RNA–Protein interactions for RNA: ENST00000540725.5

SNHG1-213, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,374 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-213ENST00000540725 IGLV8-61A0A075B6I0 122 aa7.68□□□□□ -1.18
SNHG1-213ENST00000540725 C9orf118A6NHY6 69 aa7.68□□□□□ -1.18
SNHG1-213ENST00000540725 Q1RN00 199 aa7.68□□□□□ -1.18
SNHG1-213ENST00000540725 TTTY13Q9BZ97 58 aa7.68□□□□□ -1.18
SNHG1-213ENST00000540725 CD164Q04900 197 aa7.67□□□□□ -1.18
SNHG1-213ENST00000540725 CEND1Q8N111 149 aa7.67□□□□□ -1.18
SNHG1-213ENST00000540725 DEFB105AQ8NG35 78 aa7.66□□□□□ -1.18
SNHG1-213ENST00000540725 TEX49A0A1B0GTD5 131 aa7.65□□□□□ -1.18
SNHG1-213ENST00000540725 VAMP3Q15836 100 aa7.65□□□□□ -1.18
SNHG1-213ENST00000540725 FSIP2Q5CZC0 6907 aa7.64□□□□□ -1.19
SNHG1-213ENST00000540725 H7C2G1 150 aa7.64□□□□□ -1.19
SNHG1-213ENST00000540725 MT1HP80294 61 aa7.64□□□□□ -1.19
SNHG1-213ENST00000540725 TRBV7-6A0A0J9YX20 115 aa7.63□□□□□ -1.19
SNHG1-213ENST00000540725 A0A1B0GWB2 263 aa7.63□□□□□ -1.19
SNHG1-213ENST00000540725 Q6ZVH6 145 aa7.63□□□□□ -1.19
SNHG1-213ENST00000540725 GTF2H5Q6ZYL4 71 aa7.63□□□□□ -1.19
SNHG1-213ENST00000540725 CRCT1Q9UGL9 99 aa7.62□□□□□ -1.19
SNHG1-213ENST00000540725 FXYD2P54710 66 aa7.61□□□□□ -1.19
SNHG1-213ENST00000540725 Q5XG85 94 aa7.61□□□□□ -1.19
SNHG1-213ENST00000540725 SMIM29Q86T20 159 aa7.61□□□□□ -1.19
SNHG1-213ENST00000540725 C1orf195Q5TG92 126 aa7.6□□□□□ -1.19
SNHG1-213ENST00000540725 SCGB1D4Q6XE38 83 aa7.6□□□□□ -1.19
SNHG1-213ENST00000540725 IGLV5-48A0A075B6I7 105 aa7.59□□□□□ -1.19
SNHG1-213ENST00000540725 TMEM238LA0A1B0GVL6 79 aa7.59□□□□□ -1.19
SNHG1-213ENST00000540725 A0A1W2PPM0 123 aa7.59□□□□□ -1.19
SNHG1-213ENST00000540725 A6NJY4 79 aa7.59□□□□□ -1.19
SNHG1-213ENST00000540725 CFC1BP0CG36 223 aa7.59□□□□□ -1.19
SNHG1-213ENST00000540725 HIST1H4GQ99525 98 aa7.59□□□□□ -1.19
SNHG1-213ENST00000540725 A0A0G2JQZ4 141 aa7.59□□□□□ -1.2
SNHG1-213ENST00000540725 K7EP34 96 aa7.59□□□□□ -1.2
SNHG1-213ENST00000540725 COPS9Q8WXC6 57 aa7.59□□□□□ -1.2
SNHG1-213ENST00000540725 H3BUT2 72 aa7.58□□□□□ -1.2
SNHG1-213ENST00000540725 FABP2P12104 132 aa7.58□□□□□ -1.2
SNHG1-213ENST00000540725 IFITM1P13164 125 aa7.58□□□□□ -1.2
SNHG1-213ENST00000540725 NHP2Q9NX24 153 aaKnown RBP7.57□□□□□ -1.2
SNHG1-213ENST00000540725 A4D1N5 150 aa7.55□□□□□ -1.2
SNHG1-213ENST00000540725 RPL37P61927 97 aaKnown RBP7.55□□□□□ -1.2
SNHG1-213ENST00000540725 MUSTN1Q8IVN3 82 aa7.55□□□□□ -1.2
SNHG1-213ENST00000540725 RAB37Q96AX2 223 aa7.55□□□□□ -1.2
SNHG1-213ENST00000540725 SPCS1Q9Y6A9 102 aa7.54□□□□□ -1.2
SNHG1-213ENST00000540725 LORP23490 312 aaPredicted RBP7.53□□□□□ -1.2
SNHG1-213ENST00000540725 KRTAP10-6P60371 365 aaPredicted RBP7.53□□□□□ -1.2
SNHG1-213ENST00000540725 TRAV13-2A0A0B4J235 113 aa7.52□□□□□ -1.21
SNHG1-213ENST00000540725 SMIM11BQ8TCY0 68 aa7.52□□□□□ -1.21
SNHG1-213ENST00000540725 FLGP20930 4061 aaPredicted RBP7.52□□□□□ -1.21
SNHG1-213ENST00000540725 TCL1BO95988 128 aa7.51□□□□□ -1.21
SNHG1-213ENST00000540725 K7ERJ3 54 aa7.5□□□□□ -1.21
SNHG1-213ENST00000540725 LYRM7Q5U5X0 104 aa7.5□□□□□ -1.21
SNHG1-213ENST00000540725 F8W1H4 67 aa7.49□□□□□ -1.21
SNHG1-213ENST00000540725 K7ERU9 68 aa7.49□□□□□ -1.21
SNHG1-213ENST00000540725 M0R2T5 61 aa7.49□□□□□ -1.21
SNHG1-213ENST00000540725 COX6B2Q6YFQ2 88 aa7.49□□□□□ -1.21
SNHG1-213ENST00000540725 F8WEM9 126 aa7.48□□□□□ -1.21
SNHG1-213ENST00000540725 OCIAD2Q56VL3 154 aa7.48□□□□□ -1.21
SNHG1-213ENST00000540725 A0A0B4J2C4 111 aa7.47□□□□□ -1.21
SNHG1-213ENST00000540725 CFC1P0CG37 223 aa7.46□□□□□ -1.21
SNHG1-213ENST00000540725 NAA38Q9BRA0 125 aaKnown RBP7.46□□□□□ -1.21
SNHG1-213ENST00000540725 TRBV20-1A0A075B6N2 111 aa7.46□□□□□ -1.22
SNHG1-213ENST00000540725 PRO1854Q9UHT4 67 aa7.46□□□□□ -1.22
SNHG1-213ENST00000540725 LINC00575Q6W349 94 aa7.45□□□□□ -1.22
SNHG1-213ENST00000540725 Q6ZQY7 126 aa7.45□□□□□ -1.22
SNHG1-213ENST00000540725 Q6JHZ5 121 aa7.44□□□□□ -1.22
SNHG1-213ENST00000540725 CLEC2BQ92478 149 aa7.43□□□□□ -1.22
SNHG1-213ENST00000540725 TRBV7-7A0A0K0K1E9 115 aa7.42□□□□□ -1.22
SNHG1-213ENST00000540725 hADV29S1A0JD25 119 aa7.42□□□□□ -1.22
SNHG1-213ENST00000540725 IGFL1Q6UW32 110 aa7.42□□□□□ -1.22
SNHG1-213ENST00000540725 PRO0461Q9UI25 63 aa7.42□□□□□ -1.22
SNHG1-213ENST00000540725 H3BMG7 143 aa7.4□□□□□ -1.22
SNHG1-213ENST00000540725 OBSCN-AS1Q96MR7 158 aa7.39□□□□□ -1.23
SNHG1-213ENST00000540725 J3QR89 54 aa7.38□□□□□ -1.23
SNHG1-213ENST00000540725 ATP11AUNQ6ZP68 121 aa7.37□□□□□ -1.23
SNHG1-213ENST00000540725 Q75L30 129 aa7.37□□□□□ -1.23
SNHG1-213ENST00000540725 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.36□□□□□ -1.23
SNHG1-213ENST00000540725 PSMB2P49721 201 aa7.35□□□□□ -1.23
SNHG1-213ENST00000540725 SCGB1C2P0DMR2 95 aa7.34□□□□□ -1.23
SNHG1-213ENST00000540725 Q6Q795 121 aa7.34□□□□□ -1.23
SNHG1-213ENST00000540725 PPDPFLQ8WWR9 84 aa7.34□□□□□ -1.23
SNHG1-213ENST00000540725 VPS25Q9BRG1 176 aa7.34□□□□□ -1.23
SNHG1-213ENST00000540725 LST1O00453 97 aa7.33□□□□□ -1.24
SNHG1-213ENST00000540725 COX6CP09669 75 aa7.33□□□□□ -1.24
SNHG1-213ENST00000540725 SMCPP49901 116 aaPredicted RBP7.33□□□□□ -1.24
SNHG1-213ENST00000540725 ATXN8Q156A1 80 aa7.33□□□□□ -1.24
SNHG1-213ENST00000540725 ETDBQ3ZM63 59 aa7.32□□□□□ -1.24
SNHG1-213ENST00000540725 TEN1Q86WV5 123 aa7.32□□□□□ -1.24
SNHG1-213ENST00000540725 Q96NJ1 140 aa7.31□□□□□ -1.24
SNHG1-213ENST00000540725 TRIAP1O43715 76 aa7.3□□□□□ -1.24
SNHG1-213ENST00000540725 SS18L2Q9UHA2 77 aa7.29□□□□□ -1.24
SNHG1-213ENST00000540725 LCE2BO14633 110 aa7.28□□□□□ -1.24
SNHG1-213ENST00000540725 H3BT86 120 aa7.27□□□□□ -1.25
SNHG1-213ENST00000540725 ANKRD29Q8N6D5 301 aa7.26□□□□□ -1.25
SNHG1-213ENST00000540725 C20orf166-AS1Q96NR2 134 aa7.26□□□□□ -1.25
SNHG1-213ENST00000540725 C9JAW5 83 aa7.25□□□□□ -1.25
SNHG1-213ENST00000540725 A8MUU9 505 aa7.24□□□□□ -1.25
SNHG1-213ENST00000540725 PCP4P48539 62 aa7.24□□□□□ -1.25
SNHG1-213ENST00000540725 MTURNQ8N3F0 131 aa7.24□□□□□ -1.25
SNHG1-213ENST00000540725 SNCGO76070 127 aa7.22□□□□□ -1.25
SNHG1-213ENST00000540725 TRACP01848 142 aa7.22□□□□□ -1.25
SNHG1-213ENST00000540725 SCGB1A1P11684 91 aa7.22□□□□□ -1.25
SNHG1-213ENST00000540725 NDUFV3P56181 108 aaKnown RBP7.22□□□□□ -1.25
SNHG1-213ENST00000540725 SIGMAR1Q99720 223 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms