RNA–Protein interactions for RNA: ENST00000533705.5

UBQLN1-206, Transcript of ubiquilin 1, humanhuman

TSL 1 (best)

Gene UBQLN1, Length 6,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-206ENST00000533705 KLKP1Q107X0 134 aa4.03□□□□□ -1.77
UBQLN1-206ENST00000533705 KMT2BQ9UMN6 2715 aaPredicted RBP4.02□□□□□ -1.77
UBQLN1-206ENST00000533705 TEX15Q9BXT5 2789 aa4.02□□□□□ -1.77
UBQLN1-206ENST00000533705 A0A0D9SG42 100 aa4.01□□□□□ -1.77
UBQLN1-206ENST00000533705 FAM104AQ969W3 186 aa4.01□□□□□ -1.77
UBQLN1-206ENST00000533705 TRIOO75962 3097 aa4.01□□□□□ -1.77
UBQLN1-206ENST00000533705 AKAP13Q12802 2813 aa4□□□□□ -1.77
UBQLN1-206ENST00000533705 FAM229BQ4G0N7 80 aa4□□□□□ -1.77
UBQLN1-206ENST00000533705 SPENQ96T58 3664 aaKnown RBP4□□□□□ -1.77
UBQLN1-206ENST00000533705 COL6A5A8TX70 2615 aa3.99□□□□□ -1.77
UBQLN1-206ENST00000533705 PLAC8Q9NZF1 115 aa3.99□□□□□ -1.77
UBQLN1-206ENST00000533705 CR1P17927 2039 aa3.98□□□□□ -1.77
UBQLN1-206ENST00000533705 BSNQ9UPA5 3926 aa3.97□□□□□ -1.77
UBQLN1-206ENST00000533705 H7BZZ5 65 aa3.97□□□□□ -1.77
UBQLN1-206ENST00000533705 SPANXA2-OT1Q8N9U9 137 aa3.97□□□□□ -1.77
UBQLN1-206ENST00000533705 C5orf42Q9H799 3197 aa3.97□□□□□ -1.77
UBQLN1-206ENST00000533705 DNAH14Q0VDD8 3507 aa3.96□□□□□ -1.77
UBQLN1-206ENST00000533705 LCE6AA0A183 80 aa3.96□□□□□ -1.78
UBQLN1-206ENST00000533705 BAHCC1Q9P281 2608 aa3.96□□□□□ -1.78
UBQLN1-206ENST00000533705 CHD6Q8TD26 2715 aa3.96□□□□□ -1.78
UBQLN1-206ENST00000533705 Q5VSD8 79 aa3.96□□□□□ -1.78
UBQLN1-206ENST00000533705 CAMK2N1Q7Z7J9 78 aa3.95□□□□□ -1.78
UBQLN1-206ENST00000533705 FRYLO94915 3013 aa3.95□□□□□ -1.78
UBQLN1-206ENST00000533705 CDC42SE1Q9NRR8 79 aa3.94□□□□□ -1.78
UBQLN1-206ENST00000533705 FLG2Q5D862 2391 aaPredicted RBP3.93□□□□□ -1.78
UBQLN1-206ENST00000533705 NBEAL1Q6ZS30 2694 aa3.93□□□□□ -1.78
UBQLN1-206ENST00000533705 WDFY4Q6ZS81 3184 aa3.93□□□□□ -1.78
UBQLN1-206ENST00000533705 UNC79Q9P2D8 2635 aa3.93□□□□□ -1.78
UBQLN1-206ENST00000533705 KRTAP1-5Q9BYS1 174 aa3.92□□□□□ -1.78
UBQLN1-206ENST00000533705 NOTCH1P46531 2555 aa3.92□□□□□ -1.78
UBQLN1-206ENST00000533705 SPRR1AP35321 89 aa3.92□□□□□ -1.78
UBQLN1-206ENST00000533705 ZCCHC13Q8WW36 166 aaKnown RBP3.92□□□□□ -1.78
UBQLN1-206ENST00000533705 HRES1P13985 223 aa3.91□□□□□ -1.78
UBQLN1-206ENST00000533705 KRTAP10-1P60331 282 aa3.91□□□□□ -1.78
UBQLN1-206ENST00000533705 OCR1Q9BZK8 76 aa3.91□□□□□ -1.78
UBQLN1-206ENST00000533705 ZNF292O60281 2723 aa3.91□□□□□ -1.78
UBQLN1-206ENST00000533705 SEC61BP60468 96 aaKnown RBP3.91□□□□□ -1.78
UBQLN1-206ENST00000533705 CSAG1Q6PB30 78 aa3.91□□□□□ -1.78
UBQLN1-206ENST00000533705 KRTAP10-2P60368 255 aa3.9□□□□□ -1.78
UBQLN1-206ENST00000533705 MGAQ8IWI9 3026 aa3.9□□□□□ -1.79
UBQLN1-206ENST00000533705 DMXL1Q9Y485 3027 aa3.89□□□□□ -1.79
UBQLN1-206ENST00000533705 SPEGQ15772 3267 aa3.89□□□□□ -1.79
UBQLN1-206ENST00000533705 MMP24-AS1A0A0U1RRL7 71 aa3.89□□□□□ -1.79
UBQLN1-206ENST00000533705 SPRR1BP22528 89 aa3.89□□□□□ -1.79
UBQLN1-206ENST00000533705 Q8NDZ9 215 aa3.89□□□□□ -1.79
UBQLN1-206ENST00000533705 A0A1B0GU33 70 aa3.88□□□□□ -1.79
UBQLN1-206ENST00000533705 S4R3F8 94 aa3.87□□□□□ -1.79
UBQLN1-206ENST00000533705 Q8N9P0 234 aaPredicted RBP3.87□□□□□ -1.79
UBQLN1-206ENST00000533705 SPINK7P58062 85 aa3.86□□□□□ -1.79
UBQLN1-206ENST00000533705 ITPR1Q14643 2758 aa3.86□□□□□ -1.79
UBQLN1-206ENST00000533705 KRTAP26-1Q6PEX3 210 aa3.85□□□□□ -1.79
UBQLN1-206ENST00000533705 LINC00472Q9H8W2 130 aa3.85□□□□□ -1.79
UBQLN1-206ENST00000533705 Q1T7F1 81 aa3.84□□□□□ -1.79
UBQLN1-206ENST00000533705 GCN1Q92616 2671 aaKnown RBP3.84□□□□□ -1.79
UBQLN1-206ENST00000533705 Q5W150 140 aa3.84□□□□□ -1.79
UBQLN1-206ENST00000533705 DSPP15924 2871 aaKnown RBP3.84□□□□□ -1.79
UBQLN1-206ENST00000533705 IGSF10Q6WRI0 2623 aa3.84□□□□□ -1.8
UBQLN1-206ENST00000533705 ASPMQ8IZT6 3477 aa3.84□□□□□ -1.8
UBQLN1-206ENST00000533705 UBR5O95071 2799 aaPredicted RBP3.83□□□□□ -1.8
UBQLN1-206ENST00000533705 KTN1-AS1Q86SY8 53 aa3.83□□□□□ -1.8
UBQLN1-206ENST00000533705 DMBT1Q9UGM3 2413 aaPredicted RBP3.83□□□□□ -1.8
UBQLN1-206ENST00000533705 R4GN34 69 aa3.83□□□□□ -1.8
UBQLN1-206ENST00000533705 ZZEF1O43149 2961 aa3.83□□□□□ -1.8
UBQLN1-206ENST00000533705 LUZP6Q538Z0 58 aa3.83□□□□□ -1.8
UBQLN1-206ENST00000533705 LCA10Q71F78 164 aa3.83□□□□□ -1.8
UBQLN1-206ENST00000533705 STAB2Q8WWQ8 2551 aa3.83□□□□□ -1.8
UBQLN1-206ENST00000533705 VPS13AQ96RL7 3174 aa3.82□□□□□ -1.8
UBQLN1-206ENST00000533705 CFAP54Q96N23 3096 aa3.82□□□□□ -1.8
UBQLN1-206ENST00000533705 LINC00483Q53H64 154 aa3.82□□□□□ -1.8
UBQLN1-206ENST00000533705 MAP1AP78559 2803 aaPredicted RBP3.82□□□□□ -1.8
UBQLN1-206ENST00000533705 Q6ZR54 194 aa3.82□□□□□ -1.8
UBQLN1-206ENST00000533705 OXTP01178 125 aa3.81□□□□□ -1.8
UBQLN1-206ENST00000533705 DMAC1Q96GE9 116 aa3.81□□□□□ -1.8
UBQLN1-206ENST00000533705 FP248Q71RG6 208 aaPredicted RBP3.81□□□□□ -1.8
UBQLN1-206ENST00000533705 A0A0C4DFX4 3053 aa3.8□□□□□ -1.8
UBQLN1-206ENST00000533705 PANO1I0J062 215 aa3.8□□□□□ -1.8
UBQLN1-206ENST00000533705 NSD1Q96L73 2696 aaPredicted RBP3.79□□□□□ -1.8
UBQLN1-206ENST00000533705 NBEAQ8NFP9 2946 aa3.79□□□□□ -1.8
UBQLN1-206ENST00000533705 CFAP47Q6ZTR5 3102 aa3.79□□□□□ -1.8
UBQLN1-206ENST00000533705 LINC01558Q9Y6Z2 57 aa3.78□□□□□ -1.8
UBQLN1-206ENST00000533705 Q75L30 129 aa3.78□□□□□ -1.81
UBQLN1-206ENST00000533705 FRYQ5TBA9 3013 aa3.77□□□□□ -1.81
UBQLN1-206ENST00000533705 NBEAL2Q6ZNJ1 2754 aa3.77□□□□□ -1.81
UBQLN1-206ENST00000533705 LAMA1P25391 3075 aa3.77□□□□□ -1.81
UBQLN1-206ENST00000533705 ITPR2Q14571 2701 aa3.76□□□□□ -1.81
UBQLN1-206ENST00000533705 A0A087X002 238 aa3.75□□□□□ -1.81
UBQLN1-206ENST00000533705 M0QZ58 72 aa3.75□□□□□ -1.81
UBQLN1-206ENST00000533705 KRTAP4-16G5E9R7 235 aaPredicted RBP3.74□□□□□ -1.81
UBQLN1-206ENST00000533705 PLAC4Q8WY50 150 aa3.73□□□□□ -1.81
UBQLN1-206ENST00000533705 RPL37P61927 97 aaKnown RBP3.71□□□□□ -1.82
UBQLN1-206ENST00000533705 Q6ZRN7 208 aaPredicted RBP3.7□□□□□ -1.82
UBQLN1-206ENST00000533705 DMXL2Q8TDJ6 3036 aa3.7□□□□□ -1.82
UBQLN1-206ENST00000533705 LAMA5O15230 3695 aa3.7□□□□□ -1.82
UBQLN1-206ENST00000533705 KRTAP21-3Q3LHN1 58 aa3.7□□□□□ -1.82
UBQLN1-206ENST00000533705 ADM2Q7Z4H4 148 aa3.7□□□□□ -1.82
UBQLN1-206ENST00000533705 TENM4Q6N022 2769 aa3.69□□□□□ -1.82
UBQLN1-206ENST00000533705 ZFHX3Q15911 3703 aa3.69□□□□□ -1.82
UBQLN1-206ENST00000533705 SMG1Q96Q15 3661 aaKnown RBP3.69□□□□□ -1.82
UBQLN1-206ENST00000533705 TACC2O95359 2948 aa3.68□□□□□ -1.82
UBQLN1-206ENST00000533705 CYSTM1Q9H1C7 97 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms