RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 KRTAP10-3P60369 221 aa3.35□□□□□ -1.87
PTPRD-213ENST00000537002 CRIPTQ9P021 101 aa3.35□□□□□ -1.87
PTPRD-213ENST00000537002 FRYQ5TBA9 3013 aa3.34□□□□□ -1.88
PTPRD-213ENST00000537002 A0A0D9SG42 100 aa3.33□□□□□ -1.88
PTPRD-213ENST00000537002 NBDYA0A0U1RRE5 68 aa3.33□□□□□ -1.88
PTPRD-213ENST00000537002 ZZEF1O43149 2961 aa3.33□□□□□ -1.88
PTPRD-213ENST00000537002 TRIOO75962 3097 aa3.33□□□□□ -1.88
PTPRD-213ENST00000537002 GCN1Q92616 2671 aaKnown RBP3.33□□□□□ -1.88
PTPRD-213ENST00000537002 ITPR1Q14643 2758 aa3.32□□□□□ -1.88
PTPRD-213ENST00000537002 CHD6Q8TD26 2715 aa3.32□□□□□ -1.88
PTPRD-213ENST00000537002 DMAC1Q96GE9 116 aa3.32□□□□□ -1.88
PTPRD-213ENST00000537002 MKI67P46013 3256 aaKnown RBP3.32□□□□□ -1.88
PTPRD-213ENST00000537002 NOTCH2NLQ7Z3S9 236 aa3.32□□□□□ -1.88
PTPRD-213ENST00000537002 KRTAP10-11P60412 298 aa3.32□□□□□ -1.88
PTPRD-213ENST00000537002 BRCA2P51587 3418 aa3.31□□□□□ -1.88
PTPRD-213ENST00000537002 VPS13AQ96RL7 3174 aa3.31□□□□□ -1.88
PTPRD-213ENST00000537002 ADM2Q7Z4H4 148 aa3.31□□□□□ -1.88
PTPRD-213ENST00000537002 TACC2O95359 2948 aa3.31□□□□□ -1.88
PTPRD-213ENST00000537002 TYMSOSQ8TAI1 123 aa3.3□□□□□ -1.88
PTPRD-213ENST00000537002 ZNF861PO60384 105 aa3.3□□□□□ -1.88
PTPRD-213ENST00000537002 C9orf92A6NGG3 77 aa3.3□□□□□ -1.88
PTPRD-213ENST00000537002 LAMA1P25391 3075 aa3.29□□□□□ -1.88
PTPRD-213ENST00000537002 HELZ2Q9BYK8 2649 aaKnown RBP3.29□□□□□ -1.88
PTPRD-213ENST00000537002 HRNRQ86YZ3 2850 aaPredicted RBP3.29□□□□□ -1.88
PTPRD-213ENST00000537002 POLQO75417 2590 aa3.29□□□□□ -1.88
PTPRD-213ENST00000537002 BAHCC1Q9P281 2608 aa3.28□□□□□ -1.88
PTPRD-213ENST00000537002 PSORS1C2Q9UIG4 136 aa3.28□□□□□ -1.88
PTPRD-213ENST00000537002 SETXQ7Z333 2677 aaKnown RBP3.28□□□□□ -1.88
PTPRD-213ENST00000537002 A0A1B0GU33 70 aa3.28□□□□□ -1.88
PTPRD-213ENST00000537002 UNC79Q9P2D8 2635 aa3.27□□□□□ -1.89
PTPRD-213ENST00000537002 DNAH14Q0VDD8 3507 aa3.27□□□□□ -1.89
PTPRD-213ENST00000537002 Q5W150 140 aa3.27□□□□□ -1.89
PTPRD-213ENST00000537002 AKAP13Q12802 2813 aa3.26□□□□□ -1.89
PTPRD-213ENST00000537002 IGLV7-43P04211 117 aa3.26□□□□□ -1.89
PTPRD-213ENST00000537002 XIRP2A4UGR9 3374 aa3.25□□□□□ -1.89
PTPRD-213ENST00000537002 UTP20O75691 2785 aaKnown RBP3.25□□□□□ -1.89
PTPRD-213ENST00000537002 KALRNO60229 2985 aa3.24□□□□□ -1.89
PTPRD-213ENST00000537002 UNC80Q8N2C7 3258 aa3.24□□□□□ -1.89
PTPRD-213ENST00000537002 LINC00483Q53H64 154 aa3.24□□□□□ -1.89
PTPRD-213ENST00000537002 MGAQ8IWI9 3026 aa3.23□□□□□ -1.89
PTPRD-213ENST00000537002 FLNAP21333 2647 aaKnown RBP3.23□□□□□ -1.89
PTPRD-213ENST00000537002 APCP25054 2843 aa3.23□□□□□ -1.89
PTPRD-213ENST00000537002 VCANP13611 3396 aa3.23□□□□□ -1.89
PTPRD-213ENST00000537002 A0A087WTM6 91 aa3.23□□□□□ -1.89
PTPRD-213ENST00000537002 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.23□□□□□ -1.89
PTPRD-213ENST00000537002 FRYLO94915 3013 aa3.23□□□□□ -1.89
PTPRD-213ENST00000537002 ACANP16112 2415 aa3.23□□□□□ -1.89
PTPRD-213ENST00000537002 LINC00304Q8N9R0 145 aa3.22□□□□□ -1.89
PTPRD-213ENST00000537002 ADGRG4Q8IZF6 3080 aa3.21□□□□□ -1.9
PTPRD-213ENST00000537002 ITPR3Q14573 2671 aa3.21□□□□□ -1.9
PTPRD-213ENST00000537002 ROMO1P60602 79 aa3.21□□□□□ -1.9
PTPRD-213ENST00000537002 FREM2Q5SZK8 3169 aa3.2□□□□□ -1.9
PTPRD-213ENST00000537002 LAMA3Q16787 3333 aa3.2□□□□□ -1.9
PTPRD-213ENST00000537002 REV3LO60673 3130 aa3.2□□□□□ -1.9
PTPRD-213ENST00000537002 KRTAP25-1Q3LHN0 102 aa3.19□□□□□ -1.9
PTPRD-213ENST00000537002 CENPEQ02224 2701 aa3.19□□□□□ -1.9
PTPRD-213ENST00000537002 KRTAP7-1Q8IUC3 87 aa3.18□□□□□ -1.9
PTPRD-213ENST00000537002 CDH23Q9H251 3354 aa3.18□□□□□ -1.9
PTPRD-213ENST00000537002 KRTAP13-1Q8IUC0 172 aa3.17□□□□□ -1.9
PTPRD-213ENST00000537002 LRBAP50851 2863 aa3.17□□□□□ -1.9
PTPRD-213ENST00000537002 TEX15Q9BXT5 2789 aa3.17□□□□□ -1.9
PTPRD-213ENST00000537002 H1FX-AS1Q4G0G2 97 aa3.17□□□□□ -1.9
PTPRD-213ENST00000537002 KRTAP13-3Q3SY46 172 aa3.17□□□□□ -1.9
PTPRD-213ENST00000537002 LUZP6Q538Z0 58 aa3.17□□□□□ -1.9
PTPRD-213ENST00000537002 NBEAL2Q6ZNJ1 2754 aa3.17□□□□□ -1.9
PTPRD-213ENST00000537002 CFAP46Q8IYW2 2715 aa3.17□□□□□ -1.9
PTPRD-213ENST00000537002 FLNCQ14315 2725 aa3.16□□□□□ -1.9
PTPRD-213ENST00000537002 KMT2BQ9UMN6 2715 aaPredicted RBP3.16□□□□□ -1.9
PTPRD-213ENST00000537002 IGSF10Q6WRI0 2623 aa3.16□□□□□ -1.9
PTPRD-213ENST00000537002 MXRA5Q9NR99 2828 aa3.15□□□□□ -1.9
PTPRD-213ENST00000537002 ZFHX3Q15911 3703 aa3.15□□□□□ -1.9
PTPRD-213ENST00000537002 COX6B2Q6YFQ2 88 aa3.15□□□□□ -1.91
PTPRD-213ENST00000537002 KRTAP1-5Q9BYS1 174 aa3.15□□□□□ -1.91
PTPRD-213ENST00000537002 PRUNE2Q8WUY3 3088 aa3.15□□□□□ -1.91
PTPRD-213ENST00000537002 KRTAP16-1A8MUX0 517 aa3.14□□□□□ -1.91
PTPRD-213ENST00000537002 NIPBLQ6KC79 2804 aaeCLIP3.14□□□□□ -1.91
PTPRD-213ENST00000537002 A0A0A0MQY5 61 aa3.14□□□□□ -1.91
PTPRD-213ENST00000537002 SMR3BP02814 79 aaPredicted RBP3.14□□□□□ -1.91
PTPRD-213ENST00000537002 A8MUU9 505 aa3.13□□□□□ -1.91
PTPRD-213ENST00000537002 RPL37P61927 97 aaKnown RBP3.13□□□□□ -1.91
PTPRD-213ENST00000537002 WDFY4Q6ZS81 3184 aa3.13□□□□□ -1.91
PTPRD-213ENST00000537002 KRTAP11-1Q8IUC1 163 aa3.13□□□□□ -1.91
PTPRD-213ENST00000537002 NDUFAF8A1L188 74 aa3.13□□□□□ -1.91
PTPRD-213ENST00000537002 SPTBN5Q9NRC6 3674 aaKnown RBP3.13□□□□□ -1.91
PTPRD-213ENST00000537002 DMXL2Q8TDJ6 3036 aa3.13□□□□□ -1.91
PTPRD-213ENST00000537002 PANO1I0J062 215 aa3.13□□□□□ -1.91
PTPRD-213ENST00000537002 MAST4O15021 2626 aa3.12□□□□□ -1.91
PTPRD-213ENST00000537002 SZT2Q5T011 3432 aa3.12□□□□□ -1.91
PTPRD-213ENST00000537002 ATRQ13535 2644 aa3.12□□□□□ -1.91
PTPRD-213ENST00000537002 ZANQ9Y493 2812 aa3.12□□□□□ -1.91
PTPRD-213ENST00000537002 TEP1Q99973 2627 aaKnown RBP3.11□□□□□ -1.91
PTPRD-213ENST00000537002 DCHS2Q6V1P9 2916 aa3.1□□□□□ -1.91
PTPRD-213ENST00000537002 S4R3F8 94 aa3.09□□□□□ -1.91
PTPRD-213ENST00000537002 STAB1Q9NY15 2570 aa3.08□□□□□ -1.92
PTPRD-213ENST00000537002 BOD1L1Q8NFC6 3051 aa3.08□□□□□ -1.92
PTPRD-213ENST00000537002 MGAM2Q2M2H8 2515 aa3.07□□□□□ -1.92
PTPRD-213ENST00000537002 ASH1LQ9NR48 2969 aaKnown RBP3.07□□□□□ -1.92
PTPRD-213ENST00000537002 USP34Q70CQ2 3546 aa3.06□□□□□ -1.92
PTPRD-213ENST00000537002 NF1P21359 2839 aa3.06□□□□□ -1.92
PTPRD-213ENST00000537002 CAMK2N1Q7Z7J9 78 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms