RNA–Protein interactions for RNA: ENST00000540352.5

MDM2-226, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,315 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-226ENST00000540352 COL6A6A6NMZ7 2263 aa2.9□□□□□ -1.94
MDM2-226ENST00000540352 IGLV10-54A0A075B6I4 117 aa2.9□□□□□ -1.95
MDM2-226ENST00000540352 P0C880 135 aa2.9□□□□□ -1.95
MDM2-226ENST00000540352 ACYP2P14621 99 aa2.9□□□□□ -1.95
MDM2-226ENST00000540352 DEFB131AP59861 70 aa2.9□□□□□ -1.95
MDM2-226ENST00000540352 TACC2O95359 2948 aa2.89□□□□□ -1.95
MDM2-226ENST00000540352 DCHS2Q6V1P9 2916 aa2.89□□□□□ -1.95
MDM2-226ENST00000540352 GCN1Q92616 2671 aaKnown RBP2.89□□□□□ -1.95
MDM2-226ENST00000540352 A0A1B0GVY2 172 aa2.89□□□□□ -1.95
MDM2-226ENST00000540352 DOPEY2Q9Y3R5 2298 aa2.89□□□□□ -1.95
MDM2-226ENST00000540352 RP1L1Q8IWN7 2480 aaPredicted RBP2.89□□□□□ -1.95
MDM2-226ENST00000540352 UBR5O95071 2799 aaPredicted RBP2.88□□□□□ -1.95
MDM2-226ENST00000540352 NBASA2RRP1 2371 aa2.88□□□□□ -1.95
MDM2-226ENST00000540352 PCNX1Q96RV3 2341 aa2.88□□□□□ -1.95
MDM2-226ENST00000540352 WNK2Q9Y3S1 2297 aa2.88□□□□□ -1.95
MDM2-226ENST00000540352 CELSR2Q9HCU4 2923 aa2.88□□□□□ -1.95
MDM2-226ENST00000540352 IGKV2-24A0A0C4DH68 120 aa2.88□□□□□ -1.95
MDM2-226ENST00000540352 K7ERS5 55 aa2.88□□□□□ -1.95
MDM2-226ENST00000540352 DEFB116Q30KQ4 102 aa2.88□□□□□ -1.95
MDM2-226ENST00000540352 PCOTHQ58A44 107 aa2.88□□□□□ -1.95
MDM2-226ENST00000540352 UNQ6190/PRO20217Q6UXQ8 127 aa2.88□□□□□ -1.95
MDM2-226ENST00000540352 C16orf74Q96GX8 76 aa2.88□□□□□ -1.95
MDM2-226ENST00000540352 C20orf166-AS1Q96NR2 134 aa2.88□□□□□ -1.95
MDM2-226ENST00000540352 ADGRG4Q8IZF6 3080 aa2.88□□□□□ -1.95
MDM2-226ENST00000540352 ICE1Q9Y2F5 2266 aa2.87□□□□□ -1.95
MDM2-226ENST00000540352 CENPEQ02224 2701 aa2.87□□□□□ -1.95
MDM2-226ENST00000540352 MYO18BQ8IUG5 2567 aa2.87□□□□□ -1.95
MDM2-226ENST00000540352 IGLV8-61A0A075B6I0 122 aa2.87□□□□□ -1.95
MDM2-226ENST00000540352 A6NDX4 124 aa2.87□□□□□ -1.95
MDM2-226ENST00000540352 NUPR2A6NF83 97 aa2.87□□□□□ -1.95
MDM2-226ENST00000540352 ANGP03950 147 aaKnown RBP2.87□□□□□ -1.95
MDM2-226ENST00000540352 EGFEM1PQ0D2K5 195 aa2.87□□□□□ -1.95
MDM2-226ENST00000540352 DEFB105AQ8NG35 78 aa2.87□□□□□ -1.95
MDM2-226ENST00000540352 MAP1AP78559 2803 aaPredicted RBP2.87□□□□□ -1.95
MDM2-226ENST00000540352 FAM208BQ5VWN6 2430 aa2.86□□□□□ -1.95
MDM2-226ENST00000540352 ZNF462Q96JM2 2506 aa2.86□□□□□ -1.95
MDM2-226ENST00000540352 SPTA1P02549 2419 aa2.86□□□□□ -1.95
MDM2-226ENST00000540352 LYNX1G3V0Z9 82 aa2.86□□□□□ -1.95
MDM2-226ENST00000540352 CHTF8P0CG12 524 aa2.86□□□□□ -1.95
MDM2-226ENST00000540352 LYNX1P0DP58 116 aa2.86□□□□□ -1.95
MDM2-226ENST00000540352 CMC4P56277 68 aaPredicted RBP2.86□□□□□ -1.95
MDM2-226ENST00000540352 Q6ZRX8 168 aa2.86□□□□□ -1.95
MDM2-226ENST00000540352 SPTBN1Q01082 2364 aaKnown RBP2.86□□□□□ -1.95
MDM2-226ENST00000540352 HRNRQ86YZ3 2850 aaPredicted RBP2.85□□□□□ -1.95
MDM2-226ENST00000540352 HIVEP3Q5T1R4 2406 aa2.85□□□□□ -1.95
MDM2-226ENST00000540352 HELZ2Q9BYK8 2649 aaKnown RBP2.85□□□□□ -1.95
MDM2-226ENST00000540352 NBPF19A0A087WUL8 3843 aa2.85□□□□□ -1.95
MDM2-226ENST00000540352 MMP24-AS1A0A0U1RRL7 71 aa2.85□□□□□ -1.95
MDM2-226ENST00000540352 A8MUU9 505 aa2.85□□□□□ -1.95
MDM2-226ENST00000540352 DEFB113Q30KQ7 82 aa2.85□□□□□ -1.95
MDM2-226ENST00000540352 CAMK2N2Q96S95 79 aa2.85□□□□□ -1.95
MDM2-226ENST00000540352 C6orf48Q9UBA6 75 aa2.85□□□□□ -1.95
MDM2-226ENST00000540352 USP9XQ93008 2570 aaPredicted RBP2.84□□□□□ -1.95
MDM2-226ENST00000540352 KRTAP10-3P60369 221 aa2.84□□□□□ -1.96
MDM2-226ENST00000540352 LUZP6Q538Z0 58 aa2.84□□□□□ -1.96
MDM2-226ENST00000540352 CASC10Q5T4H9 136 aa2.84□□□□□ -1.96
MDM2-226ENST00000540352 KRTAP26-1Q6PEX3 210 aa2.84□□□□□ -1.96
MDM2-226ENST00000540352 CLPSL2Q6UWE3 100 aa2.84□□□□□ -1.96
MDM2-226ENST00000540352 NOP10Q9NPE3 64 aaKnown RBP2.84□□□□□ -1.96
MDM2-226ENST00000540352 ASH1LQ9NR48 2969 aaKnown RBP2.84□□□□□ -1.96
MDM2-226ENST00000540352 VPS13CQ709C8 3753 aa2.83□□□□□ -1.96
MDM2-226ENST00000540352 IGLV7-43P04211 117 aa2.83□□□□□ -1.96
MDM2-226ENST00000540352 SPRR1AP35321 89 aa2.83□□□□□ -1.96
MDM2-226ENST00000540352 IGFL1Q6UW32 110 aa2.83□□□□□ -1.96
MDM2-226ENST00000540352 LINC00472Q9H8W2 130 aa2.83□□□□□ -1.96
MDM2-226ENST00000540352 AKAP9Q99996 3911 aa2.82□□□□□ -1.96
MDM2-226ENST00000540352 FAM168BA1KXE4 195 aa2.82□□□□□ -1.96
MDM2-226ENST00000540352 KRTAP4-16G5E9R7 235 aaPredicted RBP2.82□□□□□ -1.96
MDM2-226ENST00000540352 H3BUX3 64 aa2.82□□□□□ -1.96
MDM2-226ENST00000540352 DNAH10OSP0CZ25 163 aa2.82□□□□□ -1.96
MDM2-226ENST00000540352 Q5W150 140 aa2.82□□□□□ -1.96
MDM2-226ENST00000540352 TYMSOSQ8TAI1 123 aa2.82□□□□□ -1.96
MDM2-226ENST00000540352 C8orf17Q9NRJ1 99 aa2.82□□□□□ -1.96
MDM2-226ENST00000540352 RPL37AP61513 92 aaKnown RBP2.81□□□□□ -1.96
MDM2-226ENST00000540352 ITPR2Q14571 2701 aa2.81□□□□□ -1.96
MDM2-226ENST00000540352 FASNP49327 2511 aaKnown RBP2.81□□□□□ -1.96
MDM2-226ENST00000540352 LRRK2Q5S007 2527 aa2.81□□□□□ -1.96
MDM2-226ENST00000540352 APCP25054 2843 aa2.81□□□□□ -1.96
MDM2-226ENST00000540352 USP9YO00507 2555 aaPredicted RBP2.8□□□□□ -1.96
MDM2-226ENST00000540352 TLX1NBP0CAT3 122 aa2.8□□□□□ -1.96
MDM2-226ENST00000540352 CCL19Q99731 98 aa2.8□□□□□ -1.96
MDM2-226ENST00000540352 SETXQ7Z333 2677 aaKnown RBP2.8□□□□□ -1.96
MDM2-226ENST00000540352 FBN2P35556 2912 aa2.8□□□□□ -1.96
MDM2-226ENST00000540352 SPTAN1Q13813 2472 aaKnown RBP2.8□□□□□ -1.96
MDM2-226ENST00000540352 BRD3OSQ6XYD6 125 aa2.79□□□□□ -1.96
MDM2-226ENST00000540352 PRO0255Q9UI72 69 aa2.79□□□□□ -1.96
MDM2-226ENST00000540352 WNK1Q9H4A3 2382 aa2.79□□□□□ -1.96
MDM2-226ENST00000540352 PDZD2O15018 2839 aa2.78□□□□□ -1.96
MDM2-226ENST00000540352 DOPEY1Q5JWR5 2465 aa2.78□□□□□ -1.96
MDM2-226ENST00000540352 A0A087WTM6 91 aa2.78□□□□□ -1.96
MDM2-226ENST00000540352 KRTAP9-6A8MVA2 160 aa2.78□□□□□ -1.96
MDM2-226ENST00000540352 SPINT4Q6UDR6 99 aa2.78□□□□□ -1.96
MDM2-226ENST00000540352 LINC00304Q8N9R0 145 aa2.78□□□□□ -1.96
MDM2-226ENST00000540352 CSMD2Q7Z408 3487 aa2.78□□□□□ -1.96
MDM2-226ENST00000540352 CELSR1Q9NYQ6 3014 aa2.78□□□□□ -1.96
MDM2-226ENST00000540352 PKDREJQ9NTG1 2253 aa2.78□□□□□ -1.96
MDM2-226ENST00000540352 BAHCC1Q9P281 2608 aa2.78□□□□□ -1.96
MDM2-226ENST00000540352 HECTD1Q9ULT8 2610 aa2.78□□□□□ -1.96
MDM2-226ENST00000540352 ALMS1Q8TCU4 4167 aa2.77□□□□□ -1.97
MDM2-226ENST00000540352 J3QKU1 62 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 142.4 ms