RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 IGLV7-46A0A075B6I9 117 aa4.45□□□□□ -1.7
CTNND1-236ENST00000533667 SPENQ96T58 3664 aaKnown RBP4.45□□□□□ -1.7
CTNND1-236ENST00000533667 KRTAP1-1Q07627 177 aa4.44□□□□□ -1.7
CTNND1-236ENST00000533667 COX6B2Q6YFQ2 88 aa4.44□□□□□ -1.7
CTNND1-236ENST00000533667 C9orf92A6NGG3 77 aa4.44□□□□□ -1.7
CTNND1-236ENST00000533667 A6NN06 94 aa4.44□□□□□ -1.7
CTNND1-236ENST00000533667 A0A087X002 238 aa4.44□□□□□ -1.7
CTNND1-236ENST00000533667 ANAPC11Q9NYG5 84 aa4.43□□□□□ -1.7
CTNND1-236ENST00000533667 WDFY4Q6ZS81 3184 aa4.43□□□□□ -1.7
CTNND1-236ENST00000533667 SPEGQ15772 3267 aa4.42□□□□□ -1.7
CTNND1-236ENST00000533667 FRYLO94915 3013 aa4.42□□□□□ -1.7
CTNND1-236ENST00000533667 SPRR1AP35321 89 aa4.4□□□□□ -1.71
CTNND1-236ENST00000533667 CAMK2N1Q7Z7J9 78 aa4.4□□□□□ -1.71
CTNND1-236ENST00000533667 LAMA1P25391 3075 aa4.39□□□□□ -1.71
CTNND1-236ENST00000533667 CFAP54Q96N23 3096 aa4.39□□□□□ -1.71
CTNND1-236ENST00000533667 Q8N1X5 172 aa4.38□□□□□ -1.71
CTNND1-236ENST00000533667 VPS13AQ96RL7 3174 aa4.38□□□□□ -1.71
CTNND1-236ENST00000533667 SMR3BP02814 79 aaPredicted RBP4.37□□□□□ -1.71
CTNND1-236ENST00000533667 EPG5Q9HCE0 2579 aa4.37□□□□□ -1.71
CTNND1-236ENST00000533667 SPRR1BP22528 89 aa4.37□□□□□ -1.71
CTNND1-236ENST00000533667 ZFHX4Q86UP3 3567 aa4.37□□□□□ -1.71
CTNND1-236ENST00000533667 ASPMQ8IZT6 3477 aa4.37□□□□□ -1.71
CTNND1-236ENST00000533667 SPINK7P58062 85 aa4.36□□□□□ -1.71
CTNND1-236ENST00000533667 MMP24-AS1A0A0U1RRL7 71 aa4.36□□□□□ -1.71
CTNND1-236ENST00000533667 HRES1P13985 223 aa4.36□□□□□ -1.71
CTNND1-236ENST00000533667 PLAC8Q9NZF1 115 aa4.35□□□□□ -1.71
CTNND1-236ENST00000533667 CR1P17927 2039 aa4.35□□□□□ -1.71
CTNND1-236ENST00000533667 A0A1B0GU33 70 aa4.34□□□□□ -1.71
CTNND1-236ENST00000533667 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.34□□□□□ -1.71
CTNND1-236ENST00000533667 A0A0D9SG42 100 aa4.33□□□□□ -1.72
CTNND1-236ENST00000533667 TNP2Q05952 138 aa4.33□□□□□ -1.72
CTNND1-236ENST00000533667 ZCCHC13Q8WW36 166 aaKnown RBP4.32□□□□□ -1.72
CTNND1-236ENST00000533667 LINC00472Q9H8W2 130 aa4.32□□□□□ -1.72
CTNND1-236ENST00000533667 Q6ZSA8 131 aa4.31□□□□□ -1.72
CTNND1-236ENST00000533667 DCHS1Q96JQ0 3298 aa4.31□□□□□ -1.72
CTNND1-236ENST00000533667 Q8NDZ9 215 aa4.31□□□□□ -1.72
CTNND1-236ENST00000533667 USP24Q9UPU5 2620 aa4.3□□□□□ -1.72
CTNND1-236ENST00000533667 BSNQ9UPA5 3926 aa4.3□□□□□ -1.72
CTNND1-236ENST00000533667 MGAM2Q2M2H8 2515 aa4.3□□□□□ -1.72
CTNND1-236ENST00000533667 ROMO1P60602 79 aa4.28□□□□□ -1.72
CTNND1-236ENST00000533667 KRTAP25-1Q3LHN0 102 aa4.28□□□□□ -1.72
CTNND1-236ENST00000533667 Q5W150 140 aa4.27□□□□□ -1.73
CTNND1-236ENST00000533667 HECTD1Q9ULT8 2610 aa4.27□□□□□ -1.73
CTNND1-236ENST00000533667 SPATA8Q6RVD6 105 aa4.27□□□□□ -1.73
CTNND1-236ENST00000533667 FLNAP21333 2647 aaKnown RBP4.26□□□□□ -1.73
CTNND1-236ENST00000533667 KRTAP26-1Q6PEX3 210 aa4.26□□□□□ -1.73
CTNND1-236ENST00000533667 FLNBO75369 2602 aaKnown RBP4.26□□□□□ -1.73
CTNND1-236ENST00000533667 CFAP47Q6ZTR5 3102 aa4.26□□□□□ -1.73
CTNND1-236ENST00000533667 A0A0C4DFX4 3053 aa4.25□□□□□ -1.73
CTNND1-236ENST00000533667 LINC00483Q53H64 154 aa4.25□□□□□ -1.73
CTNND1-236ENST00000533667 PRRC2CQ9Y520 2896 aaKnown RBP4.25□□□□□ -1.73
CTNND1-236ENST00000533667 KRTAP21-3Q3LHN1 58 aa4.24□□□□□ -1.73
CTNND1-236ENST00000533667 S4R3F8 94 aa4.24□□□□□ -1.73
CTNND1-236ENST00000533667 FREM2Q5SZK8 3169 aa4.23□□□□□ -1.73
CTNND1-236ENST00000533667 NOTCH2NLQ7Z3S9 236 aa4.23□□□□□ -1.73
CTNND1-236ENST00000533667 DMXL1Q9Y485 3027 aa4.23□□□□□ -1.73
CTNND1-236ENST00000533667 ITPR3Q14573 2671 aa4.22□□□□□ -1.73
CTNND1-236ENST00000533667 NDUFAF8A1L188 74 aa4.22□□□□□ -1.73
CTNND1-236ENST00000533667 LAMA5O15230 3695 aa4.22□□□□□ -1.73
CTNND1-236ENST00000533667 Q6ZR54 194 aa4.21□□□□□ -1.74
CTNND1-236ENST00000533667 ATRQ13535 2644 aa4.21□□□□□ -1.74
CTNND1-236ENST00000533667 KRTAP4-16G5E9R7 235 aaPredicted RBP4.2□□□□□ -1.74
CTNND1-236ENST00000533667 KRTAP1-5Q9BYS1 174 aa4.19□□□□□ -1.74
CTNND1-236ENST00000533667 FRYQ5TBA9 3013 aa4.19□□□□□ -1.74
CTNND1-236ENST00000533667 KRTAP29-1A8MX34 341 aaPredicted RBP4.17□□□□□ -1.74
CTNND1-236ENST00000533667 LCE6AA0A183 80 aa4.17□□□□□ -1.74
CTNND1-236ENST00000533667 HELZ2Q9BYK8 2649 aaKnown RBP4.17□□□□□ -1.74
CTNND1-236ENST00000533667 RPL37P61927 97 aaKnown RBP4.17□□□□□ -1.74
CTNND1-236ENST00000533667 MAST4O15021 2626 aa4.16□□□□□ -1.74
CTNND1-236ENST00000533667 R4GN34 69 aa4.15□□□□□ -1.74
CTNND1-236ENST00000533667 ADM2Q7Z4H4 148 aa4.15□□□□□ -1.74
CTNND1-236ENST00000533667 C20orf166-AS1Q96NR2 134 aa4.14□□□□□ -1.75
CTNND1-236ENST00000533667 H1FX-AS1Q4G0G2 97 aa4.14□□□□□ -1.75
CTNND1-236ENST00000533667 CELSR3Q9NYQ7 3312 aa4.13□□□□□ -1.75
CTNND1-236ENST00000533667 M0R2T5 61 aa4.13□□□□□ -1.75
CTNND1-236ENST00000533667 LOC400499M0QZD8 3231 aa4.13□□□□□ -1.75
CTNND1-236ENST00000533667 KRTAP10-1P60331 282 aa4.12□□□□□ -1.75
CTNND1-236ENST00000533667 CFAP46Q8IYW2 2715 aa4.1□□□□□ -1.75
CTNND1-236ENST00000533667 A8MU10 97 aa4.1□□□□□ -1.75
CTNND1-236ENST00000533667 RPS29P62273 56 aaKnown RBP4.1□□□□□ -1.75
CTNND1-236ENST00000533667 Q5VSD8 79 aa4.1□□□□□ -1.75
CTNND1-236ENST00000533667 KRTAP10-2P60368 255 aa4.09□□□□□ -1.76
CTNND1-236ENST00000533667 STAB1Q9NY15 2570 aa4.09□□□□□ -1.76
CTNND1-236ENST00000533667 PANO1I0J062 215 aa4.06□□□□□ -1.76
CTNND1-236ENST00000533667 M0QZ58 72 aa4.06□□□□□ -1.76
CTNND1-236ENST00000533667 A8MUU9 505 aa4.06□□□□□ -1.76
CTNND1-236ENST00000533667 SMG1Q96Q15 3661 aaKnown RBP4.05□□□□□ -1.76
CTNND1-236ENST00000533667 NBEAL1Q6ZS30 2694 aa4.04□□□□□ -1.76
CTNND1-236ENST00000533667 NBEAQ8NFP9 2946 aa4.03□□□□□ -1.76
CTNND1-236ENST00000533667 AKAP13Q12802 2813 aa4.03□□□□□ -1.76
CTNND1-236ENST00000533667 ZZEF1O43149 2961 aa4.03□□□□□ -1.76
CTNND1-236ENST00000533667 CHD6Q8TD26 2715 aa4.03□□□□□ -1.76
CTNND1-236ENST00000533667 ZFHX3Q15911 3703 aa4.03□□□□□ -1.76
CTNND1-236ENST00000533667 CENPEQ02224 2701 aa4.02□□□□□ -1.77
CTNND1-236ENST00000533667 Q6ZRN7 208 aaPredicted RBP4.02□□□□□ -1.77
CTNND1-236ENST00000533667 ZNF292O60281 2723 aa4.01□□□□□ -1.77
CTNND1-236ENST00000533667 FLG2Q5D862 2391 aaPredicted RBP4.01□□□□□ -1.77
CTNND1-236ENST00000533667 UNC79Q9P2D8 2635 aa4□□□□□ -1.77
CTNND1-236ENST00000533667 KRTAP13-1Q8IUC0 172 aa4□□□□□ -1.77
CTNND1-236ENST00000533667 ATMQ13315 3056 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms