RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 PSCAO43653 123 aa6.55□□□□□ -1.36
CDC42SE1-207ENST00000540998 IGFL1Q6UW32 110 aa6.55□□□□□ -1.36
CDC42SE1-207ENST00000540998 KRTAP11-1Q8IUC1 163 aa6.55□□□□□ -1.36
CDC42SE1-207ENST00000540998 CHTF8P0CG12 524 aa6.55□□□□□ -1.36
CDC42SE1-207ENST00000540998 C1orf64Q8NEQ6 169 aa6.55□□□□□ -1.36
CDC42SE1-207ENST00000540998 DNAH3Q8TD57 4116 aa6.55□□□□□ -1.36
CDC42SE1-207ENST00000540998 REG3GQ6UW15 175 aa6.54□□□□□ -1.36
CDC42SE1-207ENST00000540998 KRTAP1-5Q9BYS1 174 aa6.54□□□□□ -1.36
CDC42SE1-207ENST00000540998 PSPHP1O15172 72 aa6.53□□□□□ -1.36
CDC42SE1-207ENST00000540998 KRTAP24-1Q3LI83 254 aa6.53□□□□□ -1.36
CDC42SE1-207ENST00000540998 SPRR4Q96PI1 79 aa6.53□□□□□ -1.36
CDC42SE1-207ENST00000540998 TLX1NBP0CAT3 122 aa6.53□□□□□ -1.36
CDC42SE1-207ENST00000540998 ATP5EP56381 51 aaPredicted RBP6.53□□□□□ -1.36
CDC42SE1-207ENST00000540998 hDV103S1A0JD37 113 aa6.51□□□□□ -1.37
CDC42SE1-207ENST00000540998 HCG22E2RYF7 251 aa6.51□□□□□ -1.37
CDC42SE1-207ENST00000540998 A8MU10 97 aa6.5□□□□□ -1.37
CDC42SE1-207ENST00000540998 ZCCHC13Q8WW36 166 aaKnown RBP6.5□□□□□ -1.37
CDC42SE1-207ENST00000540998 PLA2G2DQ9UNK4 145 aa6.5□□□□□ -1.37
CDC42SE1-207ENST00000540998 IGLV5-37A0A075B6J1 123 aa6.49□□□□□ -1.37
CDC42SE1-207ENST00000540998 PHF5AQ7RTV0 110 aaKnown RBP6.49□□□□□ -1.37
CDC42SE1-207ENST00000540998 LCE6AA0A183 80 aa6.48□□□□□ -1.37
CDC42SE1-207ENST00000540998 LINC00208Q96KT6 92 aa6.48□□□□□ -1.37
CDC42SE1-207ENST00000540998 F8WDY8 70 aa6.46□□□□□ -1.38
CDC42SE1-207ENST00000540998 UBE2AP49459 152 aa6.46□□□□□ -1.38
CDC42SE1-207ENST00000540998 FRAS1Q86XX4 4008 aa6.44□□□□□ -1.38
CDC42SE1-207ENST00000540998 PANO1I0J062 215 aa6.44□□□□□ -1.38
CDC42SE1-207ENST00000540998 TRAV22A0A0B4J277 110 aa6.43□□□□□ -1.38
CDC42SE1-207ENST00000540998 A8MUN3 132 aa6.43□□□□□ -1.38
CDC42SE1-207ENST00000540998 CNBPP62633 177 aaKnown RBP6.42□□□□□ -1.38
CDC42SE1-207ENST00000540998 PLECQ15149 4684 aaKnown RBP6.42□□□□□ -1.38
CDC42SE1-207ENST00000540998 K7EIL1 84 aa6.41□□□□□ -1.38
CDC42SE1-207ENST00000540998 C16orf90A8MZG2 172 aa6.41□□□□□ -1.38
CDC42SE1-207ENST00000540998 H0Y9P7 68 aa6.41□□□□□ -1.38
CDC42SE1-207ENST00000540998 C1orf195Q5TG92 126 aa6.41□□□□□ -1.38
CDC42SE1-207ENST00000540998 CASC2Q6XLA1 102 aa6.41□□□□□ -1.38
CDC42SE1-207ENST00000540998 A0A1B0GW54 56 aa6.4□□□□□ -1.39
CDC42SE1-207ENST00000540998 H0Y9J4 135 aa6.4□□□□□ -1.39
CDC42SE1-207ENST00000540998 KRTAP29-1A8MX34 341 aaPredicted RBP6.39□□□□□ -1.39
CDC42SE1-207ENST00000540998 MP68P56378 58 aa6.39□□□□□ -1.39
CDC42SE1-207ENST00000540998 TGP01266 2768 aa6.39□□□□□ -1.39
CDC42SE1-207ENST00000540998 IGLV9-49A0A0B4J1Y8 123 aa6.38□□□□□ -1.39
CDC42SE1-207ENST00000540998 PCOTHQ58A44 107 aa6.37□□□□□ -1.39
CDC42SE1-207ENST00000540998 PRR15Q8IV56 129 aa6.37□□□□□ -1.39
CDC42SE1-207ENST00000540998 UBE2DNLQ8IWF7 75 aa6.37□□□□□ -1.39
CDC42SE1-207ENST00000540998 Q1T7F1 81 aa6.36□□□□□ -1.39
CDC42SE1-207ENST00000540998 B9D2Q9BPU9 175 aa6.36□□□□□ -1.39
CDC42SE1-207ENST00000540998 ANAPC11Q9NYG5 84 aa6.36□□□□□ -1.39
CDC42SE1-207ENST00000540998 LINC00472Q9H8W2 130 aa6.35□□□□□ -1.39
CDC42SE1-207ENST00000540998 IGLV8-61A0A075B6I0 122 aa6.34□□□□□ -1.39
CDC42SE1-207ENST00000540998 CYP4F30PQ9H0H9 118 aa6.34□□□□□ -1.39
CDC42SE1-207ENST00000540998 A8MWP4 228 aa6.33□□□□□ -1.4
CDC42SE1-207ENST00000540998 DNAH8Q96JB1 4490 aa6.32□□□□□ -1.4
CDC42SE1-207ENST00000540998 MMP24-AS1A0A0U1RRL7 71 aa6.32□□□□□ -1.4
CDC42SE1-207ENST00000540998 Q5VV11 94 aa6.32□□□□□ -1.4
CDC42SE1-207ENST00000540998 KMT2AQ03164 3969 aa6.31□□□□□ -1.4
CDC42SE1-207ENST00000540998 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.31□□□□□ -1.4
CDC42SE1-207ENST00000540998 PRR15LQ9BU68 103 aa6.3□□□□□ -1.4
CDC42SE1-207ENST00000540998 STARD9Q9P2P6 4700 aa6.3□□□□□ -1.4
CDC42SE1-207ENST00000540998 NDUFB1O75438 58 aa6.3□□□□□ -1.4
CDC42SE1-207ENST00000540998 A0A087X002 238 aa6.29□□□□□ -1.4
CDC42SE1-207ENST00000540998 CHKB-CPT1BH3BT56 60 aa6.29□□□□□ -1.4
CDC42SE1-207ENST00000540998 NOTCH2NLQ7Z3S9 236 aa6.29□□□□□ -1.4
CDC42SE1-207ENST00000540998 FBN3Q75N90 2809 aa6.29□□□□□ -1.4
CDC42SE1-207ENST00000540998 NDUFS5O43920 106 aa6.29□□□□□ -1.4
CDC42SE1-207ENST00000540998 Q8N9P0 234 aaPredicted RBP6.29□□□□□ -1.4
CDC42SE1-207ENST00000540998 MEGF8Q7Z7M0 2845 aa6.29□□□□□ -1.4
CDC42SE1-207ENST00000540998 IGHV6-1A0A0B4J1U7 121 aa6.28□□□□□ -1.4
CDC42SE1-207ENST00000540998 HECTD4Q9Y4D8 3996 aa6.28□□□□□ -1.4
CDC42SE1-207ENST00000540998 CD164Q04900 197 aa6.28□□□□□ -1.4
CDC42SE1-207ENST00000540998 MOBPQ13875 183 aa6.28□□□□□ -1.4
CDC42SE1-207ENST00000540998 C9orf163Q8N9P6 203 aa6.28□□□□□ -1.4
CDC42SE1-207ENST00000540998 V9GYY9 64 aa6.28□□□□□ -1.4
CDC42SE1-207ENST00000540998 Q96NJ1 140 aa6.27□□□□□ -1.41
CDC42SE1-207ENST00000540998 APLNQ9ULZ1 77 aa6.27□□□□□ -1.41
CDC42SE1-207ENST00000540998 COA5Q86WW8 74 aa6.26□□□□□ -1.41
CDC42SE1-207ENST00000540998 SPRR1BP22528 89 aa6.26□□□□□ -1.41
CDC42SE1-207ENST00000540998 SPTSSBQ8NFR3 76 aa6.26□□□□□ -1.41
CDC42SE1-207ENST00000540998 DNAH2Q9P225 4427 aa6.25□□□□□ -1.41
CDC42SE1-207ENST00000540998 DNAH17Q9UFH2 4485 aa6.25□□□□□ -1.41
CDC42SE1-207ENST00000540998 SPAG11AQ6PDA7 123 aa6.24□□□□□ -1.41
CDC42SE1-207ENST00000540998 PRKDCP78527 4128 aaKnown RBP6.24□□□□□ -1.41
CDC42SE1-207ENST00000540998 KRTAP13-1Q8IUC0 172 aa6.24□□□□□ -1.41
CDC42SE1-207ENST00000540998 SPINK6Q6UWN8 80 aa6.23□□□□□ -1.41
CDC42SE1-207ENST00000540998 PMAIP1Q13794 54 aa6.22□□□□□ -1.41
CDC42SE1-207ENST00000540998 LCA10Q71F78 164 aa6.22□□□□□ -1.41
CDC42SE1-207ENST00000540998 SPANXA2-OT1Q8N9U9 137 aa6.22□□□□□ -1.41
CDC42SE1-207ENST00000540998 MDFIQ99750 246 aa6.22□□□□□ -1.41
CDC42SE1-207ENST00000540998 DYNC2H1Q8NCM8 4307 aaKnown RBP6.22□□□□□ -1.41
CDC42SE1-207ENST00000540998 DNAH6Q9C0G6 4158 aa6.21□□□□□ -1.41
CDC42SE1-207ENST00000540998 C8orf17Q9NRJ1 99 aa6.21□□□□□ -1.41
CDC42SE1-207ENST00000540998 VPS13DQ5THJ4 4388 aa6.2□□□□□ -1.42
CDC42SE1-207ENST00000540998 NBDYA0A0U1RRE5 68 aa6.2□□□□□ -1.42
CDC42SE1-207ENST00000540998 SEC61GP60059 68 aa6.2□□□□□ -1.42
CDC42SE1-207ENST00000540998 A6NED7 52 aa6.2□□□□□ -1.42
CDC42SE1-207ENST00000540998 Q6ZRN7 208 aaPredicted RBP6.2□□□□□ -1.42
CDC42SE1-207ENST00000540998 C14orf177Q52M58 125 aa6.19□□□□□ -1.42
CDC42SE1-207ENST00000540998 PSORS1C2Q9UIG4 136 aa6.19□□□□□ -1.42
CDC42SE1-207ENST00000540998 IGLV7-46A0A075B6I9 117 aa6.18□□□□□ -1.42
CDC42SE1-207ENST00000540998 SPACA4Q8TDM5 124 aa6.18□□□□□ -1.42
CDC42SE1-207ENST00000540998 RETNLBQ9BQ08 111 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms