RNA–Protein interactions for RNA: ENST00000534320.5

PHRF1-206, Transcript of PHD and ring finger domains 1, humanhuman

TSL 5

Gene PHRF1, Length 5,178 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-206ENST00000534320 FRYLO94915 3013 aa11.03□□□□□ -0.64
PHRF1-206ENST00000534320 NBEAQ8NFP9 2946 aa11.03□□□□□ -0.64
PHRF1-206ENST00000534320 ATMQ13315 3056 aa11.03□□□□□ -0.64
PHRF1-206ENST00000534320 A0A1B0GVX0 72 aa11.03□□□□□ -0.64
PHRF1-206ENST00000534320 FLNCQ14315 2725 aa11.02□□□□□ -0.65
PHRF1-206ENST00000534320 REV3LO60673 3130 aa11.02□□□□□ -0.65
PHRF1-206ENST00000534320 GCN1Q92616 2671 aaKnown RBP11□□□□□ -0.65
PHRF1-206ENST00000534320 ADGRG4Q8IZF6 3080 aa10.99□□□□□ -0.65
PHRF1-206ENST00000534320 DMXL2Q8TDJ6 3036 aa10.99□□□□□ -0.65
PHRF1-206ENST00000534320 A0A1W2PNM2 257 aa10.98□□□□□ -0.65
PHRF1-206ENST00000534320 Q5XG85 94 aa10.97□□□□□ -0.65
PHRF1-206ENST00000534320 PSORS1C2Q9UIG4 136 aa10.96□□□□□ -0.66
PHRF1-206ENST00000534320 SETXQ7Z333 2677 aaKnown RBP10.96□□□□□ -0.66
PHRF1-206ENST00000534320 Q75L30 129 aa10.96□□□□□ -0.66
PHRF1-206ENST00000534320 IGLV5-48A0A075B6I7 105 aa10.95□□□□□ -0.66
PHRF1-206ENST00000534320 OCR1Q9BZK8 76 aa10.95□□□□□ -0.66
PHRF1-206ENST00000534320 COL6A5A8TX70 2615 aa10.93□□□□□ -0.66
PHRF1-206ENST00000534320 EYSQ5T1H1 3165 aa10.93□□□□□ -0.66
PHRF1-206ENST00000534320 DSCR10P59022 87 aa10.93□□□□□ -0.66
PHRF1-206ENST00000534320 SPRR4Q96PI1 79 aa10.92□□□□□ -0.66
PHRF1-206ENST00000534320 ANAPC11Q9NYG5 84 aa10.92□□□□□ -0.66
PHRF1-206ENST00000534320 IGLV7-43P04211 117 aa10.91□□□□□ -0.66
PHRF1-206ENST00000534320 Q8NDZ9 215 aa10.91□□□□□ -0.66
PHRF1-206ENST00000534320 KALRNO60229 2985 aa10.91□□□□□ -0.66
PHRF1-206ENST00000534320 COL12A1Q99715 3063 aa10.9□□□□□ -0.66
PHRF1-206ENST00000534320 FREM2Q5SZK8 3169 aa10.9□□□□□ -0.67
PHRF1-206ENST00000534320 LRBAP50851 2863 aa10.89□□□□□ -0.67
PHRF1-206ENST00000534320 STAB1Q9NY15 2570 aa10.89□□□□□ -0.67
PHRF1-206ENST00000534320 SPEGQ15772 3267 aa10.89□□□□□ -0.67
PHRF1-206ENST00000534320 NOTCH1P46531 2555 aa10.86□□□□□ -0.67
PHRF1-206ENST00000534320 PRR26Q8N8Z3 221 aa10.86□□□□□ -0.67
PHRF1-206ENST00000534320 UBR5O95071 2799 aaPredicted RBP10.85□□□□□ -0.67
PHRF1-206ENST00000534320 NBEAL2Q6ZNJ1 2754 aa10.85□□□□□ -0.67
PHRF1-206ENST00000534320 FP248Q71RG6 208 aaPredicted RBP10.84□□□□□ -0.67
PHRF1-206ENST00000534320 IGLV7-46A0A075B6I9 117 aa10.82□□□□□ -0.68
PHRF1-206ENST00000534320 ITPR1Q14643 2758 aa10.82□□□□□ -0.68
PHRF1-206ENST00000534320 LINC01558Q9Y6Z2 57 aa10.81□□□□□ -0.68
PHRF1-206ENST00000534320 Q8N9P0 234 aaPredicted RBP10.8□□□□□ -0.68
PHRF1-206ENST00000534320 A0A0D9SG42 100 aa10.8□□□□□ -0.68
PHRF1-206ENST00000534320 TNP2Q05952 138 aa10.8□□□□□ -0.68
PHRF1-206ENST00000534320 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.8□□□□□ -0.68
PHRF1-206ENST00000534320 A0A0A0MQY5 61 aa10.8□□□□□ -0.68
PHRF1-206ENST00000534320 LINC00304Q8N9R0 145 aa10.8□□□□□ -0.68
PHRF1-206ENST00000534320 KRTAP26-1Q6PEX3 210 aa10.78□□□□□ -0.68
PHRF1-206ENST00000534320 PRAC1Q96KF2 57 aa10.78□□□□□ -0.68
PHRF1-206ENST00000534320 SMR3BP02814 79 aaPredicted RBP10.78□□□□□ -0.68
PHRF1-206ENST00000534320 DMXL1Q9Y485 3027 aa10.78□□□□□ -0.68
PHRF1-206ENST00000534320 SPRR1AP35321 89 aa10.76□□□□□ -0.69
PHRF1-206ENST00000534320 FAM229BQ4G0N7 80 aa10.75□□□□□ -0.69
PHRF1-206ENST00000534320 TACC2O95359 2948 aa10.75□□□□□ -0.69
PHRF1-206ENST00000534320 UTP20O75691 2785 aaKnown RBP10.74□□□□□ -0.69
PHRF1-206ENST00000534320 DMAC1Q96GE9 116 aa10.72□□□□□ -0.69
PHRF1-206ENST00000534320 KRTAP1-5Q9BYS1 174 aa10.72□□□□□ -0.69
PHRF1-206ENST00000534320 A0A1B0GU33 70 aa10.71□□□□□ -0.7
PHRF1-206ENST00000534320 Q5VV11 94 aa10.7□□□□□ -0.7
PHRF1-206ENST00000534320 Q8N1X5 172 aa10.7□□□□□ -0.7
PHRF1-206ENST00000534320 ZZEF1O43149 2961 aa10.69□□□□□ -0.7
PHRF1-206ENST00000534320 BAHCC1Q9P281 2608 aa10.68□□□□□ -0.7
PHRF1-206ENST00000534320 CYSTM1Q9H1C7 97 aa10.68□□□□□ -0.7
PHRF1-206ENST00000534320 CSAG1Q6PB30 78 aa10.67□□□□□ -0.7
PHRF1-206ENST00000534320 ITPR2Q14571 2701 aa10.67□□□□□ -0.7
PHRF1-206ENST00000534320 USP34Q70CQ2 3546 aa10.66□□□□□ -0.7
PHRF1-206ENST00000534320 PLAC8Q9NZF1 115 aa10.64□□□□□ -0.71
PHRF1-206ENST00000534320 C9orf92A6NGG3 77 aa10.63□□□□□ -0.71
PHRF1-206ENST00000534320 LOC400499M0QZD8 3231 aa10.62□□□□□ -0.71
PHRF1-206ENST00000534320 HRES1P13985 223 aa10.59□□□□□ -0.71
PHRF1-206ENST00000534320 LINC00483Q53H64 154 aa10.58□□□□□ -0.72
PHRF1-206ENST00000534320 APCP25054 2843 aa10.58□□□□□ -0.72
PHRF1-206ENST00000534320 NBEAL1Q6ZS30 2694 aa10.57□□□□□ -0.72
PHRF1-206ENST00000534320 SPRR1BP22528 89 aa10.56□□□□□ -0.72
PHRF1-206ENST00000534320 MYO15AQ9UKN7 3530 aa10.55□□□□□ -0.72
PHRF1-206ENST00000534320 SPINK7P58062 85 aa10.54□□□□□ -0.72
PHRF1-206ENST00000534320 COX6B2Q6YFQ2 88 aa10.54□□□□□ -0.72
PHRF1-206ENST00000534320 OXTP01178 125 aa10.54□□□□□ -0.72
PHRF1-206ENST00000534320 HRNRQ86YZ3 2850 aaPredicted RBP10.54□□□□□ -0.72
PHRF1-206ENST00000534320 CFAP47Q6ZTR5 3102 aa10.54□□□□□ -0.72
PHRF1-206ENST00000534320 ZANQ9Y493 2812 aa10.52□□□□□ -0.73
PHRF1-206ENST00000534320 HIVEP1P15822 2718 aa10.52□□□□□ -0.73
PHRF1-206ENST00000534320 ASB16-AS1Q495Z4 193 aa10.5□□□□□ -0.73
PHRF1-206ENST00000534320 J3QL48 77 aa10.49□□□□□ -0.73
PHRF1-206ENST00000534320 NSD1Q96L73 2696 aaPredicted RBP10.49□□□□□ -0.73
PHRF1-206ENST00000534320 MMP24-AS1A0A0U1RRL7 71 aa10.47□□□□□ -0.73
PHRF1-206ENST00000534320 KRTAP4-16G5E9R7 235 aaPredicted RBP10.46□□□□□ -0.74
PHRF1-206ENST00000534320 LINC00472Q9H8W2 130 aa10.45□□□□□ -0.74
PHRF1-206ENST00000534320 CAMK2N1Q7Z7J9 78 aa10.42□□□□□ -0.74
PHRF1-206ENST00000534320 PANO1I0J062 215 aa10.38□□□□□ -0.75
PHRF1-206ENST00000534320 KMT2BQ9UMN6 2715 aaPredicted RBP10.38□□□□□ -0.75
PHRF1-206ENST00000534320 KRTAP16-1A8MUX0 517 aa10.38□□□□□ -0.75
PHRF1-206ENST00000534320 ASH1LQ9NR48 2969 aaKnown RBP10.37□□□□□ -0.75
PHRF1-206ENST00000534320 KRTAP10-2P60368 255 aa10.36□□□□□ -0.75
PHRF1-206ENST00000534320 Q6ZR54 194 aa10.35□□□□□ -0.75
PHRF1-206ENST00000534320 NIPBLQ6KC79 2804 aaeCLIP10.34□□□□□ -0.75
PHRF1-206ENST00000534320 KRTAP10-1P60331 282 aa10.33□□□□□ -0.76
PHRF1-206ENST00000534320 ROMO1P60602 79 aa10.33□□□□□ -0.76
PHRF1-206ENST00000534320 CELSR2Q9HCU4 2923 aa10.31□□□□□ -0.76
PHRF1-206ENST00000534320 RPL37P61927 97 aaKnown RBP10.27□□□□□ -0.76
PHRF1-206ENST00000534320 STAB2Q8WWQ8 2551 aa10.27□□□□□ -0.77
PHRF1-206ENST00000534320 Q5W150 140 aa10.26□□□□□ -0.77
PHRF1-206ENST00000534320 ZCCHC13Q8WW36 166 aaKnown RBP10.25□□□□□ -0.77
PHRF1-206ENST00000534320 CRYBG3Q68DQ2 2970 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms