RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 ANKRD29Q8N6D5 301 aa7.23□□□□□ -1.25
PRKDC-207ENST00000536483 PPDPFLQ8WWR9 84 aa7.23□□□□□ -1.25
PRKDC-207ENST00000536483 HIGD2AQ9BW72 106 aa7.23□□□□□ -1.25
PRKDC-207ENST00000536483 ZNF706Q9Y5V0 76 aaPredicted RBP7.23□□□□□ -1.25
PRKDC-207ENST00000536483 SMCPP49901 116 aaPredicted RBP7.22□□□□□ -1.25
PRKDC-207ENST00000536483 ETDCA0A1B0GVM5 59 aa7.21□□□□□ -1.26
PRKDC-207ENST00000536483 B5MCH6 92 aa7.21□□□□□ -1.26
PRKDC-207ENST00000536483 C9JAW5 83 aa7.21□□□□□ -1.26
PRKDC-207ENST00000536483 LINC00483Q53H64 154 aa7.21□□□□□ -1.26
PRKDC-207ENST00000536483 LCE2AQ5TA79 106 aaPredicted RBP7.21□□□□□ -1.26
PRKDC-207ENST00000536483 SMCR5Q8TEV8 140 aa7.21□□□□□ -1.26
PRKDC-207ENST00000536483 MUC17Q685J3 4493 aa7.2□□□□□ -1.26
PRKDC-207ENST00000536483 A0A1B0GX51 115 aa7.2□□□□□ -1.26
PRKDC-207ENST00000536483 LINC00304Q8N9R0 145 aa7.2□□□□□ -1.26
PRKDC-207ENST00000536483 VPS25Q9BRG1 176 aa7.2□□□□□ -1.26
PRKDC-207ENST00000536483 Q6ZRX8 168 aa7.19□□□□□ -1.26
PRKDC-207ENST00000536483 RETNLBQ9BQ08 111 aa7.19□□□□□ -1.26
PRKDC-207ENST00000536483 SPAG11AQ6PDA7 123 aa7.18□□□□□ -1.26
PRKDC-207ENST00000536483 SNCGO76070 127 aa7.17□□□□□ -1.26
PRKDC-207ENST00000536483 S100A7L2Q5SY68 101 aa7.17□□□□□ -1.26
PRKDC-207ENST00000536483 C3orf22Q8N5N4 141 aa7.17□□□□□ -1.26
PRKDC-207ENST00000536483 Q9BRP9 147 aa7.17□□□□□ -1.26
PRKDC-207ENST00000536483 TRAV23DV6A0A075B6W5 121 aa7.16□□□□□ -1.26
PRKDC-207ENST00000536483 ZNF73O43830 326 aaPredicted RBP7.15□□□□□ -1.26
PRKDC-207ENST00000536483 ERC2-IT1O76042 136 aa7.15□□□□□ -1.26
PRKDC-207ENST00000536483 SMIM11BQ8TCY0 68 aa7.15□□□□□ -1.26
PRKDC-207ENST00000536483 CLEC2BQ92478 149 aa7.15□□□□□ -1.26
PRKDC-207ENST00000536483 H3BQ85 93 aa7.14□□□□□ -1.27
PRKDC-207ENST00000536483 MTURNQ8N3F0 131 aa7.14□□□□□ -1.27
PRKDC-207ENST00000536483 OR13C6PQ8NH95 151 aa7.14□□□□□ -1.27
PRKDC-207ENST00000536483 CDIP1Q9H305 208 aa7.14□□□□□ -1.27
PRKDC-207ENST00000536483 DNAL4O96015 105 aa7.13□□□□□ -1.27
PRKDC-207ENST00000536483 IGLV7-46A0A075B6I9 117 aa7.12□□□□□ -1.27
PRKDC-207ENST00000536483 TPRXLQ17RH7 258 aa7.12□□□□□ -1.27
PRKDC-207ENST00000536483 SSBP3-AS1Q7Z2R9 100 aa7.12□□□□□ -1.27
PRKDC-207ENST00000536483 FAM240AA0A1B0GVK7 77 aa7.11□□□□□ -1.27
PRKDC-207ENST00000536483 SIGMAR1Q99720 223 aa7.11□□□□□ -1.27
PRKDC-207ENST00000536483 KRTAP9-6A0A140TA67 174 aa7.1□□□□□ -1.27
PRKDC-207ENST00000536483 SPINK1P00995 79 aa7.1□□□□□ -1.27
PRKDC-207ENST00000536483 GHRHP01286 108 aa7.1□□□□□ -1.27
PRKDC-207ENST00000536483 ACYP1P07311 99 aa7.1□□□□□ -1.27
PRKDC-207ENST00000536483 BAALC-AS2P0C853 105 aa7.1□□□□□ -1.27
PRKDC-207ENST00000536483 SPRR1BP22528 89 aa7.1□□□□□ -1.27
PRKDC-207ENST00000536483 RPS29P62273 56 aaKnown RBP7.1□□□□□ -1.27
PRKDC-207ENST00000536483 GAGE2AQ6NT46 116 aa7.1□□□□□ -1.27
PRKDC-207ENST00000536483 TRBV7-6A0A0J9YX20 115 aa7.09□□□□□ -1.27
PRKDC-207ENST00000536483 SCGB1A1P11684 91 aa7.09□□□□□ -1.27
PRKDC-207ENST00000536483 Q8NBF4 154 aa7.09□□□□□ -1.27
PRKDC-207ENST00000536483 C4orf48Q5BLP8 95 aa7.08□□□□□ -1.28
PRKDC-207ENST00000536483 DHRS4-AS1Q9P1J3 65 aa7.08□□□□□ -1.28
PRKDC-207ENST00000536483 ELOF1P60002 83 aaKnown RBP7.07□□□□□ -1.28
PRKDC-207ENST00000536483 FP248Q71RG6 208 aaPredicted RBP7.07□□□□□ -1.28
PRKDC-207ENST00000536483 FAM218AQ96MZ4 157 aa7.07□□□□□ -1.28
PRKDC-207ENST00000536483 TEX49A0A1B0GTD5 131 aa7.06□□□□□ -1.28
PRKDC-207ENST00000536483 TMEM256-PLSCR3K7ERE1 68 aa7.06□□□□□ -1.28
PRKDC-207ENST00000536483 ORMDL1Q9P0S3 153 aa7.06□□□□□ -1.28
PRKDC-207ENST00000536483 MOBPQ13875 183 aa7.04□□□□□ -1.28
PRKDC-207ENST00000536483 C21orf62-AS1Q17RA5 79 aa7.04□□□□□ -1.28
PRKDC-207ENST00000536483 C6orf99Q4VX62 202 aa7.04□□□□□ -1.28
PRKDC-207ENST00000536483 ST20-AS1Q8NBB2 130 aa7.04□□□□□ -1.28
PRKDC-207ENST00000536483 JMJD7-PLA2G4BH0Y9G9 81 aa7.03□□□□□ -1.28
PRKDC-207ENST00000536483 COX7BP24311 80 aa7.03□□□□□ -1.28
PRKDC-207ENST00000536483 LINC00575Q6W349 94 aa7.03□□□□□ -1.28
PRKDC-207ENST00000536483 OBSCN-AS1Q96MR7 158 aa7.03□□□□□ -1.28
PRKDC-207ENST00000536483 IGLV9-49A0A0B4J1Y8 123 aa7.02□□□□□ -1.29
PRKDC-207ENST00000536483 hADV29S1A0JD25 119 aa7.01□□□□□ -1.29
PRKDC-207ENST00000536483 Q8N377 158 aa7.01□□□□□ -1.29
PRKDC-207ENST00000536483 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7□□□□□ -1.29
PRKDC-207ENST00000536483 PCP4P48539 62 aa6.99□□□□□ -1.29
PRKDC-207ENST00000536483 IGLV5-48A0A075B6I7 105 aa6.98□□□□□ -1.29
PRKDC-207ENST00000536483 KRTAP13-3Q3SY46 172 aa6.98□□□□□ -1.29
PRKDC-207ENST00000536483 LAMTOR3Q9UHA4 124 aa6.98□□□□□ -1.29
PRKDC-207ENST00000536483 PDE6GP18545 87 aa6.97□□□□□ -1.29
PRKDC-207ENST00000536483 LINC01547P58512 204 aaPredicted RBP6.97□□□□□ -1.29
PRKDC-207ENST00000536483 Q6Q795 121 aa6.97□□□□□ -1.29
PRKDC-207ENST00000536483 C9orf153Q5TBE3 101 aa6.96□□□□□ -1.3
PRKDC-207ENST00000536483 SMIM29Q86T20 159 aa6.96□□□□□ -1.3
PRKDC-207ENST00000536483 CD164Q04900 197 aa6.95□□□□□ -1.3
PRKDC-207ENST00000536483 ASB16-AS1Q495Z4 193 aa6.95□□□□□ -1.3
PRKDC-207ENST00000536483 IMUPQ9GZP8 106 aa6.95□□□□□ -1.3
PRKDC-207ENST00000536483 LINC00643Q86TS7 51 aa6.94□□□□□ -1.3
PRKDC-207ENST00000536483 KRTAP4-1Q9BYQ7 146 aa6.94□□□□□ -1.3
PRKDC-207ENST00000536483 Q5XG85 94 aa6.93□□□□□ -1.3
PRKDC-207ENST00000536483 MT-ATP8P03928 68 aa6.92□□□□□ -1.3
PRKDC-207ENST00000536483 CCKP06307 115 aa6.92□□□□□ -1.3
PRKDC-207ENST00000536483 FSIP2Q5CZC0 6907 aa6.91□□□□□ -1.3
PRKDC-207ENST00000536483 LOC110117498A0A087WWA1 95 aa6.91□□□□□ -1.3
PRKDC-207ENST00000536483 RBM3P98179 157 aaKnown RBP6.91□□□□□ -1.3
PRKDC-207ENST00000536483 SEC61BP60468 96 aaKnown RBP6.9□□□□□ -1.3
PRKDC-207ENST00000536483 Q6ZQY7 126 aa6.9□□□□□ -1.3
PRKDC-207ENST00000536483 DEFB105AQ8NG35 78 aa6.9□□□□□ -1.3
PRKDC-207ENST00000536483 LIMD2Q9BT23 127 aa6.9□□□□□ -1.3
PRKDC-207ENST00000536483 TRBV7-7A0A0K0K1E9 115 aa6.89□□□□□ -1.31
PRKDC-207ENST00000536483 C14orf132Q9NPU4 83 aa6.89□□□□□ -1.31
PRKDC-207ENST00000536483 DSCR8Q96T75 97 aa6.88□□□□□ -1.31
PRKDC-207ENST00000536483 XP32Q5T750 250 aa6.87□□□□□ -1.31
PRKDC-207ENST00000536483 A0A1B0GW54 56 aa6.86□□□□□ -1.31
PRKDC-207ENST00000536483 ATP5EP2Q5VTU8 51 aa6.86□□□□□ -1.31
PRKDC-207ENST00000536483 IGLV8-61A0A075B6I0 122 aa6.85□□□□□ -1.31
PRKDC-207ENST00000536483 NDUFV3P56181 108 aaKnown RBP6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms