RNA–Protein interactions for RNA: ENST00000539988.1

AC008115.2-201, humanhuman

TSL 3 BASIC

Gene AC008115.2, Length 241 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008115.2-201ENST00000539988 CSMD3Q7Z407 3707 aa0.82□□□□□ -2.28
AC008115.2-201ENST00000539988 VWFP04275 2813 aa0.82□□□□□ -2.28
AC008115.2-201ENST00000539988 NCOR1O75376 2440 aa0.82□□□□□ -2.28
AC008115.2-201ENST00000539988 CEP290O15078 2479 aa0.82□□□□□ -2.28
AC008115.2-201ENST00000539988 CHD6Q8TD26 2715 aa0.82□□□□□ -2.28
AC008115.2-201ENST00000539988 A0A0C4DFX4 3053 aa0.81□□□□□ -2.28
AC008115.2-201ENST00000539988 PRRC2CQ9Y520 2896 aaKnown RBP0.81□□□□□ -2.28
AC008115.2-201ENST00000539988 ANK2Q01484 3957 aa0.81□□□□□ -2.28
AC008115.2-201ENST00000539988 WT1-ASQ06250 92 aa0.81□□□□□ -2.28
AC008115.2-201ENST00000539988 BDP1A6H8Y1 2624 aa0.81□□□□□ -2.28
AC008115.2-201ENST00000539988 WFDC10BQ8IUB3 73 aa0.8□□□□□ -2.28
AC008115.2-201ENST00000539988 PIEZO1Q92508 2521 aa0.8□□□□□ -2.28
AC008115.2-201ENST00000539988 KAAG1Q9UBP8 84 aa0.79□□□□□ -2.28
AC008115.2-201ENST00000539988 S4R3F8 94 aa0.79□□□□□ -2.28
AC008115.2-201ENST00000539988 AKAP6Q13023 2319 aa0.79□□□□□ -2.28
AC008115.2-201ENST00000539988 FBN2P35556 2912 aa0.79□□□□□ -2.28
AC008115.2-201ENST00000539988 SPTA1P02549 2419 aa0.79□□□□□ -2.28
AC008115.2-201ENST00000539988 LCE1CQ5T751 118 aa0.78□□□□□ -2.28
AC008115.2-201ENST00000539988 LCE1BQ5T7P3 118 aa0.78□□□□□ -2.28
AC008115.2-201ENST00000539988 LCE3AQ5TA76 89 aa0.78□□□□□ -2.28
AC008115.2-201ENST00000539988 KRTAP5-11Q6L8G4 156 aa0.78□□□□□ -2.28
AC008115.2-201ENST00000539988 KRTAP5-5Q701N2 237 aaPredicted RBP0.78□□□□□ -2.28
AC008115.2-201ENST00000539988 CELSR1Q9NYQ6 3014 aa0.78□□□□□ -2.28
AC008115.2-201ENST00000539988 AKAP13Q12802 2813 aa0.78□□□□□ -2.29
AC008115.2-201ENST00000539988 OTOGQ6ZRI0 2925 aa0.78□□□□□ -2.29
AC008115.2-201ENST00000539988 IGLV5-48A0A075B6I7 105 aa0.77□□□□□ -2.29
AC008115.2-201ENST00000539988 MMP24-AS1A0A0U1RRL7 71 aa0.77□□□□□ -2.29
AC008115.2-201ENST00000539988 BSNQ9UPA5 3926 aa0.77□□□□□ -2.29
AC008115.2-201ENST00000539988 PRKDCP78527 4128 aaKnown RBP0.77□□□□□ -2.29
AC008115.2-201ENST00000539988 FRAS1Q86XX4 4008 aa0.76□□□□□ -2.29
AC008115.2-201ENST00000539988 DEFB109BQ30KR1 87 aa0.75□□□□□ -2.29
AC008115.2-201ENST00000539988 DEFB106AQ8N104 65 aa0.75□□□□□ -2.29
AC008115.2-201ENST00000539988 TENM4Q6N022 2769 aa0.75□□□□□ -2.29
AC008115.2-201ENST00000539988 EP300Q09472 2414 aaPredicted RBP0.75□□□□□ -2.29
AC008115.2-201ENST00000539988 PRLHP81277 87 aa0.74□□□□□ -2.29
AC008115.2-201ENST00000539988 KRTAP5-1Q6L8H4 278 aa0.74□□□□□ -2.29
AC008115.2-201ENST00000539988 SRRM2Q9UQ35 2752 aaKnown RBP0.74□□□□□ -2.29
AC008115.2-201ENST00000539988 LYSTQ99698 3801 aa0.74□□□□□ -2.29
AC008115.2-201ENST00000539988 PDZD2O15018 2839 aa0.74□□□□□ -2.29
AC008115.2-201ENST00000539988 HECTD1Q9ULT8 2610 aa0.73□□□□□ -2.29
AC008115.2-201ENST00000539988 TNRC18O15417 2968 aaPredicted RBP0.73□□□□□ -2.29
AC008115.2-201ENST00000539988 UBR5O95071 2799 aaPredicted RBP0.73□□□□□ -2.29
AC008115.2-201ENST00000539988 TNXBP22105 4242 aa0.73□□□□□ -2.29
AC008115.2-201ENST00000539988 H3BUA1 57 aa0.73□□□□□ -2.29
AC008115.2-201ENST00000539988 PKD1L2Q7Z442 2459 aa0.73□□□□□ -2.29
AC008115.2-201ENST00000539988 NBASA2RRP1 2371 aa0.72□□□□□ -2.29
AC008115.2-201ENST00000539988 ZNF469Q96JG9 3925 aaPredicted RBP0.72□□□□□ -2.29
AC008115.2-201ENST00000539988 POLR2KP53803 58 aaKnown RBP0.72□□□□□ -2.29
AC008115.2-201ENST00000539988 RPL39P62891 51 aaKnown RBP0.72□□□□□ -2.29
AC008115.2-201ENST00000539988 CHD7Q9P2D1 2997 aa0.72□□□□□ -2.29
AC008115.2-201ENST00000539988 FAT2Q9NYQ8 4349 aa0.71□□□□□ -2.3
AC008115.2-201ENST00000539988 DEFB131AP59861 70 aa0.71□□□□□ -2.3
AC008115.2-201ENST00000539988 KRTAP2-3P0C7H8 128 aa0.7□□□□□ -2.3
AC008115.2-201ENST00000539988 SMR3AQ99954 134 aa0.7□□□□□ -2.3
AC008115.2-201ENST00000539988 KRTAP2-4Q9BYR9 128 aa0.7□□□□□ -2.3
AC008115.2-201ENST00000539988 KRTAP2-1Q9BYU5 128 aa0.7□□□□□ -2.3
AC008115.2-201ENST00000539988 APCP25054 2843 aa0.7□□□□□ -2.3
AC008115.2-201ENST00000539988 VPS13BQ7Z7G8 4022 aa0.7□□□□□ -2.3
AC008115.2-201ENST00000539988 NAV2Q8IVL1 2488 aa0.7□□□□□ -2.3
AC008115.2-201ENST00000539988 FBN3Q75N90 2809 aa0.7□□□□□ -2.3
AC008115.2-201ENST00000539988 CREBBPQ92793 2442 aa0.69□□□□□ -2.3
AC008115.2-201ENST00000539988 WNK1Q9H4A3 2382 aa0.69□□□□□ -2.3
AC008115.2-201ENST00000539988 RPL39LQ96EH5 51 aaKnown RBP0.69□□□□□ -2.3
AC008115.2-201ENST00000539988 CHD8Q9HCK8 2581 aa0.69□□□□□ -2.3
AC008115.2-201ENST00000539988 KRTAP19-3Q7Z4W3 81 aa0.68□□□□□ -2.3
AC008115.2-201ENST00000539988 SETD2Q9BYW2 2564 aaPredicted RBP0.67□□□□□ -2.3
AC008115.2-201ENST00000539988 COL6A5A8TX70 2615 aa0.67□□□□□ -2.3
AC008115.2-201ENST00000539988 CLPSL2Q6UWE3 100 aa0.67□□□□□ -2.3
AC008115.2-201ENST00000539988 ARHGAP5-AS1Q96IT6 56 aa0.67□□□□□ -2.3
AC008115.2-201ENST00000539988 DNAH11Q96DT5 4516 aa0.66□□□□□ -2.3
AC008115.2-201ENST00000539988 MAP1BP46821 2468 aaKnown RBP0.66□□□□□ -2.3
AC008115.2-201ENST00000539988 PKD1L1Q8TDX9 2849 aa0.66□□□□□ -2.3
AC008115.2-201ENST00000539988 NOTCH1P46531 2555 aa0.66□□□□□ -2.3
AC008115.2-201ENST00000539988 TENM2Q9NT68 2774 aa0.66□□□□□ -2.3
AC008115.2-201ENST00000539988 KMT2AQ03164 3969 aa0.65□□□□□ -2.31
AC008115.2-201ENST00000539988 SACSQ9NZJ4 4579 aa0.65□□□□□ -2.31
AC008115.2-201ENST00000539988 CCDC168Q8NDH2 2452 aa0.64□□□□□ -2.31
AC008115.2-201ENST00000539988 GCN1Q92616 2671 aaKnown RBP0.64□□□□□ -2.31
AC008115.2-201ENST00000539988 ZZEF1O43149 2961 aa0.64□□□□□ -2.31
AC008115.2-201ENST00000539988 SPINK1P00995 79 aa0.64□□□□□ -2.31
AC008115.2-201ENST00000539988 DEFB135Q30KP9 77 aa0.64□□□□□ -2.31
AC008115.2-201ENST00000539988 SPINK6Q6UWN8 80 aa0.64□□□□□ -2.31
AC008115.2-201ENST00000539988 LEAP2Q969E1 77 aa0.64□□□□□ -2.31
AC008115.2-201ENST00000539988 NOP10Q9NPE3 64 aaKnown RBP0.64□□□□□ -2.31
AC008115.2-201ENST00000539988 ZFYVE26Q68DK2 2539 aa0.64□□□□□ -2.31
AC008115.2-201ENST00000539988 HIVEP3Q5T1R4 2406 aa0.64□□□□□ -2.31
AC008115.2-201ENST00000539988 ACACAQ13085 2346 aa0.64□□□□□ -2.31
AC008115.2-201ENST00000539988 FLNCQ14315 2725 aa0.63□□□□□ -2.31
AC008115.2-201ENST00000539988 UNC79Q9P2D8 2635 aa0.63□□□□□ -2.31
AC008115.2-201ENST00000539988 A8MTW9 85 aa0.63□□□□□ -2.31
AC008115.2-201ENST00000539988 KRTAP17-1Q9BYP8 105 aa0.63□□□□□ -2.31
AC008115.2-201ENST00000539988 TTTY10Q9BZA0 68 aa0.63□□□□□ -2.31
AC008115.2-201ENST00000539988 HUWE1Q7Z6Z7 4374 aaKnown RBP0.62□□□□□ -2.31
AC008115.2-201ENST00000539988 NF1P21359 2839 aa0.62□□□□□ -2.31
AC008115.2-201ENST00000539988 H3BSH0 61 aa0.62□□□□□ -2.31
AC008115.2-201ENST00000539988 M0R2T5 61 aa0.62□□□□□ -2.31
AC008115.2-201ENST00000539988 PRM1P04553 51 aa0.62□□□□□ -2.31
AC008115.2-201ENST00000539988 MUC19Q7Z5P9 8384 aa0.62□□□□□ -2.31
AC008115.2-201ENST00000539988 NOTCH2Q04721 2471 aa0.61□□□□□ -2.31
AC008115.2-201ENST00000539988 VPS13DQ5THJ4 4388 aa0.61□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms