RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 PDZD2O15018 2839 aa4□□□□□ -1.77
PTPRD-214ENST00000540109 LINC01556Q5JQF7 62 aa4□□□□□ -1.77
PTPRD-214ENST00000540109 TLN2Q9Y4G6 2542 aa3.99□□□□□ -1.77
PTPRD-214ENST00000540109 TLX1NBP0CAT3 122 aa3.99□□□□□ -1.77
PTPRD-214ENST00000540109 SPRR4Q96PI1 79 aa3.99□□□□□ -1.77
PTPRD-214ENST00000540109 PRR34Q9NV39 138 aa3.99□□□□□ -1.77
PTPRD-214ENST00000540109 CENPEQ02224 2701 aa3.99□□□□□ -1.77
PTPRD-214ENST00000540109 IGKV2D-30A0A075B6S6 120 aa3.99□□□□□ -1.77
PTPRD-214ENST00000540109 IGKV2-30P06310 120 aa3.99□□□□□ -1.77
PTPRD-214ENST00000540109 C22orf24Q9Y442 160 aa3.98□□□□□ -1.77
PTPRD-214ENST00000540109 COL12A1Q99715 3063 aa3.98□□□□□ -1.77
PTPRD-214ENST00000540109 KRTAP16-1A8MUX0 517 aa3.98□□□□□ -1.77
PTPRD-214ENST00000540109 SONP18583 2426 aaKnown RBP3.98□□□□□ -1.77
PTPRD-214ENST00000540109 CHD6Q8TD26 2715 aa3.98□□□□□ -1.77
PTPRD-214ENST00000540109 IGLV5-37A0A075B6J1 123 aa3.97□□□□□ -1.77
PTPRD-214ENST00000540109 A8MU10 97 aa3.97□□□□□ -1.77
PTPRD-214ENST00000540109 LUZP6Q538Z0 58 aa3.97□□□□□ -1.77
PTPRD-214ENST00000540109 HELZ2Q9BYK8 2649 aaKnown RBP3.96□□□□□ -1.77
PTPRD-214ENST00000540109 MXRA5Q9NR99 2828 aa3.96□□□□□ -1.78
PTPRD-214ENST00000540109 A0A0G2JQZ4 141 aa3.96□□□□□ -1.78
PTPRD-214ENST00000540109 A0A1W2PNN7 141 aa3.96□□□□□ -1.78
PTPRD-214ENST00000540109 SPINK7P58062 85 aa3.96□□□□□ -1.78
PTPRD-214ENST00000540109 KRTAP24-1Q3LI83 254 aa3.96□□□□□ -1.78
PTPRD-214ENST00000540109 RELNP78509 3460 aa3.95□□□□□ -1.78
PTPRD-214ENST00000540109 TENM4Q6N022 2769 aa3.95□□□□□ -1.78
PTPRD-214ENST00000540109 NUPR2A6NF83 97 aa3.95□□□□□ -1.78
PTPRD-214ENST00000540109 ANK3Q12955 4377 aaKnown RBP3.95□□□□□ -1.78
PTPRD-214ENST00000540109 C15orf56Q8N910 161 aa3.95□□□□□ -1.78
PTPRD-214ENST00000540109 FASNP49327 2511 aaKnown RBP3.95□□□□□ -1.78
PTPRD-214ENST00000540109 ZANQ9Y493 2812 aa3.94□□□□□ -1.78
PTPRD-214ENST00000540109 CIRBP-AS1Q8TBR5 109 aa3.94□□□□□ -1.78
PTPRD-214ENST00000540109 C8orf17Q9NRJ1 99 aa3.94□□□□□ -1.78
PTPRD-214ENST00000540109 TNP2Q05952 138 aa3.94□□□□□ -1.78
PTPRD-214ENST00000540109 ADM2Q7Z4H4 148 aa3.94□□□□□ -1.78
PTPRD-214ENST00000540109 MTORP42345 2549 aa3.92□□□□□ -1.78
PTPRD-214ENST00000540109 A0A1B0GVX0 72 aa3.92□□□□□ -1.78
PTPRD-214ENST00000540109 ACANP16112 2415 aa3.92□□□□□ -1.78
PTPRD-214ENST00000540109 KRTAP10-11P60412 298 aa3.92□□□□□ -1.78
PTPRD-214ENST00000540109 CELSR2Q9HCU4 2923 aa3.92□□□□□ -1.78
PTPRD-214ENST00000540109 C9orf163Q8N9P6 203 aa3.92□□□□□ -1.78
PTPRD-214ENST00000540109 DNAH10OSP0CZ25 163 aa3.92□□□□□ -1.78
PTPRD-214ENST00000540109 IGLV1-50A0A075B6I6 118 aa3.91□□□□□ -1.78
PTPRD-214ENST00000540109 LCE6AA0A183 80 aa3.91□□□□□ -1.78
PTPRD-214ENST00000540109 NSD1Q96L73 2696 aaPredicted RBP3.91□□□□□ -1.78
PTPRD-214ENST00000540109 CHTF8P0CG12 524 aa3.91□□□□□ -1.78
PTPRD-214ENST00000540109 CELSR1Q9NYQ6 3014 aa3.91□□□□□ -1.78
PTPRD-214ENST00000540109 FN1P02751 2386 aaKnown RBP3.9□□□□□ -1.79
PTPRD-214ENST00000540109 SETXQ7Z333 2677 aaKnown RBP3.9□□□□□ -1.79
PTPRD-214ENST00000540109 Q8N377 158 aa3.9□□□□□ -1.79
PTPRD-214ENST00000540109 A6NN06 94 aa3.89□□□□□ -1.79
PTPRD-214ENST00000540109 ITPR2Q14571 2701 aa3.89□□□□□ -1.79
PTPRD-214ENST00000540109 NOTCH2NLQ7Z3S9 236 aa3.89□□□□□ -1.79
PTPRD-214ENST00000540109 ZCCHC13Q8WW36 166 aaKnown RBP3.89□□□□□ -1.79
PTPRD-214ENST00000540109 A0A1W2PNM2 257 aa3.89□□□□□ -1.79
PTPRD-214ENST00000540109 ASH1LQ9NR48 2969 aaKnown RBP3.88□□□□□ -1.79
PTPRD-214ENST00000540109 IGFL1Q6UW32 110 aa3.88□□□□□ -1.79
PTPRD-214ENST00000540109 CRYBG3Q68DQ2 2970 aa3.88□□□□□ -1.79
PTPRD-214ENST00000540109 APLNQ9ULZ1 77 aa3.87□□□□□ -1.79
PTPRD-214ENST00000540109 GCN1Q92616 2671 aaKnown RBP3.87□□□□□ -1.79
PTPRD-214ENST00000540109 KRTAP26-1Q6PEX3 210 aa3.87□□□□□ -1.79
PTPRD-214ENST00000540109 HECTD1Q9ULT8 2610 aa3.87□□□□□ -1.79
PTPRD-214ENST00000540109 JMJD1CQ15652 2540 aa3.86□□□□□ -1.79
PTPRD-214ENST00000540109 NDUFAF8A1L188 74 aa3.86□□□□□ -1.79
PTPRD-214ENST00000540109 DSCR10P59022 87 aa3.86□□□□□ -1.79
PTPRD-214ENST00000540109 SPRR1BP22528 89 aa3.86□□□□□ -1.79
PTPRD-214ENST00000540109 AKAP9Q99996 3911 aa3.86□□□□□ -1.79
PTPRD-214ENST00000540109 MAP1AP78559 2803 aaPredicted RBP3.86□□□□□ -1.79
PTPRD-214ENST00000540109 FAM168BA1KXE4 195 aa3.85□□□□□ -1.79
PTPRD-214ENST00000540109 SPATA8Q6RVD6 105 aa3.84□□□□□ -1.79
PTPRD-214ENST00000540109 LY6G6CO95867 125 aa3.84□□□□□ -1.79
PTPRD-214ENST00000540109 SETD2Q9BYW2 2564 aaPredicted RBP3.84□□□□□ -1.8
PTPRD-214ENST00000540109 K7EIL1 84 aa3.84□□□□□ -1.8
PTPRD-214ENST00000540109 TEP1Q99973 2627 aaKnown RBP3.83□□□□□ -1.8
PTPRD-214ENST00000540109 A0A0D9SG42 100 aa3.83□□□□□ -1.8
PTPRD-214ENST00000540109 CNBPP62633 177 aaKnown RBP3.83□□□□□ -1.8
PTPRD-214ENST00000540109 HRES1P13985 223 aa3.83□□□□□ -1.8
PTPRD-214ENST00000540109 RTL8CO15255 209 aa3.82□□□□□ -1.8
PTPRD-214ENST00000540109 OTOGQ6ZRI0 2925 aa3.82□□□□□ -1.8
PTPRD-214ENST00000540109 J3QL48 77 aa3.82□□□□□ -1.8
PTPRD-214ENST00000540109 SPRR1AP35321 89 aa3.82□□□□□ -1.8
PTPRD-214ENST00000540109 COX6B2Q6YFQ2 88 aa3.82□□□□□ -1.8
PTPRD-214ENST00000540109 SVEP1Q4LDE5 3571 aa3.82□□□□□ -1.8
PTPRD-214ENST00000540109 HIVEP1P15822 2718 aa3.82□□□□□ -1.8
PTPRD-214ENST00000540109 FLG2Q5D862 2391 aaPredicted RBP3.81□□□□□ -1.8
PTPRD-214ENST00000540109 CAMK2N1Q7Z7J9 78 aa3.81□□□□□ -1.8
PTPRD-214ENST00000540109 Q6ZR54 194 aa3.8□□□□□ -1.8
PTPRD-214ENST00000540109 VPS13CQ709C8 3753 aa3.79□□□□□ -1.8
PTPRD-214ENST00000540109 NF1P21359 2839 aa3.79□□□□□ -1.8
PTPRD-214ENST00000540109 ATRQ13535 2644 aa3.79□□□□□ -1.8
PTPRD-214ENST00000540109 A0A1B0GU33 70 aa3.78□□□□□ -1.8
PTPRD-214ENST00000540109 SEC61BP60468 96 aaKnown RBP3.78□□□□□ -1.8
PTPRD-214ENST00000540109 MMP24-AS1A0A0U1RRL7 71 aa3.77□□□□□ -1.81
PTPRD-214ENST00000540109 SPACA4Q8TDM5 124 aa3.77□□□□□ -1.81
PTPRD-214ENST00000540109 Q8NDZ9 215 aa3.77□□□□□ -1.81
PTPRD-214ENST00000540109 CSMD1Q96PZ7 3565 aa3.77□□□□□ -1.81
PTPRD-214ENST00000540109 IGLV7-43P04211 117 aa3.77□□□□□ -1.81
PTPRD-214ENST00000540109 Q8N1X5 172 aa3.76□□□□□ -1.81
PTPRD-214ENST00000540109 NBPF19A0A087WUL8 3843 aa3.75□□□□□ -1.81
PTPRD-214ENST00000540109 KRTAP29-1A8MX34 341 aaPredicted RBP3.75□□□□□ -1.81
PTPRD-214ENST00000540109 LINC00472Q9H8W2 130 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms