RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 CD164Q04900 197 aa5.17□□□□□ -1.58
SSBP3-215ENST00000533946 PAM16Q9Y3D7 125 aa5.17□□□□□ -1.58
SSBP3-215ENST00000533946 HSBP1L1C9JCN9 74 aa5.16□□□□□ -1.58
SSBP3-215ENST00000533946 H3BUT2 72 aa5.16□□□□□ -1.58
SSBP3-215ENST00000533946 SLC25A34Q6PIV7 304 aa5.16□□□□□ -1.58
SSBP3-215ENST00000533946 IGFL1Q6UW32 110 aa5.16□□□□□ -1.58
SSBP3-215ENST00000533946 HIST1H4GQ99525 98 aa5.16□□□□□ -1.58
SSBP3-215ENST00000533946 LIMD2Q9BT23 127 aa5.16□□□□□ -1.58
SSBP3-215ENST00000533946 IGLV8-61A0A075B6I0 122 aa5.15□□□□□ -1.59
SSBP3-215ENST00000533946 hADV29S1A0JD25 119 aa5.15□□□□□ -1.59
SSBP3-215ENST00000533946 COPS9Q8WXC6 57 aa5.15□□□□□ -1.59
SSBP3-215ENST00000533946 MT1HP80294 61 aa5.14□□□□□ -1.59
SSBP3-215ENST00000533946 SPATA45Q537H7 98 aa5.14□□□□□ -1.59
SSBP3-215ENST00000533946 Q5XG85 94 aa5.14□□□□□ -1.59
SSBP3-215ENST00000533946 DLEU1O43261 78 aa5.12□□□□□ -1.59
SSBP3-215ENST00000533946 OCIAD2Q56VL3 154 aa5.12□□□□□ -1.59
SSBP3-215ENST00000533946 FXYD2P54710 66 aa5.11□□□□□ -1.59
SSBP3-215ENST00000533946 VAMP3Q15836 100 aa5.11□□□□□ -1.59
SSBP3-215ENST00000533946 TRBV7-7A0A0K0K1E9 115 aa5.1□□□□□ -1.59
SSBP3-215ENST00000533946 NHP2Q9NX24 153 aaKnown RBP5.1□□□□□ -1.59
SSBP3-215ENST00000533946 LCE2BO14633 110 aa5.09□□□□□ -1.59
SSBP3-215ENST00000533946 RPL37P61927 97 aaKnown RBP5.09□□□□□ -1.59
SSBP3-215ENST00000533946 PYY3Q5JQD4 70 aa5.09□□□□□ -1.59
SSBP3-215ENST00000533946 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.09□□□□□ -1.59
SSBP3-215ENST00000533946 HIGD1BQ9P298 99 aa5.09□□□□□ -1.59
SSBP3-215ENST00000533946 K7ERJ3 54 aa5.08□□□□□ -1.6
SSBP3-215ENST00000533946 CEND1Q8N111 149 aa5.08□□□□□ -1.6
SSBP3-215ENST00000533946 CLEC2BQ92478 149 aa5.08□□□□□ -1.6
SSBP3-215ENST00000533946 VAMP8Q9BV40 100 aa5.08□□□□□ -1.6
SSBP3-215ENST00000533946 KRTAP9-6A0A140TA67 174 aa5.07□□□□□ -1.6
SSBP3-215ENST00000533946 A0A1B0GV72 72 aa5.07□□□□□ -1.6
SSBP3-215ENST00000533946 F8WEM9 126 aa5.07□□□□□ -1.6
SSBP3-215ENST00000533946 RAB37Q96AX2 223 aa5.07□□□□□ -1.6
SSBP3-215ENST00000533946 OBSCN-AS1Q96MR7 158 aa5.07□□□□□ -1.6
SSBP3-215ENST00000533946 A0A0B4J2C4 111 aa5.06□□□□□ -1.6
SSBP3-215ENST00000533946 TRIAP1O43715 76 aa5.06□□□□□ -1.6
SSBP3-215ENST00000533946 TCL1BO95988 128 aa5.05□□□□□ -1.6
SSBP3-215ENST00000533946 BVES-AS1Q5T3Y7 98 aa5.05□□□□□ -1.6
SSBP3-215ENST00000533946 Q96NJ1 140 aa5.05□□□□□ -1.6
SSBP3-215ENST00000533946 SNHG12Q9BXW3 62 aa5.05□□□□□ -1.6
SSBP3-215ENST00000533946 TMA7Q9Y2S6 64 aaKnown RBP5.05□□□□□ -1.6
SSBP3-215ENST00000533946 A0A1W2PNM2 257 aa5.04□□□□□ -1.6
SSBP3-215ENST00000533946 NDUFV3P56181 108 aaKnown RBP5.04□□□□□ -1.6
SSBP3-215ENST00000533946 Q6JHZ5 121 aa5.04□□□□□ -1.6
SSBP3-215ENST00000533946 FSIP2Q5CZC0 6907 aa5.04□□□□□ -1.6
SSBP3-215ENST00000533946 LORP23490 312 aaPredicted RBP5.03□□□□□ -1.6
SSBP3-215ENST00000533946 PRO1854Q9UHT4 67 aa5.03□□□□□ -1.6
SSBP3-215ENST00000533946 KRTAP16-1A8MUX0 517 aa5.02□□□□□ -1.61
SSBP3-215ENST00000533946 KRTAP10-6P60371 365 aaPredicted RBP5.02□□□□□ -1.61
SSBP3-215ENST00000533946 A0A087WSZ3 146 aa5.01□□□□□ -1.61
SSBP3-215ENST00000533946 NOTCH2NLQ7Z3S9 236 aa5.01□□□□□ -1.61
SSBP3-215ENST00000533946 H0YGX0 51 aa5□□□□□ -1.61
SSBP3-215ENST00000533946 H3BMG7 143 aa5□□□□□ -1.61
SSBP3-215ENST00000533946 FABP2P12104 132 aa5□□□□□ -1.61
SSBP3-215ENST00000533946 DSCR10P59022 87 aa5□□□□□ -1.61
SSBP3-215ENST00000533946 LST1O00453 97 aa4.99□□□□□ -1.61
SSBP3-215ENST00000533946 DEFB116Q30KQ4 102 aa4.99□□□□□ -1.61
SSBP3-215ENST00000533946 PPDPFLQ8WWR9 84 aa4.99□□□□□ -1.61
SSBP3-215ENST00000533946 Q6Q795 121 aa4.98□□□□□ -1.61
SSBP3-215ENST00000533946 Q75L30 129 aa4.97□□□□□ -1.61
SSBP3-215ENST00000533946 TEN1Q86WV5 123 aa4.97□□□□□ -1.61
SSBP3-215ENST00000533946 HSD52Q0P140 79 aa4.96□□□□□ -1.62
SSBP3-215ENST00000533946 A8MUU9 505 aa4.95□□□□□ -1.62
SSBP3-215ENST00000533946 NAA38Q9BRA0 125 aaKnown RBP4.95□□□□□ -1.62
SSBP3-215ENST00000533946 PSMB2P49721 201 aa4.94□□□□□ -1.62
SSBP3-215ENST00000533946 COX6B2Q6YFQ2 88 aa4.94□□□□□ -1.62
SSBP3-215ENST00000533946 C20orf166-AS1Q96NR2 134 aa4.94□□□□□ -1.62
SSBP3-215ENST00000533946 CRCT1Q9UGL9 99 aa4.94□□□□□ -1.62
SSBP3-215ENST00000533946 TMEM238LA0A1B0GVL6 79 aa4.93□□□□□ -1.62
SSBP3-215ENST00000533946 A6NJY4 79 aa4.93□□□□□ -1.62
SSBP3-215ENST00000533946 A0A1B0GX51 115 aa4.92□□□□□ -1.62
SSBP3-215ENST00000533946 M0R2T5 61 aa4.92□□□□□ -1.62
SSBP3-215ENST00000533946 ATP11AUNQ6ZP68 121 aa4.92□□□□□ -1.62
SSBP3-215ENST00000533946 UQCR10Q9UDW1 63 aa4.92□□□□□ -1.62
SSBP3-215ENST00000533946 ANKRD29Q8N6D5 301 aa4.91□□□□□ -1.62
SSBP3-215ENST00000533946 SIGMAR1Q99720 223 aa4.91□□□□□ -1.62
SSBP3-215ENST00000533946 LINC00472Q9H8W2 130 aa4.91□□□□□ -1.62
SSBP3-215ENST00000533946 ORMDL1Q9P0S3 153 aa4.91□□□□□ -1.62
SSBP3-215ENST00000533946 IGKV4-1P06312 121 aa4.9□□□□□ -1.63
SSBP3-215ENST00000533946 CCKP06307 115 aa4.89□□□□□ -1.63
SSBP3-215ENST00000533946 SMCPP49901 116 aaPredicted RBP4.89□□□□□ -1.63
SSBP3-215ENST00000533946 SS18L2Q9UHA2 77 aa4.89□□□□□ -1.63
SSBP3-215ENST00000533946 KRTAP9-8Q9BYQ0 159 aa4.88□□□□□ -1.63
SSBP3-215ENST00000533946 TRBV7-4A0A0J9YYF1 115 aa4.87□□□□□ -1.63
SSBP3-215ENST00000533946 SNCGO76070 127 aa4.87□□□□□ -1.63
SSBP3-215ENST00000533946 DNAL4O96015 105 aa4.87□□□□□ -1.63
SSBP3-215ENST00000533946 VPS25Q9BRG1 176 aa4.87□□□□□ -1.63
SSBP3-215ENST00000533946 USH2AO75445 5202 aa4.86□□□□□ -1.63
SSBP3-215ENST00000533946 IGHV6-1A0A0B4J1U7 121 aa4.86□□□□□ -1.63
SSBP3-215ENST00000533946 LINC00313P59037 77 aa4.86□□□□□ -1.63
SSBP3-215ENST00000533946 SSPOA2VEC9 5147 aa4.85□□□□□ -1.63
SSBP3-215ENST00000533946 TMEM256-PLSCR3K7ERE1 68 aa4.85□□□□□ -1.63
SSBP3-215ENST00000533946 TRACP01848 142 aa4.85□□□□□ -1.63
SSBP3-215ENST00000533946 BAALC-AS2P0C853 105 aa4.85□□□□□ -1.63
SSBP3-215ENST00000533946 SCGB1C2P0DMR2 95 aa4.85□□□□□ -1.63
SSBP3-215ENST00000533946 HRES1P13985 223 aa4.85□□□□□ -1.63
SSBP3-215ENST00000533946 UBE2V1Q13404 147 aa4.85□□□□□ -1.63
SSBP3-215ENST00000533946 COX6CP09669 75 aa4.83□□□□□ -1.64
SSBP3-215ENST00000533946 MPLKIPQ8TAP9 179 aa4.82□□□□□ -1.64
SSBP3-215ENST00000533946 RBM3P98179 157 aaKnown RBP4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 135.4 ms