LNP1 70 aa2.04□□□□□ -2.08
SNHG1-217ENST00000541578 TRBV6-8A0A0A6YYG3 113 aa2.04□□□□□ -2.08
SNHG1-217ENST00000541578 TRBV7-4A0A0J9YYF1 115 aa2.04□□□□□ -2.08
SNHG1-217ENST00000541578 CHKB-CPT1BH3BT56 60 aa2.04□□□□□ -2.08
SNHG1-217ENST00000541578 SPANXN5Q5MJ07 72 aa2.04□□□□□ -2.08
SNHG1-217ENST00000541578 CASC2Q6XLA1 102 aa2.04□□□□□ -2.08
SNHG1-217ENST00000541578 Q8NDZ9 215 aa2.04□□□□□ -2.08
SNHG1-217ENST00000541578 TMEM254Q8TBM7 123 aa2.04□□□□□ -2.08
SNHG1-217ENST00000541578 OBSCN-AS1Q96MR7 158 aa2.04□□□□□ -2.08
SNHG1-217ENST00000541578 RETNLBQ9BQ08 111 aa2.04□□□□□ -2.08
SNHG1-217ENST00000541578 LINC00467Q9BRT7 94 aa2.04□□□□□ -2.08
SNHG1-217ENST00000541578 TRAV23DV6A0A075B6W5 121 aa2.03□□□□□ -2.08
SNHG1-217ENST00000541578 TRBV6-1A0A0K0K1D8 114 aa2.03□□□□□ -2.08
SNHG1-217ENST00000541578 D6R8Y8 96 aa2.03□□□□□ -2.08
SNHG1-217ENST00000541578 ARMS2P0C7Q2 107 aa2.03□□□□□ -2.08
SNHG1-217ENST00000541578 BAALC-AS2P0C853 105 aa2.03□□□□□ -2.08
SNHG1-217ENST00000541578 IAPPP10997 89 aa2.03□□□□□ -2.08
SNHG1-217ENST00000541578 MUSTN1Q8IVN3 82 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms