RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 TSTD3H0UI37 97 aa6.84□□□□□ -1.31
SSBP3-214ENST00000533209 RPS29P62273 56 aaKnown RBP6.84□□□□□ -1.31
SSBP3-214ENST00000533209 M0R143 59 aa6.83□□□□□ -1.32
SSBP3-214ENST00000533209 PSMB2P49721 201 aa6.83□□□□□ -1.32
SSBP3-214ENST00000533209 A0A1B0GX51 115 aa6.82□□□□□ -1.32
SSBP3-214ENST00000533209 SNCGO76070 127 aa6.82□□□□□ -1.32
SSBP3-214ENST00000533209 PPDPFLQ8WWR9 84 aa6.82□□□□□ -1.32
SSBP3-214ENST00000533209 CLEC2BQ92478 149 aa6.82□□□□□ -1.32
SSBP3-214ENST00000533209 LPAP08519 4548 aa6.82□□□□□ -1.32
SSBP3-214ENST00000533209 OCIAD2Q56VL3 154 aa6.81□□□□□ -1.32
SSBP3-214ENST00000533209 IGLV8-61A0A075B6I0 122 aa6.8□□□□□ -1.32
SSBP3-214ENST00000533209 A0A0G2JQZ4 141 aa6.8□□□□□ -1.32
SSBP3-214ENST00000533209 F8WEM9 126 aa6.8□□□□□ -1.32
SSBP3-214ENST00000533209 COX6CP09669 75 aa6.8□□□□□ -1.32
SSBP3-214ENST00000533209 HRCT1Q6UXD1 115 aa6.8□□□□□ -1.32
SSBP3-214ENST00000533209 UBR4Q5T4S7 5183 aa6.79□□□□□ -1.32
SSBP3-214ENST00000533209 CD164Q04900 197 aa6.79□□□□□ -1.32
SSBP3-214ENST00000533209 SNHG12Q9BXW3 62 aa6.79□□□□□ -1.32
SSBP3-214ENST00000533209 IGLV7-46A0A075B6I9 117 aa6.77□□□□□ -1.33
SSBP3-214ENST00000533209 FP248Q71RG6 208 aaPredicted RBP6.77□□□□□ -1.33
SSBP3-214ENST00000533209 Q6JHZ5 121 aa6.76□□□□□ -1.33
SSBP3-214ENST00000533209 SCGB1C2P0DMR2 95 aa6.75□□□□□ -1.33
SSBP3-214ENST00000533209 NDUFV3P56181 108 aaKnown RBP6.75□□□□□ -1.33
SSBP3-214ENST00000533209 IGFL1Q6UW32 110 aa6.75□□□□□ -1.33
SSBP3-214ENST00000533209 LIMD2Q9BT23 127 aa6.75□□□□□ -1.33
SSBP3-214ENST00000533209 H3BUT2 72 aa6.74□□□□□ -1.33
SSBP3-214ENST00000533209 LST1O00453 97 aa6.74□□□□□ -1.33
SSBP3-214ENST00000533209 DNAL4O96015 105 aa6.74□□□□□ -1.33
SSBP3-214ENST00000533209 GHRHP01286 108 aa6.74□□□□□ -1.33
SSBP3-214ENST00000533209 TRACP01848 142 aa6.74□□□□□ -1.33
SSBP3-214ENST00000533209 BATFQ16520 125 aa6.74□□□□□ -1.33
SSBP3-214ENST00000533209 NAA38Q9BRA0 125 aaKnown RBP6.74□□□□□ -1.33
SSBP3-214ENST00000533209 FABP2P12104 132 aa6.73□□□□□ -1.33
SSBP3-214ENST00000533209 TPRXLQ17RH7 258 aa6.73□□□□□ -1.33
SSBP3-214ENST00000533209 Q5XG85 94 aa6.73□□□□□ -1.33
SSBP3-214ENST00000533209 ORMDL1Q9P0S3 153 aa6.73□□□□□ -1.33
SSBP3-214ENST00000533209 H3BQ85 93 aa6.71□□□□□ -1.34
SSBP3-214ENST00000533209 H3BMG7 143 aa6.7□□□□□ -1.34
SSBP3-214ENST00000533209 TRBV7-7A0A0K0K1E9 115 aa6.69□□□□□ -1.34
SSBP3-214ENST00000533209 TMEM256-PLSCR3K7ERE1 68 aa6.69□□□□□ -1.34
SSBP3-214ENST00000533209 TCL1BO95988 128 aa6.69□□□□□ -1.34
SSBP3-214ENST00000533209 KRTAP13-3Q3SY46 172 aa6.69□□□□□ -1.34
SSBP3-214ENST00000533209 C1orf195Q5TG92 126 aa6.68□□□□□ -1.34
SSBP3-214ENST00000533209 Q6Q795 121 aa6.67□□□□□ -1.34
SSBP3-214ENST00000533209 CDIP1Q9H305 208 aa6.67□□□□□ -1.34
SSBP3-214ENST00000533209 TAX1BP3O14907 124 aa6.66□□□□□ -1.34
SSBP3-214ENST00000533209 UBE2V1Q13404 147 aa6.66□□□□□ -1.34
SSBP3-214ENST00000533209 ATXN8Q156A1 80 aa6.66□□□□□ -1.34
SSBP3-214ENST00000533209 C9orf118A6NHY6 69 aa6.65□□□□□ -1.34
SSBP3-214ENST00000533209 BAALC-AS2P0C853 105 aa6.65□□□□□ -1.34
SSBP3-214ENST00000533209 ASB16-AS1Q495Z4 193 aa6.65□□□□□ -1.34
SSBP3-214ENST00000533209 TEN1Q86WV5 123 aa6.65□□□□□ -1.34
SSBP3-214ENST00000533209 A0A1B0GV72 72 aa6.64□□□□□ -1.35
SSBP3-214ENST00000533209 LYRM7Q5U5X0 104 aa6.64□□□□□ -1.35
SSBP3-214ENST00000533209 A0A1W2PNM2 257 aa6.63□□□□□ -1.35
SSBP3-214ENST00000533209 ANKRD29Q8N6D5 301 aa6.63□□□□□ -1.35
SSBP3-214ENST00000533209 TRBV20-1A0A075B6N2 111 aa6.62□□□□□ -1.35
SSBP3-214ENST00000533209 RNF213Q63HN8 5207 aa6.61□□□□□ -1.35
SSBP3-214ENST00000533209 A0A1W2PPM0 123 aa6.61□□□□□ -1.35
SSBP3-214ENST00000533209 TRBV7-4A0A0J9YYF1 115 aa6.6□□□□□ -1.35
SSBP3-214ENST00000533209 A0A087WSZ3 146 aa6.59□□□□□ -1.35
SSBP3-214ENST00000533209 SS18L2Q9UHA2 77 aa6.59□□□□□ -1.35
SSBP3-214ENST00000533209 C9JAW5 83 aa6.58□□□□□ -1.36
SSBP3-214ENST00000533209 RBM3P98179 157 aaKnown RBP6.58□□□□□ -1.36
SSBP3-214ENST00000533209 COL5A1-AS1Q5SY13 56 aa6.58□□□□□ -1.36
SSBP3-214ENST00000533209 XP32Q5T750 250 aa6.58□□□□□ -1.36
SSBP3-214ENST00000533209 C9orf92A6NGG3 77 aa6.57□□□□□ -1.36
SSBP3-214ENST00000533209 PCP4L1A6NKN8 68 aa6.57□□□□□ -1.36
SSBP3-214ENST00000533209 CCKP06307 115 aa6.57□□□□□ -1.36
SSBP3-214ENST00000533209 MUC17Q685J3 4493 aa6.56□□□□□ -1.36
SSBP3-214ENST00000533209 Q96NJ1 140 aa6.55□□□□□ -1.36
SSBP3-214ENST00000533209 DSCR8Q96T75 97 aa6.55□□□□□ -1.36
SSBP3-214ENST00000533209 JMJD7-PLA2G4BH0Y9G9 81 aa6.54□□□□□ -1.36
SSBP3-214ENST00000533209 OBSCN-AS1Q96MR7 158 aa6.53□□□□□ -1.36
SSBP3-214ENST00000533209 VPS25Q9BRG1 176 aa6.53□□□□□ -1.36
SSBP3-214ENST00000533209 SPCS1Q9Y6A9 102 aa6.53□□□□□ -1.36
SSBP3-214ENST00000533209 H3BT86 120 aa6.52□□□□□ -1.37
SSBP3-214ENST00000533209 MTURNQ8N3F0 131 aa6.52□□□□□ -1.37
SSBP3-214ENST00000533209 LOC110117498A0A087WWA1 95 aa6.51□□□□□ -1.37
SSBP3-214ENST00000533209 Q6ZQT0 140 aa6.51□□□□□ -1.37
SSBP3-214ENST00000533209 SEC61BP60468 96 aaKnown RBP6.5□□□□□ -1.37
SSBP3-214ENST00000533209 C14orf132Q9NPU4 83 aa6.5□□□□□ -1.37
SSBP3-214ENST00000533209 LINC00472Q9H8W2 130 aa6.49□□□□□ -1.37
SSBP3-214ENST00000533209 MUC2Q02817 5179 aa6.49□□□□□ -1.37
SSBP3-214ENST00000533209 PDE6GP18545 87 aa6.48□□□□□ -1.37
SSBP3-214ENST00000533209 K7EP34 96 aa6.47□□□□□ -1.37
SSBP3-214ENST00000533209 SMCPP49901 116 aaPredicted RBP6.47□□□□□ -1.37
SSBP3-214ENST00000533209 IGKV4-1P06312 121 aa6.46□□□□□ -1.38
SSBP3-214ENST00000533209 C21orf62-AS1Q17RA5 79 aa6.46□□□□□ -1.38
SSBP3-214ENST00000533209 DEFB116Q30KQ4 102 aa6.46□□□□□ -1.38
SSBP3-214ENST00000533209 SIGMAR1Q99720 223 aa6.46□□□□□ -1.38
SSBP3-214ENST00000533209 A0A1B0GW54 56 aa6.45□□□□□ -1.38
SSBP3-214ENST00000533209 KRTAP4-1Q9BYQ7 146 aa6.45□□□□□ -1.38
SSBP3-214ENST00000533209 PRO0461Q9UI25 63 aa6.45□□□□□ -1.38
SSBP3-214ENST00000533209 RPL37P61927 97 aaKnown RBP6.44□□□□□ -1.38
SSBP3-214ENST00000533209 PCOTHQ58A44 107 aa6.44□□□□□ -1.38
SSBP3-214ENST00000533209 DSCR10P59022 87 aa6.41□□□□□ -1.38
SSBP3-214ENST00000533209 GTF2H5Q6ZYL4 71 aa6.4□□□□□ -1.38
SSBP3-214ENST00000533209 Q75L30 129 aa6.39□□□□□ -1.39
SSBP3-214ENST00000533209 NOTCH2NLQ7Z3S9 236 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms