RNA–Protein interactions for RNA: ENST00000536625.1

KNTC1-209, Transcript of kinetochore associated 1, humanhuman

TSL 2

Gene KNTC1, Length 1,178 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-209ENST00000536625 A0A1B0GU33 70 aa2.53□□□□□ -2
KNTC1-209ENST00000536625 H1FX-AS1Q4G0G2 97 aa2.53□□□□□ -2
KNTC1-209ENST00000536625 C10orf99Q6UWK7 81 aa2.53□□□□□ -2
KNTC1-209ENST00000536625 CFAP47Q6ZTR5 3102 aa2.52□□□□□ -2.01
KNTC1-209ENST00000536625 USP34Q70CQ2 3546 aa2.52□□□□□ -2.01
KNTC1-209ENST00000536625 LELP1Q5T871 98 aa2.52□□□□□ -2.01
KNTC1-209ENST00000536625 DNAH12Q6ZR08 3092 aa2.51□□□□□ -2.01
KNTC1-209ENST00000536625 DEFB130BP0DP73 79 aa2.51□□□□□ -2.01
KNTC1-209ENST00000536625 DEFB130AP0DP74 79 aa2.51□□□□□ -2.01
KNTC1-209ENST00000536625 LCE3DQ9BYE3 92 aa2.51□□□□□ -2.01
KNTC1-209ENST00000536625 SPTBN2O15020 2390 aa2.51□□□□□ -2.01
KNTC1-209ENST00000536625 UNC80Q8N2C7 3258 aa2.5□□□□□ -2.01
KNTC1-209ENST00000536625 KRTAP5-7Q6L8G8 165 aa2.5□□□□□ -2.01
KNTC1-209ENST00000536625 C10orf95Q9H7T3 257 aa2.5□□□□□ -2.01
KNTC1-209ENST00000536625 COL6A6A6NMZ7 2263 aa2.49□□□□□ -2.01
KNTC1-209ENST00000536625 PKDREJQ9NTG1 2253 aa2.49□□□□□ -2.01
KNTC1-209ENST00000536625 PP632Q6XCG6 107 aa2.49□□□□□ -2.01
KNTC1-209ENST00000536625 MKI67P46013 3256 aaKnown RBP2.49□□□□□ -2.01
KNTC1-209ENST00000536625 TRIOBPQ9H2D6 2365 aa2.49□□□□□ -2.01
KNTC1-209ENST00000536625 CEP250Q9BV73 2442 aa2.48□□□□□ -2.01
KNTC1-209ENST00000536625 C4orf3Q8WVX3 66 aa2.48□□□□□ -2.01
KNTC1-209ENST00000536625 PRLHP81277 87 aa2.46□□□□□ -2.02
KNTC1-209ENST00000536625 GPR179Q6PRD1 2367 aa2.46□□□□□ -2.02
KNTC1-209ENST00000536625 NBEAQ8NFP9 2946 aa2.46□□□□□ -2.02
KNTC1-209ENST00000536625 VPS13AQ96RL7 3174 aa2.46□□□□□ -2.02
KNTC1-209ENST00000536625 DNAH14Q0VDD8 3507 aa2.45□□□□□ -2.02
KNTC1-209ENST00000536625 SPINK1P00995 79 aa2.45□□□□□ -2.02
KNTC1-209ENST00000536625 PRO2289Q9P1D8 64 aa2.45□□□□□ -2.02
KNTC1-209ENST00000536625 ANKRD17O75179 2603 aaKnown RBP2.45□□□□□ -2.02
KNTC1-209ENST00000536625 RANBP2P49792 3224 aaKnown RBP2.45□□□□□ -2.02
KNTC1-209ENST00000536625 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.45□□□□□ -2.02
KNTC1-209ENST00000536625 PCNX1Q96RV3 2341 aa2.45□□□□□ -2.02
KNTC1-209ENST00000536625 BAHCC1Q9P281 2608 aa2.44□□□□□ -2.02
KNTC1-209ENST00000536625 CNOT1A5YKK6 2376 aaKnown RBP2.44□□□□□ -2.02
KNTC1-209ENST00000536625 PRUNE2Q8WUY3 3088 aa2.44□□□□□ -2.02
KNTC1-209ENST00000536625 WDFY4Q6ZS81 3184 aa2.44□□□□□ -2.02
KNTC1-209ENST00000536625 FRYLO94915 3013 aa2.44□□□□□ -2.02
KNTC1-209ENST00000536625 PTPRZ1P23471 2315 aaPredicted RBP2.44□□□□□ -2.02
KNTC1-209ENST00000536625 A0A096LNI7 61 aa2.43□□□□□ -2.02
KNTC1-209ENST00000536625 RPL37P61927 97 aaKnown RBP2.43□□□□□ -2.02
KNTC1-209ENST00000536625 APC2O95996 2303 aa2.43□□□□□ -2.02
KNTC1-209ENST00000536625 COX6B2Q6YFQ2 88 aa2.42□□□□□ -2.02
KNTC1-209ENST00000536625 PLAC4Q8WY50 150 aa2.42□□□□□ -2.02
KNTC1-209ENST00000536625 FAM186AA6NE01 2351 aa2.42□□□□□ -2.02
KNTC1-209ENST00000536625 DMDP11532 3685 aa2.41□□□□□ -2.02
KNTC1-209ENST00000536625 XIRP2A4UGR9 3374 aa2.41□□□□□ -2.02
KNTC1-209ENST00000536625 TENM2Q9NT68 2774 aa2.41□□□□□ -2.02
KNTC1-209ENST00000536625 IGF2RP11717 2491 aa2.41□□□□□ -2.02
KNTC1-209ENST00000536625 DEFB123Q8N688 67 aa2.41□□□□□ -2.02
KNTC1-209ENST00000536625 DCHS1Q96JQ0 3298 aa2.41□□□□□ -2.02
KNTC1-209ENST00000536625 CACNA1EQ15878 2313 aa2.4□□□□□ -2.02
KNTC1-209ENST00000536625 CHD8Q9HCK8 2581 aa2.4□□□□□ -2.02
KNTC1-209ENST00000536625 FLG2Q5D862 2391 aaPredicted RBP2.39□□□□□ -2.03
KNTC1-209ENST00000536625 ZDBF2Q9HCK1 2354 aa2.39□□□□□ -2.03
KNTC1-209ENST00000536625 KALRNO60229 2985 aa2.39□□□□□ -2.03
KNTC1-209ENST00000536625 CHD6Q8TD26 2715 aa2.39□□□□□ -2.03
KNTC1-209ENST00000536625 SPACA4Q8TDM5 124 aa2.39□□□□□ -2.03
KNTC1-209ENST00000536625 ZFHX4Q86UP3 3567 aa2.39□□□□□ -2.03
KNTC1-209ENST00000536625 CACNA1BQ00975 2339 aa2.39□□□□□ -2.03
KNTC1-209ENST00000536625 HTN3P15516 51 aa2.38□□□□□ -2.03
KNTC1-209ENST00000536625 ACACAQ13085 2346 aa2.38□□□□□ -2.03
KNTC1-209ENST00000536625 AKAP9Q99996 3911 aa2.37□□□□□ -2.03
KNTC1-209ENST00000536625 PIEZO1Q92508 2521 aa2.37□□□□□ -2.03
KNTC1-209ENST00000536625 FRYQ5TBA9 3013 aa2.37□□□□□ -2.03
KNTC1-209ENST00000536625 TRIOO75962 3097 aa2.37□□□□□ -2.03
KNTC1-209ENST00000536625 OTOGQ6ZRI0 2925 aa2.37□□□□□ -2.03
KNTC1-209ENST00000536625 VCANP13611 3396 aa2.36□□□□□ -2.03
KNTC1-209ENST00000536625 SPINK6Q6UWN8 80 aa2.36□□□□□ -2.03
KNTC1-209ENST00000536625 AKAP6Q13023 2319 aa2.36□□□□□ -2.03
KNTC1-209ENST00000536625 SPENQ96T58 3664 aaKnown RBP2.36□□□□□ -2.03
KNTC1-209ENST00000536625 LAMA2P24043 3122 aaKnown RBP2.35□□□□□ -2.03
KNTC1-209ENST00000536625 R4GN34 69 aa2.35□□□□□ -2.03
KNTC1-209ENST00000536625 VPS13DQ5THJ4 4388 aa2.34□□□□□ -2.03
KNTC1-209ENST00000536625 DEFB4AO15263 64 aa2.34□□□□□ -2.03
KNTC1-209ENST00000536625 SPART-AS1P0CW21 52 aa2.34□□□□□ -2.03
KNTC1-209ENST00000536625 LINC01556Q5JQF7 62 aa2.34□□□□□ -2.03
KNTC1-209ENST00000536625 Q6ZRN7 208 aaPredicted RBP2.34□□□□□ -2.03
KNTC1-209ENST00000536625 CSMD1Q96PZ7 3565 aa2.34□□□□□ -2.03
KNTC1-209ENST00000536625 ROS1P08922 2347 aa2.34□□□□□ -2.04
KNTC1-209ENST00000536625 MAP1BP46821 2468 aaKnown RBP2.33□□□□□ -2.04
KNTC1-209ENST00000536625 WDFY3Q8IZQ1 3526 aa2.33□□□□□ -2.04
KNTC1-209ENST00000536625 KRTAP13-1Q8IUC0 172 aa2.33□□□□□ -2.04
KNTC1-209ENST00000536625 S4R3F8 94 aa2.33□□□□□ -2.04
KNTC1-209ENST00000536625 ASH1LQ9NR48 2969 aaKnown RBP2.33□□□□□ -2.04
KNTC1-209ENST00000536625 CELSR2Q9HCU4 2923 aa2.32□□□□□ -2.04
KNTC1-209ENST00000536625 A0A0D9SG42 100 aa2.32□□□□□ -2.04
KNTC1-209ENST00000536625 H3BNG1 76 aa2.32□□□□□ -2.04
KNTC1-209ENST00000536625 APLNQ9ULZ1 77 aa2.32□□□□□ -2.04
KNTC1-209ENST00000536625 EP300Q09472 2414 aaPredicted RBP2.32□□□□□ -2.04
KNTC1-209ENST00000536625 BOD1L1Q8NFC6 3051 aa2.32□□□□□ -2.04
KNTC1-209ENST00000536625 SPEGQ15772 3267 aa2.31□□□□□ -2.04
KNTC1-209ENST00000536625 SPTBN4Q9H254 2564 aa2.31□□□□□ -2.04
KNTC1-209ENST00000536625 AKAP13Q12802 2813 aa2.31□□□□□ -2.04
KNTC1-209ENST00000536625 DSPP15924 2871 aaKnown RBP2.31□□□□□ -2.04
KNTC1-209ENST00000536625 TRANK1O15050 2925 aa2.31□□□□□ -2.04
KNTC1-209ENST00000536625 INE1O15225 51 aa2.31□□□□□ -2.04
KNTC1-209ENST00000536625 SETXQ7Z333 2677 aaKnown RBP2.31□□□□□ -2.04
KNTC1-209ENST00000536625 NBPF19A0A087WUL8 3843 aa2.31□□□□□ -2.04
KNTC1-209ENST00000536625 MUC3AQ02505 3323 aa2.3□□□□□ -2.04
KNTC1-209ENST00000536625 NCOR1O75376 2440 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms