RNA–Protein interactions for RNA: ENST00000539631.1

TSPAN9-207, Transcript of tetraspanin 9, humanhuman

TSL 3

Gene TSPAN9, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-207ENST00000539631 SPAG11AQ6PDA7 123 aa7.33□□□□□ -1.24
TSPAN9-207ENST00000539631 SNCGO76070 127 aa7.32□□□□□ -1.24
TSPAN9-207ENST00000539631 A0A1B0GX51 115 aa7.31□□□□□ -1.24
TSPAN9-207ENST00000539631 COX6CP09669 75 aa7.31□□□□□ -1.24
TSPAN9-207ENST00000539631 BATFQ16520 125 aa7.31□□□□□ -1.24
TSPAN9-207ENST00000539631 KRTAP9-6A0A140TA67 174 aa7.3□□□□□ -1.24
TSPAN9-207ENST00000539631 SPINK1P00995 79 aa7.29□□□□□ -1.24
TSPAN9-207ENST00000539631 PPDPFLQ8WWR9 84 aa7.29□□□□□ -1.24
TSPAN9-207ENST00000539631 NAA38Q9BRA0 125 aaKnown RBP7.29□□□□□ -1.24
TSPAN9-207ENST00000539631 SCGB1C2P0DMR2 95 aa7.28□□□□□ -1.24
TSPAN9-207ENST00000539631 OCIAD2Q56VL3 154 aa7.28□□□□□ -1.24
TSPAN9-207ENST00000539631 RETNLBQ9BQ08 111 aa7.28□□□□□ -1.24
TSPAN9-207ENST00000539631 A0A0G2JQZ4 141 aa7.27□□□□□ -1.25
TSPAN9-207ENST00000539631 F8WEM9 126 aa7.27□□□□□ -1.25
TSPAN9-207ENST00000539631 PRR4Q16378 134 aa7.27□□□□□ -1.25
TSPAN9-207ENST00000539631 HRCT1Q6UXD1 115 aa7.27□□□□□ -1.25
TSPAN9-207ENST00000539631 SNHG12Q9BXW3 62 aa7.27□□□□□ -1.25
TSPAN9-207ENST00000539631 KRTAP9-2Q9BYQ4 174 aa7.27□□□□□ -1.25
TSPAN9-207ENST00000539631 DNAL4O96015 105 aa7.26□□□□□ -1.25
TSPAN9-207ENST00000539631 LST1O00453 97 aa7.24□□□□□ -1.25
TSPAN9-207ENST00000539631 RPS29P62273 56 aaKnown RBP7.24□□□□□ -1.25
TSPAN9-207ENST00000539631 IGLV8-61A0A075B6I0 122 aa7.23□□□□□ -1.25
TSPAN9-207ENST00000539631 TRACP01848 142 aa7.23□□□□□ -1.25
TSPAN9-207ENST00000539631 FABP2P12104 132 aa7.23□□□□□ -1.25
TSPAN9-207ENST00000539631 NDUFV3P56181 108 aaKnown RBP7.23□□□□□ -1.25
TSPAN9-207ENST00000539631 ORMDL1Q9P0S3 153 aa7.23□□□□□ -1.25
TSPAN9-207ENST00000539631 LPAP08519 4548 aa7.22□□□□□ -1.25
TSPAN9-207ENST00000539631 GHRHP01286 108 aa7.22□□□□□ -1.25
TSPAN9-207ENST00000539631 CD164Q04900 197 aa7.22□□□□□ -1.25
TSPAN9-207ENST00000539631 IGFL1Q6UW32 110 aa7.22□□□□□ -1.25
TSPAN9-207ENST00000539631 RNF213Q63HN8 5207 aa7.21□□□□□ -1.26
TSPAN9-207ENST00000539631 H3BUT2 72 aa7.21□□□□□ -1.26
TSPAN9-207ENST00000539631 TAX1BP3O14907 124 aa7.21□□□□□ -1.26
TSPAN9-207ENST00000539631 TCL1BO95988 128 aa7.21□□□□□ -1.26
TSPAN9-207ENST00000539631 Q6JHZ5 121 aa7.21□□□□□ -1.26
TSPAN9-207ENST00000539631 C9orf118A6NHY6 69 aa7.19□□□□□ -1.26
TSPAN9-207ENST00000539631 H3BQ85 93 aa7.19□□□□□ -1.26
TSPAN9-207ENST00000539631 ATXN8Q156A1 80 aa7.19□□□□□ -1.26
TSPAN9-207ENST00000539631 LIMD2Q9BT23 127 aa7.19□□□□□ -1.26
TSPAN9-207ENST00000539631 PCP4L1A6NKN8 68 aa7.18□□□□□ -1.26
TSPAN9-207ENST00000539631 H3BMG7 143 aa7.18□□□□□ -1.26
TSPAN9-207ENST00000539631 TMEM256-PLSCR3K7ERE1 68 aa7.18□□□□□ -1.26
TSPAN9-207ENST00000539631 IGLV7-46A0A075B6I9 117 aa7.17□□□□□ -1.26
TSPAN9-207ENST00000539631 LYRM7Q5U5X0 104 aa7.17□□□□□ -1.26
TSPAN9-207ENST00000539631 LRP2P98164 4655 aa7.16□□□□□ -1.26
TSPAN9-207ENST00000539631 A0A1B0GV72 72 aa7.16□□□□□ -1.26
TSPAN9-207ENST00000539631 FP248Q71RG6 208 aaPredicted RBP7.16□□□□□ -1.26
TSPAN9-207ENST00000539631 UBE2V1Q13404 147 aa7.15□□□□□ -1.26
TSPAN9-207ENST00000539631 TRBV7-7A0A0K0K1E9 115 aa7.14□□□□□ -1.27
TSPAN9-207ENST00000539631 A0A1W2PPM0 123 aa7.14□□□□□ -1.27
TSPAN9-207ENST00000539631 BAALC-AS2P0C853 105 aa7.14□□□□□ -1.27
TSPAN9-207ENST00000539631 Q5XG85 94 aa7.14□□□□□ -1.27
TSPAN9-207ENST00000539631 TRBV20-1A0A075B6N2 111 aa7.13□□□□□ -1.27
TSPAN9-207ENST00000539631 COL5A1-AS1Q5SY13 56 aa7.13□□□□□ -1.27
TSPAN9-207ENST00000539631 ANKRD29Q8N6D5 301 aa7.12□□□□□ -1.27
TSPAN9-207ENST00000539631 TPRXLQ17RH7 258 aa7.11□□□□□ -1.27
TSPAN9-207ENST00000539631 TEN1Q86WV5 123 aa7.11□□□□□ -1.27
TSPAN9-207ENST00000539631 C9JAW5 83 aa7.1□□□□□ -1.27
TSPAN9-207ENST00000539631 C1orf195Q5TG92 126 aa7.1□□□□□ -1.27
TSPAN9-207ENST00000539631 Q6Q795 121 aa7.1□□□□□ -1.27
TSPAN9-207ENST00000539631 A0A1W2PNM2 257 aa7.09□□□□□ -1.27
TSPAN9-207ENST00000539631 KRTAP13-3Q3SY46 172 aa7.08□□□□□ -1.28
TSPAN9-207ENST00000539631 RBM3P98179 157 aaKnown RBP7.07□□□□□ -1.28
TSPAN9-207ENST00000539631 ASB16-AS1Q495Z4 193 aa7.07□□□□□ -1.28
TSPAN9-207ENST00000539631 A0A087WSZ3 146 aa7.06□□□□□ -1.28
TSPAN9-207ENST00000539631 TRBV7-4A0A0J9YYF1 115 aa7.06□□□□□ -1.28
TSPAN9-207ENST00000539631 MTURNQ8N3F0 131 aa7.06□□□□□ -1.28
TSPAN9-207ENST00000539631 CDIP1Q9H305 208 aa7.06□□□□□ -1.28
TSPAN9-207ENST00000539631 SPCS1Q9Y6A9 102 aa7.06□□□□□ -1.28
TSPAN9-207ENST00000539631 DSCR8Q96T75 97 aa7.05□□□□□ -1.28
TSPAN9-207ENST00000539631 CCKP06307 115 aa7.04□□□□□ -1.28
TSPAN9-207ENST00000539631 JMJD7-PLA2G4BH0Y9G9 81 aa7.03□□□□□ -1.28
TSPAN9-207ENST00000539631 SS18L2Q9UHA2 77 aa7.03□□□□□ -1.28
TSPAN9-207ENST00000539631 H3BT86 120 aa7.02□□□□□ -1.29
TSPAN9-207ENST00000539631 VPS25Q9BRG1 176 aa7.02□□□□□ -1.29
TSPAN9-207ENST00000539631 MUC17Q685J3 4493 aa7.01□□□□□ -1.29
TSPAN9-207ENST00000539631 C9orf92A6NGG3 77 aa7□□□□□ -1.29
TSPAN9-207ENST00000539631 K7EP34 96 aa7□□□□□ -1.29
TSPAN9-207ENST00000539631 OBSCN-AS1Q96MR7 158 aa7□□□□□ -1.29
TSPAN9-207ENST00000539631 Q6ZQT0 140 aa6.99□□□□□ -1.29
TSPAN9-207ENST00000539631 Q96NJ1 140 aa6.99□□□□□ -1.29
TSPAN9-207ENST00000539631 C14orf132Q9NPU4 83 aa6.99□□□□□ -1.29
TSPAN9-207ENST00000539631 LOC110117498A0A087WWA1 95 aa6.98□□□□□ -1.29
TSPAN9-207ENST00000539631 SMCPP49901 116 aaPredicted RBP6.98□□□□□ -1.29
TSPAN9-207ENST00000539631 XP32Q5T750 250 aa6.97□□□□□ -1.29
TSPAN9-207ENST00000539631 PDE6GP18545 87 aa6.95□□□□□ -1.3
TSPAN9-207ENST00000539631 PRO0461Q9UI25 63 aa6.95□□□□□ -1.3
TSPAN9-207ENST00000539631 GTF2H5Q6ZYL4 71 aa6.94□□□□□ -1.3
TSPAN9-207ENST00000539631 DEFB116Q30KQ4 102 aa6.93□□□□□ -1.3
TSPAN9-207ENST00000539631 LINC00472Q9H8W2 130 aa6.93□□□□□ -1.3
TSPAN9-207ENST00000539631 IGKV4-1P06312 121 aa6.92□□□□□ -1.3
TSPAN9-207ENST00000539631 C21orf62-AS1Q17RA5 79 aa6.91□□□□□ -1.3
TSPAN9-207ENST00000539631 SIGMAR1Q99720 223 aa6.91□□□□□ -1.3
TSPAN9-207ENST00000539631 A0A1B0GW54 56 aa6.9□□□□□ -1.3
TSPAN9-207ENST00000539631 SEC61BP60468 96 aaKnown RBP6.88□□□□□ -1.31
TSPAN9-207ENST00000539631 FAT4Q6V0I7 4981 aa6.88□□□□□ -1.31
TSPAN9-207ENST00000539631 F8W1H4 67 aa6.86□□□□□ -1.31
TSPAN9-207ENST00000539631 DSCR10P59022 87 aa6.85□□□□□ -1.31
TSPAN9-207ENST00000539631 MUC2Q02817 5179 aa6.84□□□□□ -1.31
TSPAN9-207ENST00000539631 A0A0U1RQV1 116 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms