RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 CEND1Q8N111 149 aa7.31□□□□□ -1.24
PRKDC-206ENST00000536429 RAB37Q96AX2 223 aa7.31□□□□□ -1.24
PRKDC-206ENST00000536429 LIMD2Q9BT23 127 aa7.3□□□□□ -1.24
PRKDC-206ENST00000536429 CD164Q04900 197 aa7.29□□□□□ -1.24
PRKDC-206ENST00000536429 BVES-AS1Q5T3Y7 98 aa7.29□□□□□ -1.24
PRKDC-206ENST00000536429 FAM218AQ96MZ4 157 aa7.28□□□□□ -1.24
PRKDC-206ENST00000536429 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.27□□□□□ -1.25
PRKDC-206ENST00000536429 F8WEM9 126 aa7.25□□□□□ -1.25
PRKDC-206ENST00000536429 Q5XG85 94 aa7.25□□□□□ -1.25
PRKDC-206ENST00000536429 K7ERJ3 54 aa7.24□□□□□ -1.25
PRKDC-206ENST00000536429 XP32Q5T750 250 aa7.24□□□□□ -1.25
PRKDC-206ENST00000536429 PRO1854Q9UHT4 67 aa7.24□□□□□ -1.25
PRKDC-206ENST00000536429 IGLV8-61A0A075B6I0 122 aa7.23□□□□□ -1.25
PRKDC-206ENST00000536429 TMEM238LA0A1B0GVL6 79 aa7.23□□□□□ -1.25
PRKDC-206ENST00000536429 A6NJY4 79 aa7.23□□□□□ -1.25
PRKDC-206ENST00000536429 HSD52Q0P140 79 aa7.23□□□□□ -1.25
PRKDC-206ENST00000536429 ASB16-AS1Q495Z4 193 aa7.23□□□□□ -1.25
PRKDC-206ENST00000536429 C1orf195Q5TG92 126 aa7.23□□□□□ -1.25
PRKDC-206ENST00000536429 IGFL1Q6UW32 110 aa7.23□□□□□ -1.25
PRKDC-206ENST00000536429 C9orf92A6NGG3 77 aa7.22□□□□□ -1.25
PRKDC-206ENST00000536429 H0YGX0 51 aa7.22□□□□□ -1.25
PRKDC-206ENST00000536429 H3BUT2 72 aa7.22□□□□□ -1.25
PRKDC-206ENST00000536429 TRIAP1O43715 76 aa7.22□□□□□ -1.25
PRKDC-206ENST00000536429 OCIAD2Q56VL3 154 aa7.22□□□□□ -1.25
PRKDC-206ENST00000536429 KRTAP4-1Q9BYQ7 146 aa7.22□□□□□ -1.25
PRKDC-206ENST00000536429 SNHG12Q9BXW3 62 aa7.21□□□□□ -1.26
PRKDC-206ENST00000536429 UQCR10Q9UDW1 63 aa7.21□□□□□ -1.26
PRKDC-206ENST00000536429 Q6JHZ5 121 aa7.2□□□□□ -1.26
PRKDC-206ENST00000536429 PPDPFLQ8WWR9 84 aa7.2□□□□□ -1.26
PRKDC-206ENST00000536429 CLEC2BQ92478 149 aa7.2□□□□□ -1.26
PRKDC-206ENST00000536429 TRBV7-7A0A0K0K1E9 115 aa7.18□□□□□ -1.26
PRKDC-206ENST00000536429 SEC61BP60468 96 aaKnown RBP7.17□□□□□ -1.26
PRKDC-206ENST00000536429 A0A0U1RQV1 116 aa7.16□□□□□ -1.26
PRKDC-206ENST00000536429 TCL1BO95988 128 aa7.16□□□□□ -1.26
PRKDC-206ENST00000536429 A0A1B0GX51 115 aa7.15□□□□□ -1.26
PRKDC-206ENST00000536429 NDUFV3P56181 108 aaKnown RBP7.15□□□□□ -1.26
PRKDC-206ENST00000536429 SNCGO76070 127 aa7.14□□□□□ -1.27
PRKDC-206ENST00000536429 FABP2P12104 132 aa7.13□□□□□ -1.27
PRKDC-206ENST00000536429 PSMB2P49721 201 aa7.13□□□□□ -1.27
PRKDC-206ENST00000536429 LCE2AQ5TA79 106 aaPredicted RBP7.12□□□□□ -1.27
PRKDC-206ENST00000536429 PCOTHQ58A44 107 aa7.11□□□□□ -1.27
PRKDC-206ENST00000536429 H3BMG7 143 aa7.1□□□□□ -1.27
PRKDC-206ENST00000536429 A0A1B0GV72 72 aa7.09□□□□□ -1.27
PRKDC-206ENST00000536429 Q6Q795 121 aa7.09□□□□□ -1.27
PRKDC-206ENST00000536429 KRTAP3-3Q9BYR6 98 aa7.08□□□□□ -1.28
PRKDC-206ENST00000536429 KRTAP3-2Q9BYR7 98 aa7.08□□□□□ -1.28
PRKDC-206ENST00000536429 DNAL4O96015 105 aa7.07□□□□□ -1.28
PRKDC-206ENST00000536429 COX6CP09669 75 aa7.07□□□□□ -1.28
PRKDC-206ENST00000536429 TEN1Q86WV5 123 aa7.07□□□□□ -1.28
PRKDC-206ENST00000536429 ORMDL1Q9P0S3 153 aa7.07□□□□□ -1.28
PRKDC-206ENST00000536429 A0A087WSZ3 146 aa7.06□□□□□ -1.28
PRKDC-206ENST00000536429 A0A1W2PNM2 257 aa7.06□□□□□ -1.28
PRKDC-206ENST00000536429 LST1O00453 97 aa7.05□□□□□ -1.28
PRKDC-206ENST00000536429 GHRHP01286 108 aa7.05□□□□□ -1.28
PRKDC-206ENST00000536429 SMIM6P0DI80 62 aa7.05□□□□□ -1.28
PRKDC-206ENST00000536429 RPL37P61927 97 aaKnown RBP7.05□□□□□ -1.28
PRKDC-206ENST00000536429 SCGB1C2P0DMR2 95 aa7.04□□□□□ -1.28
PRKDC-206ENST00000536429 Q96NJ1 140 aa7.03□□□□□ -1.28
PRKDC-206ENST00000536429 NAA38Q9BRA0 125 aaKnown RBP7.03□□□□□ -1.28
PRKDC-206ENST00000536429 TMEM256-PLSCR3K7ERE1 68 aa7.02□□□□□ -1.29
PRKDC-206ENST00000536429 TRACP01848 142 aa7.02□□□□□ -1.29
PRKDC-206ENST00000536429 OBSCN-AS1Q96MR7 158 aa7.02□□□□□ -1.29
PRKDC-206ENST00000536429 SS18L2Q9UHA2 77 aa7.02□□□□□ -1.29
PRKDC-206ENST00000536429 KRTAP19-2Q3LHN2 52 aa7.01□□□□□ -1.29
PRKDC-206ENST00000536429 ANKRD29Q8N6D5 301 aa7.01□□□□□ -1.29
PRKDC-206ENST00000536429 LOC105371267A0A1B0GV96 52 aa7□□□□□ -1.29
PRKDC-206ENST00000536429 H3BQ85 93 aa7□□□□□ -1.29
PRKDC-206ENST00000536429 LCE2CQ5TA81 110 aa7□□□□□ -1.29
PRKDC-206ENST00000536429 M0R143 59 aa6.99□□□□□ -1.29
PRKDC-206ENST00000536429 UBE2V1Q13404 147 aa6.99□□□□□ -1.29
PRKDC-206ENST00000536429 TRBV7-4A0A0J9YYF1 115 aa6.97□□□□□ -1.29
PRKDC-206ENST00000536429 CCKP06307 115 aa6.95□□□□□ -1.3
PRKDC-206ENST00000536429 BAALC-AS2P0C853 105 aa6.95□□□□□ -1.3
PRKDC-206ENST00000536429 TSTD3H0UI37 97 aa6.94□□□□□ -1.3
PRKDC-206ENST00000536429 Q75L30 129 aa6.94□□□□□ -1.3
PRKDC-206ENST00000536429 FLGP20930 4061 aaPredicted RBP6.94□□□□□ -1.3
PRKDC-206ENST00000536429 DSCR10P59022 87 aa6.93□□□□□ -1.3
PRKDC-206ENST00000536429 BATFQ16520 125 aa6.93□□□□□ -1.3
PRKDC-206ENST00000536429 DEFB116Q30KQ4 102 aa6.93□□□□□ -1.3
PRKDC-206ENST00000536429 SIGMAR1Q99720 223 aa6.93□□□□□ -1.3
PRKDC-206ENST00000536429 RBM3P98179 157 aaKnown RBP6.92□□□□□ -1.3
PRKDC-206ENST00000536429 ATXN8Q156A1 80 aa6.92□□□□□ -1.3
PRKDC-206ENST00000536429 VPS25Q9BRG1 176 aa6.92□□□□□ -1.3
PRKDC-206ENST00000536429 LINC00472Q9H8W2 130 aa6.92□□□□□ -1.3
PRKDC-206ENST00000536429 IGKV4-1P06312 121 aa6.91□□□□□ -1.3
PRKDC-206ENST00000536429 C20orf166-AS1Q96NR2 134 aa6.9□□□□□ -1.3
PRKDC-206ENST00000536429 A8MUU9 505 aa6.89□□□□□ -1.31
PRKDC-206ENST00000536429 MT1HP80294 61 aa6.89□□□□□ -1.31
PRKDC-206ENST00000536429 NOTCH2NLQ7Z3S9 236 aa6.89□□□□□ -1.31
PRKDC-206ENST00000536429 DSCR8Q96T75 97 aa6.89□□□□□ -1.31
PRKDC-206ENST00000536429 ATP11AUNQ6ZP68 121 aa6.88□□□□□ -1.31
PRKDC-206ENST00000536429 KRTAP9-2Q9BYQ4 174 aa6.87□□□□□ -1.31
PRKDC-206ENST00000536429 KRTAP16-1A8MUX0 517 aa6.86□□□□□ -1.31
PRKDC-206ENST00000536429 C9JAW5 83 aa6.86□□□□□ -1.31
PRKDC-206ENST00000536429 TAX1BP3O14907 124 aa6.85□□□□□ -1.31
PRKDC-206ENST00000536429 LINC00313P59037 77 aa6.85□□□□□ -1.31
PRKDC-206ENST00000536429 Q6ZQT0 140 aa6.84□□□□□ -1.31
PRKDC-206ENST00000536429 IGHV6-1A0A0B4J1U7 121 aa6.83□□□□□ -1.32
PRKDC-206ENST00000536429 C9orf118A6NHY6 69 aa6.83□□□□□ -1.32
PRKDC-206ENST00000536429 TRBV20-1A0A075B6N2 111 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms