RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 ST20-AS1Q8NBB2 130 aa6.36□□□□□ -1.39
SPARC-209ENST00000539687 Q8NBF4 154 aa6.36□□□□□ -1.39
SPARC-209ENST00000539687 ZNF706Q9Y5V0 76 aaPredicted RBP6.36□□□□□ -1.39
SPARC-209ENST00000539687 PLECQ15149 4684 aaKnown RBP6.35□□□□□ -1.39
SPARC-209ENST00000539687 IGLV8-61A0A075B6I0 122 aa6.35□□□□□ -1.39
SPARC-209ENST00000539687 HAMPP81172 84 aa6.35□□□□□ -1.39
SPARC-209ENST00000539687 NREPQ16612 68 aa6.35□□□□□ -1.39
SPARC-209ENST00000539687 PLAC8Q9NZF1 115 aa6.35□□□□□ -1.39
SPARC-209ENST00000539687 TENM2Q9NT68 2774 aa6.35□□□□□ -1.39
SPARC-209ENST00000539687 LCE6AA0A183 80 aa6.34□□□□□ -1.39
SPARC-209ENST00000539687 SPRR4Q96PI1 79 aa6.34□□□□□ -1.39
SPARC-209ENST00000539687 VPS13DQ5THJ4 4388 aa6.34□□□□□ -1.4
SPARC-209ENST00000539687 SMIM20Q8N5G0 67 aa6.33□□□□□ -1.4
SPARC-209ENST00000539687 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.33□□□□□ -1.4
SPARC-209ENST00000539687 RPL37AP61513 92 aaKnown RBP6.32□□□□□ -1.4
SPARC-209ENST00000539687 SMIM29Q86T20 159 aa6.32□□□□□ -1.4
SPARC-209ENST00000539687 KRTAP4-8Q9BYQ9 185 aa6.32□□□□□ -1.4
SPARC-209ENST00000539687 CRYGAP11844 174 aa6.31□□□□□ -1.4
SPARC-209ENST00000539687 KRTAP13-1Q8IUC0 172 aa6.31□□□□□ -1.4
SPARC-209ENST00000539687 STARD9Q9P2P6 4700 aa6.3□□□□□ -1.4
SPARC-209ENST00000539687 BPY2O14599 106 aa6.3□□□□□ -1.4
SPARC-209ENST00000539687 UQCRQO14949 82 aa6.3□□□□□ -1.4
SPARC-209ENST00000539687 C3orf22Q8N5N4 141 aa6.3□□□□□ -1.4
SPARC-209ENST00000539687 DNAH7Q8WXX0 4024 aa6.3□□□□□ -1.4
SPARC-209ENST00000539687 A0A1W2PNM2 257 aa6.29□□□□□ -1.4
SPARC-209ENST00000539687 PANO1I0J062 215 aa6.29□□□□□ -1.4
SPARC-209ENST00000539687 KRTAP11-1Q8IUC1 163 aa6.28□□□□□ -1.4
SPARC-209ENST00000539687 HYDINQ4G0P3 5121 aa6.28□□□□□ -1.4
SPARC-209ENST00000539687 COX7CP15954 63 aa6.27□□□□□ -1.41
SPARC-209ENST00000539687 IGFL1Q6UW32 110 aa6.27□□□□□ -1.41
SPARC-209ENST00000539687 SERP2Q8N6R1 65 aa6.27□□□□□ -1.41
SPARC-209ENST00000539687 LYSTQ99698 3801 aa6.27□□□□□ -1.41
SPARC-209ENST00000539687 A0A087WVE0 104 aa6.26□□□□□ -1.41
SPARC-209ENST00000539687 ZNF861PO60384 105 aa6.26□□□□□ -1.41
SPARC-209ENST00000539687 LINC00483Q53H64 154 aa6.26□□□□□ -1.41
SPARC-209ENST00000539687 DNAH10Q8IVF4 4471 aa6.25□□□□□ -1.41
SPARC-209ENST00000539687 PSORS1C2Q9UIG4 136 aa6.25□□□□□ -1.41
SPARC-209ENST00000539687 CSMD3Q7Z407 3707 aa6.23□□□□□ -1.41
SPARC-209ENST00000539687 C9orf153Q5TBE3 101 aa6.23□□□□□ -1.41
SPARC-209ENST00000539687 DNAH6Q9C0G6 4158 aa6.23□□□□□ -1.41
SPARC-209ENST00000539687 PCLOQ9Y6V0 5065 aa6.22□□□□□ -1.41
SPARC-209ENST00000539687 TRAV7A0A075B6U4 112 aa6.22□□□□□ -1.41
SPARC-209ENST00000539687 CCDC179H3BU77 68 aa6.22□□□□□ -1.41
SPARC-209ENST00000539687 LINC00336Q6ZUF6 198 aa6.22□□□□□ -1.41
SPARC-209ENST00000539687 HERC2O95714 4834 aa6.21□□□□□ -1.41
SPARC-209ENST00000539687 IGLV7-43P04211 117 aa6.21□□□□□ -1.42
SPARC-209ENST00000539687 Q6ZSA8 131 aa6.21□□□□□ -1.42
SPARC-209ENST00000539687 ALMS1Q8TCU4 4167 aa6.21□□□□□ -1.42
SPARC-209ENST00000539687 J3KT08 172 aa6.2□□□□□ -1.42
SPARC-209ENST00000539687 IGKV4-1P06312 121 aa6.2□□□□□ -1.42
SPARC-209ENST00000539687 SCXQ7RTU7 201 aa6.2□□□□□ -1.42
SPARC-209ENST00000539687 KRTAP9-2Q9BYQ4 174 aa6.2□□□□□ -1.42
SPARC-209ENST00000539687 SS18L2Q9UHA2 77 aa6.2□□□□□ -1.42
SPARC-209ENST00000539687 A0A087WSZ3 146 aa6.19□□□□□ -1.42
SPARC-209ENST00000539687 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.19□□□□□ -1.42
SPARC-209ENST00000539687 KRTAP10-2P60368 255 aa6.18□□□□□ -1.42
SPARC-209ENST00000539687 CIRBP-AS1Q8TBR5 109 aa6.18□□□□□ -1.42
SPARC-209ENST00000539687 DNAH17Q9UFH2 4485 aa6.18□□□□□ -1.42
SPARC-209ENST00000539687 KRTAP9-6A0A140TA67 174 aa6.16□□□□□ -1.42
SPARC-209ENST00000539687 IGLV9-49A0A0B4J1Y8 123 aa6.15□□□□□ -1.42
SPARC-209ENST00000539687 DSCR10P59022 87 aa6.15□□□□□ -1.42
SPARC-209ENST00000539687 DNAH2Q9P225 4427 aa6.14□□□□□ -1.43
SPARC-209ENST00000539687 CD164Q04900 197 aa6.14□□□□□ -1.43
SPARC-209ENST00000539687 SSBP3-AS1Q7Z2R9 100 aa6.14□□□□□ -1.43
SPARC-209ENST00000539687 HCG22E2RYF7 251 aa6.13□□□□□ -1.43
SPARC-209ENST00000539687 NDUFB1O75438 58 aa6.13□□□□□ -1.43
SPARC-209ENST00000539687 KRTAP10-1P60331 282 aa6.13□□□□□ -1.43
SPARC-209ENST00000539687 KRTAP4-12Q9BQ66 201 aa6.13□□□□□ -1.43
SPARC-209ENST00000539687 A8MWP4 228 aa6.12□□□□□ -1.43
SPARC-209ENST00000539687 NDUFC1O43677 76 aa6.12□□□□□ -1.43
SPARC-209ENST00000539687 MOBPQ13875 183 aa6.12□□□□□ -1.43
SPARC-209ENST00000539687 FAM229BQ4G0N7 80 aa6.12□□□□□ -1.43
SPARC-209ENST00000539687 Q8N9L7 120 aa6.12□□□□□ -1.43
SPARC-209ENST00000539687 LINC00472Q9H8W2 130 aa6.12□□□□□ -1.43
SPARC-209ENST00000539687 FAM30AQ9NZY2 134 aa6.12□□□□□ -1.43
SPARC-209ENST00000539687 K7EQZ3 153 aa6.11□□□□□ -1.43
SPARC-209ENST00000539687 TMEM258P61165 79 aa6.11□□□□□ -1.43
SPARC-209ENST00000539687 RYR1P21817 5038 aa6.11□□□□□ -1.43
SPARC-209ENST00000539687 FRAS1Q86XX4 4008 aa6.1□□□□□ -1.43
SPARC-209ENST00000539687 A0A0G2JQZ4 141 aa6.1□□□□□ -1.43
SPARC-209ENST00000539687 KLKP1Q107X0 134 aa6.1□□□□□ -1.43
SPARC-209ENST00000539687 CDK2AP2O75956 126 aa6.09□□□□□ -1.43
SPARC-209ENST00000539687 PRR15Q8IV56 129 aa6.09□□□□□ -1.43
SPARC-209ENST00000539687 OCR1Q9BZK8 76 aa6.09□□□□□ -1.43
SPARC-209ENST00000539687 KRTAP19-1Q8IUB9 90 aa6.08□□□□□ -1.44
SPARC-209ENST00000539687 C20orf197Q8N268 126 aa6.08□□□□□ -1.44
SPARC-209ENST00000539687 KMT2AQ03164 3969 aa6.07□□□□□ -1.44
SPARC-209ENST00000539687 ASB16-AS1Q495Z4 193 aa6.05□□□□□ -1.44
SPARC-209ENST00000539687 C5orf47Q569G3 176 aa6.05□□□□□ -1.44
SPARC-209ENST00000539687 CASC2Q6XLA1 102 aa6.05□□□□□ -1.44
SPARC-209ENST00000539687 TMEM254Q8TBM7 123 aa6.05□□□□□ -1.44
SPARC-209ENST00000539687 ATP5EP56381 51 aaPredicted RBP6.04□□□□□ -1.44
SPARC-209ENST00000539687 KIAA1109Q2LD37 5005 aa6.04□□□□□ -1.44
SPARC-209ENST00000539687 DEFB116Q30KQ4 102 aa6.03□□□□□ -1.44
SPARC-209ENST00000539687 SPINK6Q6UWN8 80 aa6.03□□□□□ -1.44
SPARC-209ENST00000539687 DNAH8Q96JB1 4490 aa6.03□□□□□ -1.44
SPARC-209ENST00000539687 HECTD4Q9Y4D8 3996 aa6.02□□□□□ -1.45
SPARC-209ENST00000539687 KRTAP29-1A8MX34 341 aaPredicted RBP6.02□□□□□ -1.45
SPARC-209ENST00000539687 H3BPC8 53 aa6.02□□□□□ -1.45
SPARC-209ENST00000539687 Q5XG85 94 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 140.5 ms