RNA–Protein interactions for RNA: ENST00000541286.5

SFSWAP-210, Transcript of splicing factor SWAP, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-210ENST00000541286 RYR3Q15413 4870 aa9.24□□□□□ -0.93
SFSWAP-210ENST00000541286 NUPR2A6NF83 97 aa9.22□□□□□ -0.93
SFSWAP-210ENST00000541286 ST20-AS1Q8NBB2 130 aa9.22□□□□□ -0.93
SFSWAP-210ENST00000541286 ETDCA0A1B0GVM5 59 aa9.22□□□□□ -0.93
SFSWAP-210ENST00000541286 ATP5EP56381 51 aaPredicted RBP9.22□□□□□ -0.93
SFSWAP-210ENST00000541286 PMAIP1Q13794 54 aa9.22□□□□□ -0.93
SFSWAP-210ENST00000541286 H3BNG1 76 aa9.2□□□□□ -0.94
SFSWAP-210ENST00000541286 H3BQ85 93 aa9.2□□□□□ -0.94
SFSWAP-210ENST00000541286 UBE2BP63146 152 aa9.2□□□□□ -0.94
SFSWAP-210ENST00000541286 A8MUN3 132 aa9.2□□□□□ -0.94
SFSWAP-210ENST00000541286 LINC01556Q5JQF7 62 aa9.19□□□□□ -0.94
SFSWAP-210ENST00000541286 hDV103S1A0JD37 113 aa9.19□□□□□ -0.94
SFSWAP-210ENST00000541286 Q8N377 158 aa9.19□□□□□ -0.94
SFSWAP-210ENST00000541286 IGKV2-24A0A0C4DH68 120 aa9.18□□□□□ -0.94
SFSWAP-210ENST00000541286 DNAH6Q9C0G6 4158 aa9.17□□□□□ -0.94
SFSWAP-210ENST00000541286 TRAV22A0A0B4J277 110 aa9.17□□□□□ -0.94
SFSWAP-210ENST00000541286 K7EQZ3 153 aa9.16□□□□□ -0.94
SFSWAP-210ENST00000541286 SPTSSBQ8NFR3 76 aa9.16□□□□□ -0.94
SFSWAP-210ENST00000541286 WFDC13Q8IUB5 93 aa9.15□□□□□ -0.94
SFSWAP-210ENST00000541286 PKHD1P08F94 4074 aa9.15□□□□□ -0.94
SFSWAP-210ENST00000541286 RYR2Q92736 4967 aa9.14□□□□□ -0.95
SFSWAP-210ENST00000541286 DNAH10OSP0CZ25 163 aa9.14□□□□□ -0.95
SFSWAP-210ENST00000541286 KCNQ1DNQ9H478 68 aa9.14□□□□□ -0.95
SFSWAP-210ENST00000541286 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.13□□□□□ -0.95
SFSWAP-210ENST00000541286 ERC2-IT1O76042 136 aa9.13□□□□□ -0.95
SFSWAP-210ENST00000541286 C1orf137Q5JT78 98 aa9.13□□□□□ -0.95
SFSWAP-210ENST00000541286 Q9BRP9 147 aa9.13□□□□□ -0.95
SFSWAP-210ENST00000541286 A0A1W2PNM2 257 aa9.12□□□□□ -0.95
SFSWAP-210ENST00000541286 Q6ZRX8 168 aa9.11□□□□□ -0.95
SFSWAP-210ENST00000541286 LINC00476Q8WZB0 136 aa9.11□□□□□ -0.95
SFSWAP-210ENST00000541286 DHRS4-AS1Q9P1J3 65 aa9.09□□□□□ -0.95
SFSWAP-210ENST00000541286 FAT2Q9NYQ8 4349 aa9.09□□□□□ -0.95
SFSWAP-210ENST00000541286 NBDYA0A0U1RRE5 68 aa9.09□□□□□ -0.96
SFSWAP-210ENST00000541286 PRLHP81277 87 aa9.09□□□□□ -0.96
SFSWAP-210ENST00000541286 MRPL55Q7Z7F7 128 aaKnown RBP9.09□□□□□ -0.96
SFSWAP-210ENST00000541286 RPL37AP61513 92 aaKnown RBP9.08□□□□□ -0.96
SFSWAP-210ENST00000541286 PRR15Q8IV56 129 aa9.08□□□□□ -0.96
SFSWAP-210ENST00000541286 IGLV1-50A0A075B6I6 118 aa9.08□□□□□ -0.96
SFSWAP-210ENST00000541286 HECTD4Q9Y4D8 3996 aa9.07□□□□□ -0.96
SFSWAP-210ENST00000541286 CHKB-CPT1BH3BT56 60 aa9.07□□□□□ -0.96
SFSWAP-210ENST00000541286 PSCAO43653 123 aa9.07□□□□□ -0.96
SFSWAP-210ENST00000541286 DSCR10P59022 87 aa9.07□□□□□ -0.96
SFSWAP-210ENST00000541286 LINC00208Q96KT6 92 aa9.06□□□□□ -0.96
SFSWAP-210ENST00000541286 DNAH11Q96DT5 4516 aa9.06□□□□□ -0.96
SFSWAP-210ENST00000541286 A0A096LNI7 61 aa9.05□□□□□ -0.96
SFSWAP-210ENST00000541286 DNAH17Q9UFH2 4485 aa9.05□□□□□ -0.96
SFSWAP-210ENST00000541286 KRTAP7-1Q8IUC3 87 aa9.05□□□□□ -0.96
SFSWAP-210ENST00000541286 ALMS1Q8TCU4 4167 aa9.05□□□□□ -0.96
SFSWAP-210ENST00000541286 Q1T7F1 81 aa9.04□□□□□ -0.96
SFSWAP-210ENST00000541286 IGLV5-48A0A075B6I7 105 aa9.03□□□□□ -0.96
SFSWAP-210ENST00000541286 CD164Q04900 197 aa9.02□□□□□ -0.97
SFSWAP-210ENST00000541286 REG3GQ6UW15 175 aa9.02□□□□□ -0.97
SFSWAP-210ENST00000541286 Q8NBF4 154 aa9.01□□□□□ -0.97
SFSWAP-210ENST00000541286 PRR15LQ9BU68 103 aa9.01□□□□□ -0.97
SFSWAP-210ENST00000541286 CHTF8P0CG12 524 aa9□□□□□ -0.97
SFSWAP-210ENST00000541286 DNAH5Q8TE73 4624 aa9□□□□□ -0.97
SFSWAP-210ENST00000541286 TNP2Q05952 138 aa8.99□□□□□ -0.97
SFSWAP-210ENST00000541286 PKD1P98161 4303 aa8.99□□□□□ -0.97
SFSWAP-210ENST00000541286 A0A087WSZ3 146 aa8.99□□□□□ -0.97
SFSWAP-210ENST00000541286 KRTAP4-16G5E9R7 235 aaPredicted RBP8.99□□□□□ -0.97
SFSWAP-210ENST00000541286 C4orf48Q5BLP8 95 aa8.98□□□□□ -0.97
SFSWAP-210ENST00000541286 Q5VV11 94 aa8.98□□□□□ -0.97
SFSWAP-210ENST00000541286 Q6ZR54 194 aa8.98□□□□□ -0.97
SFSWAP-210ENST00000541286 Q6ZRN7 208 aaPredicted RBP8.98□□□□□ -0.97
SFSWAP-210ENST00000541286 HCG22E2RYF7 251 aa8.98□□□□□ -0.97
SFSWAP-210ENST00000541286 TLX1NBP0CAT3 122 aa8.98□□□□□ -0.97
SFSWAP-210ENST00000541286 ZCCHC13Q8WW36 166 aaKnown RBP8.97□□□□□ -0.97
SFSWAP-210ENST00000541286 RTL8CO15255 209 aa8.95□□□□□ -0.98
SFSWAP-210ENST00000541286 C16orf90A8MZG2 172 aa8.95□□□□□ -0.98
SFSWAP-210ENST00000541286 EPPK1P58107 5090 aaKnown RBP8.95□□□□□ -0.98
SFSWAP-210ENST00000541286 SPRR1AP35321 89 aa8.95□□□□□ -0.98
SFSWAP-210ENST00000541286 UBE2AP49459 152 aa8.94□□□□□ -0.98
SFSWAP-210ENST00000541286 A6NED7 52 aa8.93□□□□□ -0.98
SFSWAP-210ENST00000541286 C1orf134Q5TEV5 83 aa8.93□□□□□ -0.98
SFSWAP-210ENST00000541286 IGFL1Q6UW32 110 aa8.93□□□□□ -0.98
SFSWAP-210ENST00000541286 PHF5AQ7RTV0 110 aaKnown RBP8.93□□□□□ -0.98
SFSWAP-210ENST00000541286 PLA2G2DQ9UNK4 145 aa8.93□□□□□ -0.98
SFSWAP-210ENST00000541286 MP68P56378 58 aa8.93□□□□□ -0.98
SFSWAP-210ENST00000541286 LCE6AA0A183 80 aa8.92□□□□□ -0.98
SFSWAP-210ENST00000541286 KRTAP10-2P60368 255 aa8.92□□□□□ -0.98
SFSWAP-210ENST00000541286 PCOTHQ58A44 107 aa8.91□□□□□ -0.98
SFSWAP-210ENST00000541286 IGLV5-37A0A075B6J1 123 aa8.9□□□□□ -0.98
SFSWAP-210ENST00000541286 LCA10Q71F78 164 aa8.89□□□□□ -0.99
SFSWAP-210ENST00000541286 Q8N9P0 234 aaPredicted RBP8.89□□□□□ -0.99
SFSWAP-210ENST00000541286 H0Y9P7 68 aa8.89□□□□□ -0.99
SFSWAP-210ENST00000541286 PANO1I0J062 215 aa8.89□□□□□ -0.99
SFSWAP-210ENST00000541286 RBM12B-AS1Q9P1G2 102 aa8.89□□□□□ -0.99
SFSWAP-210ENST00000541286 A0A087WTM6 91 aa8.88□□□□□ -0.99
SFSWAP-210ENST00000541286 SPRR4Q96PI1 79 aa8.88□□□□□ -0.99
SFSWAP-210ENST00000541286 LRP1BQ9NZR2 4599 aa8.87□□□□□ -0.99
SFSWAP-210ENST00000541286 KRTAP11-1Q8IUC1 163 aa8.87□□□□□ -0.99
SFSWAP-210ENST00000541286 SPAG11AQ6PDA7 123 aa8.86□□□□□ -0.99
SFSWAP-210ENST00000541286 DNAH8Q96JB1 4490 aa8.86□□□□□ -0.99
SFSWAP-210ENST00000541286 DYNC1H1Q14204 4646 aaKnown RBP8.85□□□□□ -0.99
SFSWAP-210ENST00000541286 CYP4F30PQ9H0H9 118 aa8.85□□□□□ -0.99
SFSWAP-210ENST00000541286 H0Y9J4 135 aa8.83□□□□□ -1
SFSWAP-210ENST00000541286 NDUFB1O75438 58 aa8.82□□□□□ -1
SFSWAP-210ENST00000541286 CASC2Q6XLA1 102 aa8.82□□□□□ -1
SFSWAP-210ENST00000541286 FAT1Q14517 4588 aa8.81□□□□□ -1
SFSWAP-210ENST00000541286 IGLV9-49A0A0B4J1Y8 123 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms