RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 F8WEM9 126 aa16.67■□□□□ 0.26
SSSCA1-207ENST00000533115 CFC1BP0CG36 223 aa16.64■□□□□ 0.25
SSSCA1-207ENST00000533115 CFC1P0CG37 223 aa16.64■□□□□ 0.25
SSSCA1-207ENST00000533115 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP16.62■□□□□ 0.25
SSSCA1-207ENST00000533115 LCE2AQ5TA79 106 aaPredicted RBP16.61■□□□□ 0.25
SSSCA1-207ENST00000533115 C2orf91Q6ZV80 131 aa16.61■□□□□ 0.25
SSSCA1-207ENST00000533115 RAB37Q96AX2 223 aa16.61■□□□□ 0.25
SSSCA1-207ENST00000533115 C1orf195Q5TG92 126 aa16.59■□□□□ 0.25
SSSCA1-207ENST00000533115 KRTAP4-1Q9BYQ7 146 aa16.59■□□□□ 0.25
SSSCA1-207ENST00000533115 C9orf92A6NGG3 77 aa16.58■□□□□ 0.24
SSSCA1-207ENST00000533115 A0A0B4J2C4 111 aa16.57■□□□□ 0.24
SSSCA1-207ENST00000533115 IGLV8-61A0A075B6I0 122 aa16.56■□□□□ 0.24
SSSCA1-207ENST00000533115 Q6JHZ5 121 aa16.56■□□□□ 0.24
SSSCA1-207ENST00000533115 PPDPFLQ8WWR9 84 aa16.55■□□□□ 0.24
SSSCA1-207ENST00000533115 TCL1BO95988 128 aa16.54■□□□□ 0.24
SSSCA1-207ENST00000533115 OCIAD2Q56VL3 154 aa16.53■□□□□ 0.24
SSSCA1-207ENST00000533115 CEND1Q8N111 149 aa16.52■□□□□ 0.24
SSSCA1-207ENST00000533115 CLEC2BQ92478 149 aa16.51■□□□□ 0.23
SSSCA1-207ENST00000533115 IGFL1Q6UW32 110 aa16.5■□□□□ 0.23
SSSCA1-207ENST00000533115 SNHG12Q9BXW3 62 aa16.49■□□□□ 0.23
SSSCA1-207ENST00000533115 H0YGX0 51 aa16.48■□□□□ 0.23
SSSCA1-207ENST00000533115 SNCGO76070 127 aa16.46■□□□□ 0.23
SSSCA1-207ENST00000533115 TMEM238LA0A1B0GVL6 79 aa16.45■□□□□ 0.22
SSSCA1-207ENST00000533115 A6NJY4 79 aa16.45■□□□□ 0.22
SSSCA1-207ENST00000533115 PYY3Q5JQD4 70 aa16.44■□□□□ 0.22
SSSCA1-207ENST00000533115 TRBV7-7A0A0K0K1E9 115 aa16.43■□□□□ 0.22
SSSCA1-207ENST00000533115 FAM218AQ96MZ4 157 aa16.43■□□□□ 0.22
SSSCA1-207ENST00000533115 PRO1854Q9UHT4 67 aa16.43■□□□□ 0.22
SSSCA1-207ENST00000533115 FXYD2P54710 66 aa16.41■□□□□ 0.22
SSSCA1-207ENST00000533115 PCOTHQ58A44 107 aa16.4■□□□□ 0.22
SSSCA1-207ENST00000533115 H3BUT2 72 aa16.39■□□□□ 0.21
SSSCA1-207ENST00000533115 A0A1B0GX51 115 aa16.33■□□□□ 0.2
SSSCA1-207ENST00000533115 TMA7Q9Y2S6 64 aaKnown RBP16.32■□□□□ 0.2
SSSCA1-207ENST00000533115 HSD52Q0P140 79 aa16.31■□□□□ 0.2
SSSCA1-207ENST00000533115 NDUFV3P56181 108 aaKnown RBP16.3■□□□□ 0.2
SSSCA1-207ENST00000533115 TRIAP1O43715 76 aa16.29■□□□□ 0.2
SSSCA1-207ENST00000533115 GHRHP01286 108 aa16.27■□□□□ 0.2
SSSCA1-207ENST00000533115 RPL37P61927 97 aaKnown RBP16.26■□□□□ 0.19
SSSCA1-207ENST00000533115 Q6Q795 121 aa16.25■□□□□ 0.19
SSSCA1-207ENST00000533115 LST1O00453 97 aa16.22■□□□□ 0.19
SSSCA1-207ENST00000533115 FABP2P12104 132 aa16.22■□□□□ 0.19
SSSCA1-207ENST00000533115 K7ERJ3 54 aa16.21■□□□□ 0.19
SSSCA1-207ENST00000533115 TEN1Q86WV5 123 aa16.21■□□□□ 0.19
SSSCA1-207ENST00000533115 UQCR10Q9UDW1 63 aa16.21■□□□□ 0.19
SSSCA1-207ENST00000533115 H3BMG7 143 aa16.2■□□□□ 0.18
SSSCA1-207ENST00000533115 SS18L2Q9UHA2 77 aa16.19■□□□□ 0.18
SSSCA1-207ENST00000533115 PSMB2P49721 201 aa16.18■□□□□ 0.18
SSSCA1-207ENST00000533115 LCE2CQ5TA81 110 aa16.15■□□□□ 0.18
SSSCA1-207ENST00000533115 DNAL4O96015 105 aa16.14■□□□□ 0.17
SSSCA1-207ENST00000533115 KRTAP9-2Q9BYQ4 174 aa16.14■□□□□ 0.17
SSSCA1-207ENST00000533115 KRTAP19-2Q3LHN2 52 aa16.13■□□□□ 0.17
SSSCA1-207ENST00000533115 COX6CP09669 75 aa16.12■□□□□ 0.17
SSSCA1-207ENST00000533115 OBSCN-AS1Q96MR7 158 aa16.11■□□□□ 0.17
SSSCA1-207ENST00000533115 ORMDL1Q9P0S3 153 aa16.11■□□□□ 0.17
SSSCA1-207ENST00000533115 A0A087WSZ3 146 aa16.1■□□□□ 0.17
SSSCA1-207ENST00000533115 H3BQ85 93 aa16.08■□□□□ 0.16
SSSCA1-207ENST00000533115 A0A1W2PNM2 257 aa16.04■□□□□ 0.16
SSSCA1-207ENST00000533115 TMEM256-PLSCR3K7ERE1 68 aa16.02■□□□□ 0.16
SSSCA1-207ENST00000533115 Q75L30 129 aa16.01■□□□□ 0.15
SSSCA1-207ENST00000533115 ANKRD29Q8N6D5 301 aa16.01■□□□□ 0.15
SSSCA1-207ENST00000533115 Q96NJ1 140 aa16■□□□□ 0.15
SSSCA1-207ENST00000533115 A0A1B0GV72 72 aa15.98■□□□□ 0.15
SSSCA1-207ENST00000533115 ATP11AUNQ6ZP68 121 aa15.96■□□□□ 0.15
SSSCA1-207ENST00000533115 TRBV7-4A0A0J9YYF1 115 aa15.94■□□□□ 0.14
SSSCA1-207ENST00000533115 TRACP01848 142 aa15.94■□□□□ 0.14
SSSCA1-207ENST00000533115 SCGB1C2P0DMR2 95 aa15.94■□□□□ 0.14
SSSCA1-207ENST00000533115 MT1HP80294 61 aa15.94■□□□□ 0.14
SSSCA1-207ENST00000533115 UBE2V1Q13404 147 aa15.92■□□□□ 0.14
SSSCA1-207ENST00000533115 CCKP06307 115 aa15.86■□□□□ 0.13
SSSCA1-207ENST00000533115 C20orf166-AS1Q96NR2 134 aa15.86■□□□□ 0.13
SSSCA1-207ENST00000533115 SIGMAR1Q99720 223 aa15.86■□□□□ 0.13
SSSCA1-207ENST00000533115 A8MUU9 505 aa15.82■□□□□ 0.12
SSSCA1-207ENST00000533115 DSCR10P59022 87 aa15.82■□□□□ 0.12
SSSCA1-207ENST00000533115 COX6B2Q6YFQ2 88 aa15.82■□□□□ 0.12
SSSCA1-207ENST00000533115 IGKV4-1P06312 121 aa15.81■□□□□ 0.12
SSSCA1-207ENST00000533115 M0R143 59 aa15.79■□□□□ 0.12
SSSCA1-207ENST00000533115 RBM3P98179 157 aaKnown RBP15.78■□□□□ 0.12
SSSCA1-207ENST00000533115 LINC00472Q9H8W2 130 aa15.76■□□□□ 0.11
SSSCA1-207ENST00000533115 BAALC-AS2P0C853 105 aa15.75■□□□□ 0.11
SSSCA1-207ENST00000533115 SMIM6P0DI80 62 aa15.74■□□□□ 0.11
SSSCA1-207ENST00000533115 LINC00313P59037 77 aa15.74■□□□□ 0.11
SSSCA1-207ENST00000533115 DEFB116Q30KQ4 102 aa15.73■□□□□ 0.11
SSSCA1-207ENST00000533115 DSCR8Q96T75 97 aa15.73■□□□□ 0.11
SSSCA1-207ENST00000533115 VPS25Q9BRG1 176 aa15.73■□□□□ 0.11
SSSCA1-207ENST00000533115 LCE2DQ5TA82 110 aaPredicted RBP15.71■□□□□ 0.11
SSSCA1-207ENST00000533115 FLGP20930 4061 aaPredicted RBP15.71■□□□□ 0.11
SSSCA1-207ENST00000533115 NAA38Q9BRA0 125 aaKnown RBP15.69■□□□□ 0.1
SSSCA1-207ENST00000533115 M0R2T5 61 aa15.67■□□□□ 0.1
SSSCA1-207ENST00000533115 ATXN8Q156A1 80 aa15.67■□□□□ 0.1
SSSCA1-207ENST00000533115 KRTAP16-1A8MUX0 517 aa15.65■□□□□ 0.1
SSSCA1-207ENST00000533115 C9JAW5 83 aa15.64■□□□□ 0.09
SSSCA1-207ENST00000533115 KRTAP10-6P60371 365 aaPredicted RBP15.63■□□□□ 0.09
SSSCA1-207ENST00000533115 NOTCH2NLQ7Z3S9 236 aa15.63■□□□□ 0.09
SSSCA1-207ENST00000533115 LORP23490 312 aaPredicted RBP15.62■□□□□ 0.09
SSSCA1-207ENST00000533115 IGHV6-1A0A0B4J1U7 121 aa15.61■□□□□ 0.09
SSSCA1-207ENST00000533115 C21orf62-AS1Q17RA5 79 aa15.59■□□□□ 0.09
SSSCA1-207ENST00000533115 KRTAP9-6A0A140TA67 174 aa15.58■□□□□ 0.08
SSSCA1-207ENST00000533115 TSTD3H0UI37 97 aa15.55■□□□□ 0.08
SSSCA1-207ENST00000533115 JMJD7-PLA2G4BH0Y9G9 81 aa15.55■□□□□ 0.08
SSSCA1-207ENST00000533115 Q6ZQT0 140 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms