RNA–Protein interactions for RNA: ENST00000540537.5

CHFR-217, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-217ENST00000540537 Q6JHZ5 121 aa11.33□□□□□ -0.6
CHFR-217ENST00000540537 C12orf57Q99622 126 aa11.33□□□□□ -0.6
CHFR-217ENST00000540537 IGLV8-61A0A075B6I0 122 aa11.32□□□□□ -0.6
CHFR-217ENST00000540537 BVES-AS1Q5T3Y7 98 aa11.32□□□□□ -0.6
CHFR-217ENST00000540537 DLEU1O43261 78 aa11.31□□□□□ -0.6
CHFR-217ENST00000540537 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.31□□□□□ -0.6
CHFR-217ENST00000540537 PPDPFLQ8WWR9 84 aa11.29□□□□□ -0.6
CHFR-217ENST00000540537 CLEC2BQ92478 149 aa11.29□□□□□ -0.6
CHFR-217ENST00000540537 LCE2CQ5TA81 110 aa11.28□□□□□ -0.6
CHFR-217ENST00000540537 OCIAD2Q56VL3 154 aa11.27□□□□□ -0.61
CHFR-217ENST00000540537 IGFL1Q6UW32 110 aa11.27□□□□□ -0.61
CHFR-217ENST00000540537 KRTAP19-2Q3LHN2 52 aa11.26□□□□□ -0.61
CHFR-217ENST00000540537 TRBV7-7A0A0K0K1E9 115 aa11.25□□□□□ -0.61
CHFR-217ENST00000540537 RPL37P61927 97 aaKnown RBP11.25□□□□□ -0.61
CHFR-217ENST00000540537 CFC1BP0CG36 223 aa11.23□□□□□ -0.61
CHFR-217ENST00000540537 CFC1P0CG37 223 aa11.23□□□□□ -0.61
CHFR-217ENST00000540537 C14orf144Q96I85 54 aa11.22□□□□□ -0.61
CHFR-217ENST00000540537 SNHG12Q9BXW3 62 aa11.22□□□□□ -0.61
CHFR-217ENST00000540537 HIGD1BQ9P298 99 aa11.22□□□□□ -0.61
CHFR-217ENST00000540537 RAB37Q96AX2 223 aa11.21□□□□□ -0.61
CHFR-217ENST00000540537 PAM16Q9Y3D7 125 aa11.2□□□□□ -0.62
CHFR-217ENST00000540537 A0A0B4J2C4 111 aa11.19□□□□□ -0.62
CHFR-217ENST00000540537 SPATA45Q537H7 98 aa11.19□□□□□ -0.62
CHFR-217ENST00000540537 SNCGO76070 127 aa11.17□□□□□ -0.62
CHFR-217ENST00000540537 H0YGX0 51 aa11.16□□□□□ -0.62
CHFR-217ENST00000540537 H3BUT2 72 aa11.16□□□□□ -0.62
CHFR-217ENST00000540537 C2orf91Q6ZV80 131 aa11.16□□□□□ -0.62
CHFR-217ENST00000540537 VAMP8Q9BV40 100 aa11.16□□□□□ -0.62
CHFR-217ENST00000540537 MT1HP80294 61 aa11.15□□□□□ -0.62
CHFR-217ENST00000540537 KRTAP9-6A0A140TA67 174 aa11.13□□□□□ -0.63
CHFR-217ENST00000540537 LCE2DQ5TA82 110 aaPredicted RBP11.13□□□□□ -0.63
CHFR-217ENST00000540537 Q6Q795 121 aa11.12□□□□□ -0.63
CHFR-217ENST00000540537 FAM218AQ96MZ4 157 aa11.12□□□□□ -0.63
CHFR-217ENST00000540537 LST1O00453 97 aa11.1□□□□□ -0.63
CHFR-217ENST00000540537 CEND1Q8N111 149 aa11.1□□□□□ -0.63
CHFR-217ENST00000540537 NDUFV3P56181 108 aaKnown RBP11.09□□□□□ -0.63
CHFR-217ENST00000540537 SS18L2Q9UHA2 77 aa11.09□□□□□ -0.63
CHFR-217ENST00000540537 TMEM238LA0A1B0GVL6 79 aa11.08□□□□□ -0.64
CHFR-217ENST00000540537 A0A1B0GX51 115 aa11.08□□□□□ -0.64
CHFR-217ENST00000540537 A6NJY4 79 aa11.08□□□□□ -0.64
CHFR-217ENST00000540537 OBSCN-AS1Q96MR7 158 aa11.08□□□□□ -0.64
CHFR-217ENST00000540537 PRO1854Q9UHT4 67 aa11.07□□□□□ -0.64
CHFR-217ENST00000540537 GHRHP01286 108 aa11.06□□□□□ -0.64
CHFR-217ENST00000540537 TEN1Q86WV5 123 aa11.06□□□□□ -0.64
CHFR-217ENST00000540537 Q75L30 129 aa11.05□□□□□ -0.64
CHFR-217ENST00000540537 FXYD2P54710 66 aa11.03□□□□□ -0.64
CHFR-217ENST00000540537 FLGP20930 4061 aaPredicted RBP11.01□□□□□ -0.65
CHFR-217ENST00000540537 H3BMG7 143 aa11.01□□□□□ -0.65
CHFR-217ENST00000540537 COX6B2Q6YFQ2 88 aa11.01□□□□□ -0.65
CHFR-217ENST00000540537 ATP11AUNQ6ZP68 121 aa11.01□□□□□ -0.65
CHFR-217ENST00000540537 TRIAP1O43715 76 aa11□□□□□ -0.65
CHFR-217ENST00000540537 FABP2P12104 132 aa11□□□□□ -0.65
CHFR-217ENST00000540537 A0A087WSZ3 146 aa10.98□□□□□ -0.65
CHFR-217ENST00000540537 Q96NJ1 140 aa10.97□□□□□ -0.65
CHFR-217ENST00000540537 LORP23490 312 aaPredicted RBP10.96□□□□□ -0.65
CHFR-217ENST00000540537 KRTAP10-6P60371 365 aaPredicted RBP10.95□□□□□ -0.66
CHFR-217ENST00000540537 HSD52Q0P140 79 aa10.95□□□□□ -0.66
CHFR-217ENST00000540537 PYY3Q5JQD4 70 aa10.94□□□□□ -0.66
CHFR-217ENST00000540537 M0R2T5 61 aa10.93□□□□□ -0.66
CHFR-217ENST00000540537 C20orf166-AS1Q96NR2 134 aa10.93□□□□□ -0.66
CHFR-217ENST00000540537 H3BQ85 93 aa10.92□□□□□ -0.66
CHFR-217ENST00000540537 DNAL4O96015 105 aa10.92□□□□□ -0.66
CHFR-217ENST00000540537 A0A1W2PNM2 257 aa10.91□□□□□ -0.66
CHFR-217ENST00000540537 ORMDL1Q9P0S3 153 aa10.91□□□□□ -0.66
CHFR-217ENST00000540537 A8MUU9 505 aa10.89□□□□□ -0.67
CHFR-217ENST00000540537 K7ERJ3 54 aa10.89□□□□□ -0.67
CHFR-217ENST00000540537 PSMB2P49721 201 aa10.89□□□□□ -0.67
CHFR-217ENST00000540537 FSIP2Q5CZC0 6907 aa10.87□□□□□ -0.67
CHFR-217ENST00000540537 COX6CP09669 75 aa10.87□□□□□ -0.67
CHFR-217ENST00000540537 TRBV7-4A0A0J9YYF1 115 aa10.86□□□□□ -0.67
CHFR-217ENST00000540537 ANKRD29Q8N6D5 301 aa10.86□□□□□ -0.67
CHFR-217ENST00000540537 TMEM256-PLSCR3K7ERE1 68 aa10.85□□□□□ -0.67
CHFR-217ENST00000540537 SIGMAR1Q99720 223 aa10.85□□□□□ -0.67
CHFR-217ENST00000540537 CRCT1Q9UGL9 99 aa10.85□□□□□ -0.67
CHFR-217ENST00000540537 DSCR10P59022 87 aa10.83□□□□□ -0.68
CHFR-217ENST00000540537 UQCR10Q9UDW1 63 aa10.83□□□□□ -0.68
CHFR-217ENST00000540537 A0A1B0GV72 72 aa10.81□□□□□ -0.68
CHFR-217ENST00000540537 IGKV4-1P06312 121 aa10.79□□□□□ -0.68
CHFR-217ENST00000540537 LINC00313P59037 77 aa10.78□□□□□ -0.68
CHFR-217ENST00000540537 UBE2V1Q13404 147 aa10.78□□□□□ -0.68
CHFR-217ENST00000540537 TRACP01848 142 aa10.76□□□□□ -0.69
CHFR-217ENST00000540537 CCKP06307 115 aa10.76□□□□□ -0.69
CHFR-217ENST00000540537 LINC00472Q9H8W2 130 aa10.74□□□□□ -0.69
CHFR-217ENST00000540537 TMA7Q9Y2S6 64 aaKnown RBP10.74□□□□□ -0.69
CHFR-217ENST00000540537 KRTAP16-1A8MUX0 517 aa10.73□□□□□ -0.69
CHFR-217ENST00000540537 TRBV20-1A0A075B6N2 111 aa10.72□□□□□ -0.69
CHFR-217ENST00000540537 SCGB1C2P0DMR2 95 aa10.71□□□□□ -0.69
CHFR-217ENST00000540537 DEFB116Q30KQ4 102 aa10.69□□□□□ -0.7
CHFR-217ENST00000540537 RBM3P98179 157 aaKnown RBP10.68□□□□□ -0.7
CHFR-217ENST00000540537 NOTCH2NLQ7Z3S9 236 aa10.68□□□□□ -0.7
CHFR-217ENST00000540537 VPS25Q9BRG1 176 aa10.66□□□□□ -0.7
CHFR-217ENST00000540537 IGHV6-1A0A0B4J1U7 121 aa10.65□□□□□ -0.7
CHFR-217ENST00000540537 DSCR8Q96T75 97 aa10.65□□□□□ -0.7
CHFR-217ENST00000540537 C8orf87E5RJ46 101 aa10.61□□□□□ -0.71
CHFR-217ENST00000540537 BAALC-AS2P0C853 105 aa10.61□□□□□ -0.71
CHFR-217ENST00000540537 C21orf62-AS1Q17RA5 79 aa10.61□□□□□ -0.71
CHFR-217ENST00000540537 A0A1B0GVX0 72 aa10.6□□□□□ -0.71
CHFR-217ENST00000540537 C9JAW5 83 aa10.58□□□□□ -0.72
CHFR-217ENST00000540537 FAM236DA0A1B0GTK5 79 aa10.55□□□□□ -0.72
CHFR-217ENST00000540537 J3KT08 172 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms