RNA–Protein interactions for RNA: ENST00000539303.5

SNHG1-210, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 240 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-210ENST00000539303 TRANK1O15050 2925 aa0.23□□□□□ -2.37
SNHG1-210ENST00000539303 BSNQ9UPA5 3926 aa0.22□□□□□ -2.37
SNHG1-210ENST00000539303 CACNA1AO00555 2505 aa0.22□□□□□ -2.37
SNHG1-210ENST00000539303 MAP1BP46821 2468 aaKnown RBP0.22□□□□□ -2.37
SNHG1-210ENST00000539303 REV3LO60673 3130 aa0.22□□□□□ -2.37
SNHG1-210ENST00000539303 IAPPP10997 89 aa0.22□□□□□ -2.37
SNHG1-210ENST00000539303 S100ZQ8WXG8 99 aa0.22□□□□□ -2.37
SNHG1-210ENST00000539303 DMBT1Q9UGM3 2413 aaPredicted RBP0.22□□□□□ -2.37
SNHG1-210ENST00000539303 DEFB114Q30KQ6 69 aa0.21□□□□□ -2.38
SNHG1-210ENST00000539303 SETXQ7Z333 2677 aaKnown RBP0.21□□□□□ -2.38
SNHG1-210ENST00000539303 ERICH3Q5RHP9 1530 aa0.21□□□□□ -2.38
SNHG1-210ENST00000539303 C3P01024 1663 aa0.21□□□□□ -2.38
SNHG1-210ENST00000539303 APC2O95996 2303 aa0.2□□□□□ -2.38
SNHG1-210ENST00000539303 HUWE1Q7Z6Z7 4374 aaKnown RBP0.2□□□□□ -2.38
SNHG1-210ENST00000539303 MDN1Q9NU22 5596 aa0.2□□□□□ -2.38
SNHG1-210ENST00000539303 KMT2AQ03164 3969 aa0.2□□□□□ -2.38
SNHG1-210ENST00000539303 FAT2Q9NYQ8 4349 aa0.19□□□□□ -2.38
SNHG1-210ENST00000539303 MYCBP2O75592 4640 aa0.19□□□□□ -2.38
SNHG1-210ENST00000539303 ABCC6O95255 1503 aa0.19□□□□□ -2.38
SNHG1-210ENST00000539303 KIAA0586Q9BVV6 1533 aa0.19□□□□□ -2.38
SNHG1-210ENST00000539303 COL7A1Q02388 2944 aa0.19□□□□□ -2.38
SNHG1-210ENST00000539303 SYNE2Q8WXH0 6885 aaKnown RBP0.19□□□□□ -2.38
SNHG1-210ENST00000539303 ABCA6Q8N139 1617 aa0.19□□□□□ -2.38
SNHG1-210ENST00000539303 DCHS2Q6V1P9 2916 aa0.19□□□□□ -2.38
SNHG1-210ENST00000539303 MACF1Q9UPN3 7388 aaKnown RBP0.18□□□□□ -2.38
SNHG1-210ENST00000539303 KMT2DO14686 5537 aa0.18□□□□□ -2.38
SNHG1-210ENST00000539303 PRKDCP78527 4128 aaKnown RBP0.18□□□□□ -2.38
SNHG1-210ENST00000539303 ACANP16112 2415 aa0.17□□□□□ -2.38
SNHG1-210ENST00000539303 FSIP2Q5CZC0 6907 aa0.17□□□□□ -2.38
SNHG1-210ENST00000539303 SFTA3P0C7M3 94 aa0.17□□□□□ -2.38
SNHG1-210ENST00000539303 MINOS1Q5TGZ0 78 aa0.17□□□□□ -2.38
SNHG1-210ENST00000539303 NCBP2-AS2Q69YL0 99 aa0.17□□□□□ -2.38
SNHG1-210ENST00000539303 SMIM5Q71RC9 77 aa0.17□□□□□ -2.38
SNHG1-210ENST00000539303 AKAP13Q12802 2813 aa0.17□□□□□ -2.38
SNHG1-210ENST00000539303 FLNBO75369 2602 aaKnown RBP0.17□□□□□ -2.38
SNHG1-210ENST00000539303 BPTFQ12830 3046 aa0.16□□□□□ -2.38
SNHG1-210ENST00000539303 DSPP15924 2871 aaKnown RBP0.16□□□□□ -2.38
SNHG1-210ENST00000539303 FCER1GP30273 86 aa0.16□□□□□ -2.38
SNHG1-210ENST00000539303 FLNCQ14315 2725 aa0.15□□□□□ -2.38
SNHG1-210ENST00000539303 HMCN2Q8NDA2 5059 aa0.15□□□□□ -2.39
SNHG1-210ENST00000539303 K7EMI3 77 aa0.15□□□□□ -2.39
SNHG1-210ENST00000539303 SPRR2BP35325 72 aa0.15□□□□□ -2.39
SNHG1-210ENST00000539303 PCNX1Q96RV3 2341 aa0.15□□□□□ -2.39
SNHG1-210ENST00000539303 NSD1Q96L73 2696 aaPredicted RBP0.15□□□□□ -2.39
SNHG1-210ENST00000539303 ANKRD36CQ5JPF3 1778 aa0.14□□□□□ -2.39
SNHG1-210ENST00000539303 M0R1W7 72 aa0.14□□□□□ -2.39
SNHG1-210ENST00000539303 SPRR2GQ9BYE4 73 aa0.14□□□□□ -2.39
SNHG1-210ENST00000539303 NBASA2RRP1 2371 aa0.13□□□□□ -2.39
SNHG1-210ENST00000539303 NMES1Q9C002 83 aa0.13□□□□□ -2.39
SNHG1-210ENST00000539303 GLI2P10070 1586 aa0.13□□□□□ -2.39
SNHG1-210ENST00000539303 TIAM1Q13009 1591 aa0.13□□□□□ -2.39
SNHG1-210ENST00000539303 FLNAP21333 2647 aaKnown RBP0.13□□□□□ -2.39
SNHG1-210ENST00000539303 LY75O60449 1722 aa0.13□□□□□ -2.39
SNHG1-210ENST00000539303 ITSN2Q9NZM3 1697 aa0.12□□□□□ -2.39
SNHG1-210ENST00000539303 TNRC18O15417 2968 aaPredicted RBP0.12□□□□□ -2.39
SNHG1-210ENST00000539303 PRLHP81277 87 aa0.12□□□□□ -2.39
SNHG1-210ENST00000539303 SERF2P84101 59 aa0.12□□□□□ -2.39
SNHG1-210ENST00000539303 DEFB106AQ8N104 65 aa0.12□□□□□ -2.39
SNHG1-210ENST00000539303 C6orf48Q9UBA6 75 aa0.12□□□□□ -2.39
SNHG1-210ENST00000539303 ABCA10Q8WWZ4 1543 aa0.12□□□□□ -2.39
SNHG1-210ENST00000539303 HECTD1Q9ULT8 2610 aa0.12□□□□□ -2.39
SNHG1-210ENST00000539303 LPAP08519 4548 aa0.12□□□□□ -2.39
SNHG1-210ENST00000539303 PRRC2CQ9Y520 2896 aaKnown RBP0.12□□□□□ -2.39
SNHG1-210ENST00000539303 KIF1AQ12756 1690 aa0.11□□□□□ -2.39
SNHG1-210ENST00000539303 ALS2Q96Q42 1657 aa0.11□□□□□ -2.39
SNHG1-210ENST00000539303 RPS27P42677 84 aaKnown RBP0.11□□□□□ -2.39
SNHG1-210ENST00000539303 WT1-ASQ06250 92 aa0.11□□□□□ -2.39
SNHG1-210ENST00000539303 RPS27LQ71UM5 84 aaKnown RBP0.11□□□□□ -2.39
SNHG1-210ENST00000539303 S4R3F8 94 aa0.1□□□□□ -2.39
SNHG1-210ENST00000539303 CROCC2H7BZ55 1655 aa0.1□□□□□ -2.39
SNHG1-210ENST00000539303 CPS1P31327 1500 aa0.09□□□□□ -2.39
SNHG1-210ENST00000539303 UGGT1Q9NYU2 1555 aa0.09□□□□□ -2.4
SNHG1-210ENST00000539303 PRXQ9BXM0 1461 aa0.09□□□□□ -2.4
SNHG1-210ENST00000539303 HSPG2P98160 4391 aa0.08□□□□□ -2.4
SNHG1-210ENST00000539303 H3BNG1 76 aa0.08□□□□□ -2.4
SNHG1-210ENST00000539303 ALMS1Q8TCU4 4167 aa0.07□□□□□ -2.4
SNHG1-210ENST00000539303 ZANQ9Y493 2812 aa0.07□□□□□ -2.4
SNHG1-210ENST00000539303 EEA1Q15075 1411 aa0.07□□□□□ -2.4
SNHG1-210ENST00000539303 TENM2Q9NT68 2774 aa0.07□□□□□ -2.4
SNHG1-210ENST00000539303 CREBBPQ92793 2442 aa0.07□□□□□ -2.4
SNHG1-210ENST00000539303 CDC42BPAQ5VT25 1732 aa0.07□□□□□ -2.4
SNHG1-210ENST00000539303 SPTBN4Q9H254 2564 aa0.06□□□□□ -2.4
SNHG1-210ENST00000539303 CLASP1Q7Z460 1538 aa0.06□□□□□ -2.4
SNHG1-210ENST00000539303 LYSTQ99698 3801 aa0.06□□□□□ -2.4
SNHG1-210ENST00000539303 TOGARAM1Q9Y4F4 1720 aa0.05□□□□□ -2.4
SNHG1-210ENST00000539303 C9orf92A6NGG3 77 aa0.05□□□□□ -2.4
SNHG1-210ENST00000539303 IGIPA6NJ69 53 aa0.05□□□□□ -2.4
SNHG1-210ENST00000539303 H3BUA1 57 aa0.05□□□□□ -2.4
SNHG1-210ENST00000539303 TIMM8BQ9Y5J9 83 aaPredicted RBP0.05□□□□□ -2.4
SNHG1-210ENST00000539303 MAP1AP78559 2803 aaPredicted RBP0.05□□□□□ -2.4
SNHG1-210ENST00000539303 NF1P21359 2839 aa0.05□□□□□ -2.4
SNHG1-210ENST00000539303 TMEM167BQ9NRX6 74 aa0.04□□□□□ -2.4
SNHG1-210ENST00000539303 HECTD4Q9Y4D8 3996 aa0.04□□□□□ -2.4
SNHG1-210ENST00000539303 COL6A3P12111 3177 aa0.03□□□□□ -2.4
SNHG1-210ENST00000539303 CEP290O15078 2479 aa0.03□□□□□ -2.4
SNHG1-210ENST00000539303 KRTAP6-2Q3LI66 62 aa0.03□□□□□ -2.4
SNHG1-210ENST00000539303 SETD2Q9BYW2 2564 aaPredicted RBP0.02□□□□□ -2.41
SNHG1-210ENST00000539303 SPRR2AP35326 72 aa0.02□□□□□ -2.41
SNHG1-210ENST00000539303 LINC00308Q8TCZ7 52 aa0.02□□□□□ -2.41
SNHG1-210ENST00000539303 PKD1L2Q7Z442 2459 aa0.02□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms