RNA–Protein interactions for RNA: ENST00000535076.5

SNHG1-201, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-201ENST00000535076 CRIPTQ9P021 101 aa2.88□□□□□ -1.95
SNHG1-201ENST00000535076 OTOGLQ3ZCN5 2332 aa2.88□□□□□ -1.95
SNHG1-201ENST00000535076 MGAQ8IWI9 3026 aa2.87□□□□□ -1.95
SNHG1-201ENST00000535076 DMDP11532 3685 aa2.86□□□□□ -1.95
SNHG1-201ENST00000535076 CEP295Q9C0D2 2601 aa2.86□□□□□ -1.95
SNHG1-201ENST00000535076 LY6EQ16553 131 aa2.86□□□□□ -1.95
SNHG1-201ENST00000535076 LCE1FQ5T754 118 aa2.86□□□□□ -1.95
SNHG1-201ENST00000535076 TPRP12270 2363 aaKnown RBP2.86□□□□□ -1.95
SNHG1-201ENST00000535076 CHD8Q9HCK8 2581 aa2.85□□□□□ -1.95
SNHG1-201ENST00000535076 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.85□□□□□ -1.952e-20■■■■■ 88
SNHG1-201ENST00000535076 H1FX-AS1Q4G0G2 97 aa2.85□□□□□ -1.95
SNHG1-201ENST00000535076 PLAC4Q8WY50 150 aa2.85□□□□□ -1.95
SNHG1-201ENST00000535076 CACNA1AO00555 2505 aa2.85□□□□□ -1.95
SNHG1-201ENST00000535076 COL6A6A6NMZ7 2263 aa2.85□□□□□ -1.95
SNHG1-201ENST00000535076 LAMA1P25391 3075 aa2.84□□□□□ -1.95
SNHG1-201ENST00000535076 CFAP54Q96N23 3096 aa2.84□□□□□ -1.95
SNHG1-201ENST00000535076 GIG44P09565 113 aaPredicted RBP2.84□□□□□ -1.95
SNHG1-201ENST00000535076 KRTAP10-5P60370 271 aa2.84□□□□□ -1.95
SNHG1-201ENST00000535076 U3KQA8 63 aa2.84□□□□□ -1.95
SNHG1-201ENST00000535076 USP34Q70CQ2 3546 aa2.84□□□□□ -1.95
SNHG1-201ENST00000535076 DMXL1Q9Y485 3027 aa2.84□□□□□ -1.96
SNHG1-201ENST00000535076 NOP10Q9NPE3 64 aaKnown RBP2.83□□□□□ -1.96
SNHG1-201ENST00000535076 PRO0255Q9UI72 69 aa2.83□□□□□ -1.96
SNHG1-201ENST00000535076 CACNA1EQ15878 2313 aa2.83□□□□□ -1.96
SNHG1-201ENST00000535076 MYO15AQ9UKN7 3530 aa2.83□□□□□ -1.96
SNHG1-201ENST00000535076 NCOR2Q9Y618 2525 aa2.83□□□□□ -1.96
SNHG1-201ENST00000535076 EPG5Q9HCE0 2579 aa2.82□□□□□ -1.96
SNHG1-201ENST00000535076 AKAP13Q12802 2813 aa2.82□□□□□ -1.96
SNHG1-201ENST00000535076 RPL37P61927 97 aaKnown RBP2.81□□□□□ -1.96
SNHG1-201ENST00000535076 ACACBO00763 2458 aa2.81□□□□□ -1.96
SNHG1-201ENST00000535076 CHD6Q8TD26 2715 aa2.81□□□□□ -1.96
SNHG1-201ENST00000535076 ANKRD11Q6UB99 2663 aaPredicted RBP2.8□□□□□ -1.96
SNHG1-201ENST00000535076 A0A1W2PPR1 153 aa2.8□□□□□ -1.96
SNHG1-201ENST00000535076 INE1O15225 51 aa2.8□□□□□ -1.96
SNHG1-201ENST00000535076 LELP1Q5T871 98 aa2.8□□□□□ -1.96
SNHG1-201ENST00000535076 DSPP15924 2871 aaKnown RBP2.8□□□□□ -1.96
SNHG1-201ENST00000535076 NOTCH3Q9UM47 2321 aa2.79□□□□□ -1.96
SNHG1-201ENST00000535076 LYNX1P0DP58 116 aa2.79□□□□□ -1.96
SNHG1-201ENST00000535076 DEFB130BP0DP73 79 aa2.79□□□□□ -1.96
SNHG1-201ENST00000535076 DEFB130AP0DP74 79 aa2.79□□□□□ -1.96
SNHG1-201ENST00000535076 KRTAP10-12P60413 245 aa2.79□□□□□ -1.96
SNHG1-201ENST00000535076 DCHS1Q96JQ0 3298 aa2.79□□□□□ -1.96
SNHG1-201ENST00000535076 IGF2RP11717 2491 aa2.79□□□□□ -1.96
SNHG1-201ENST00000535076 DNAH14Q0VDD8 3507 aa2.79□□□□□ -1.96
SNHG1-201ENST00000535076 ZFYVE26Q68DK2 2539 aa2.78□□□□□ -1.96
SNHG1-201ENST00000535076 C10orf99Q6UWK7 81 aa2.78□□□□□ -1.96
SNHG1-201ENST00000535076 R4GN34 69 aa2.78□□□□□ -1.96
SNHG1-201ENST00000535076 ZZEF1O43149 2961 aa2.78□□□□□ -1.96
SNHG1-201ENST00000535076 MAP1BP46821 2468 aaKnown RBP2.78□□□□□ -1.96
SNHG1-201ENST00000535076 USP24Q9UPU5 2620 aa2.77□□□□□ -1.97
SNHG1-201ENST00000535076 ITPR1Q14643 2758 aa2.77□□□□□ -1.97
SNHG1-201ENST00000535076 ACACAQ13085 2346 aa2.76□□□□□ -1.97
SNHG1-201ENST00000535076 FRYQ5TBA9 3013 aa2.76□□□□□ -1.97
SNHG1-201ENST00000535076 DMXL2Q8TDJ6 3036 aa2.76□□□□□ -1.97
SNHG1-201ENST00000535076 K7EIL1 84 aa2.76□□□□□ -1.97
SNHG1-201ENST00000535076 Q6ZRN7 208 aaPredicted RBP2.76□□□□□ -1.97
SNHG1-201ENST00000535076 PRRC2CQ9Y520 2896 aaKnown RBP2.76□□□□□ -1.97
SNHG1-201ENST00000535076 NBEAQ8NFP9 2946 aa2.75□□□□□ -1.97
SNHG1-201ENST00000535076 CFAP46Q8IYW2 2715 aa2.75□□□□□ -1.97
SNHG1-201ENST00000535076 BRD3OSQ6XYD6 125 aa2.75□□□□□ -1.97
SNHG1-201ENST00000535076 SPACA4Q8TDM5 124 aa2.75□□□□□ -1.97
SNHG1-201ENST00000535076 IGSF10Q6WRI0 2623 aa2.75□□□□□ -1.97
SNHG1-201ENST00000535076 APC2O95996 2303 aa2.75□□□□□ -1.97
SNHG1-201ENST00000535076 PKDREJQ9NTG1 2253 aa2.75□□□□□ -1.97
SNHG1-201ENST00000535076 PKD1L2Q7Z442 2459 aa2.75□□□□□ -1.97
SNHG1-201ENST00000535076 FREM2Q5SZK8 3169 aa2.74□□□□□ -1.97
SNHG1-201ENST00000535076 C14orf177Q52M58 125 aa2.74□□□□□ -1.97
SNHG1-201ENST00000535076 PIEZO2Q9H5I5 2752 aa2.74□□□□□ -1.97
SNHG1-201ENST00000535076 SPEGQ15772 3267 aa2.73□□□□□ -1.97
SNHG1-201ENST00000535076 ATRXP46100 2492 aa2.73□□□□□ -1.97
SNHG1-201ENST00000535076 SPTA1P02549 2419 aa2.72□□□□□ -1.97
SNHG1-201ENST00000535076 FLNCQ14315 2725 aa2.72□□□□□ -1.97
SNHG1-201ENST00000535076 TLN1Q9Y490 2541 aaKnown RBP2.72□□□□□ -1.97
SNHG1-201ENST00000535076 HELZ2Q9BYK8 2649 aaKnown RBP2.72□□□□□ -1.97
SNHG1-201ENST00000535076 AKAP6Q13023 2319 aa2.71□□□□□ -1.97
SNHG1-201ENST00000535076 FASNP49327 2511 aaKnown RBP2.71□□□□□ -1.98
SNHG1-201ENST00000535076 FLG2Q5D862 2391 aaPredicted RBP2.71□□□□□ -1.98
SNHG1-201ENST00000535076 PCNX1Q96RV3 2341 aa2.71□□□□□ -1.98
SNHG1-201ENST00000535076 RP1L1Q8IWN7 2480 aaPredicted RBP2.7□□□□□ -1.98
SNHG1-201ENST00000535076 KALRNO60229 2985 aa2.7□□□□□ -1.98
SNHG1-201ENST00000535076 ZFHX4Q86UP3 3567 aa2.7□□□□□ -1.98
SNHG1-201ENST00000535076 LAMA5O15230 3695 aa2.7□□□□□ -1.98
SNHG1-201ENST00000535076 ASPMQ8IZT6 3477 aa2.7□□□□□ -1.98
SNHG1-201ENST00000535076 DEFB136Q30KP8 78 aa2.7□□□□□ -1.98
SNHG1-201ENST00000535076 KRTAP7-1Q8IUC3 87 aa2.7□□□□□ -1.98
SNHG1-201ENST00000535076 NBASA2RRP1 2371 aa2.69□□□□□ -1.98
SNHG1-201ENST00000535076 FAM208BQ5VWN6 2430 aa2.69□□□□□ -1.98
SNHG1-201ENST00000535076 KRTAP9-6A8MVA2 160 aa2.69□□□□□ -1.98
SNHG1-201ENST00000535076 H3BNG1 76 aa2.69□□□□□ -1.98
SNHG1-201ENST00000535076 CELSR3Q9NYQ7 3312 aa2.68□□□□□ -1.98
SNHG1-201ENST00000535076 CENPEQ02224 2701 aa2.68□□□□□ -1.98
SNHG1-201ENST00000535076 CFAP47Q6ZTR5 3102 aa2.68□□□□□ -1.98
SNHG1-201ENST00000535076 KRTAP12-2P59991 146 aa2.68□□□□□ -1.98
SNHG1-201ENST00000535076 LCE3CQ5T5A8 94 aa2.68□□□□□ -1.98
SNHG1-201ENST00000535076 C10orf95Q9H7T3 257 aa2.68□□□□□ -1.98
SNHG1-201ENST00000535076 MYO18BQ8IUG5 2567 aa2.68□□□□□ -1.98
SNHG1-201ENST00000535076 GCN1Q92616 2671 aaKnown RBP2.68□□□□□ -1.98
SNHG1-201ENST00000535076 ATMQ13315 3056 aa2.67□□□□□ -1.98
SNHG1-201ENST00000535076 PRLHP81277 87 aa2.67□□□□□ -1.98
SNHG1-201ENST00000535076 UBE2DNLQ8IWF7 75 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms