RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.56□□□□□ -1.2
TRAPPC4-212ENST00000533058 CLEC2BQ92478 149 aa7.56□□□□□ -1.2
TRAPPC4-212ENST00000533058 FAM218AQ96MZ4 157 aa7.56□□□□□ -1.2
TRAPPC4-212ENST00000533058 PCP4L1A6NKN8 68 aa7.55□□□□□ -1.2
TRAPPC4-212ENST00000533058 SPRR1BP22528 89 aa7.55□□□□□ -1.2
TRAPPC4-212ENST00000533058 NAA38Q9BRA0 125 aaKnown RBP7.54□□□□□ -1.2
TRAPPC4-212ENST00000533058 IGLV5-48A0A075B6I7 105 aa7.53□□□□□ -1.2
TRAPPC4-212ENST00000533058 A0A1B0GX51 115 aa7.53□□□□□ -1.2
TRAPPC4-212ENST00000533058 DNAL4O96015 105 aa7.53□□□□□ -1.2
TRAPPC4-212ENST00000533058 Q8N377 158 aa7.53□□□□□ -1.2
TRAPPC4-212ENST00000533058 LINC00304Q8N9R0 145 aa7.53□□□□□ -1.2
TRAPPC4-212ENST00000533058 Q8NBF4 154 aa7.53□□□□□ -1.2
TRAPPC4-212ENST00000533058 F8WEM9 126 aa7.52□□□□□ -1.21
TRAPPC4-212ENST00000533058 LINC01547P58512 204 aaPredicted RBP7.52□□□□□ -1.21
TRAPPC4-212ENST00000533058 OCIAD2Q56VL3 154 aa7.51□□□□□ -1.21
TRAPPC4-212ENST00000533058 SSBP3-AS1Q7Z2R9 100 aa7.51□□□□□ -1.21
TRAPPC4-212ENST00000533058 SNHG12Q9BXW3 62 aa7.51□□□□□ -1.21
TRAPPC4-212ENST00000533058 RNF213Q63HN8 5207 aa7.51□□□□□ -1.21
TRAPPC4-212ENST00000533058 PRR4Q16378 134 aa7.5□□□□□ -1.21
TRAPPC4-212ENST00000533058 LYRM7Q5U5X0 104 aa7.49□□□□□ -1.21
TRAPPC4-212ENST00000533058 SMIM29Q86T20 159 aa7.49□□□□□ -1.21
TRAPPC4-212ENST00000533058 H3BUT2 72 aa7.48□□□□□ -1.21
TRAPPC4-212ENST00000533058 FABP2P12104 132 aa7.48□□□□□ -1.21
TRAPPC4-212ENST00000533058 PPDPFLQ8WWR9 84 aa7.48□□□□□ -1.21
TRAPPC4-212ENST00000533058 SPAG11AQ6PDA7 123 aa7.47□□□□□ -1.21
TRAPPC4-212ENST00000533058 ORMDL1Q9P0S3 153 aa7.47□□□□□ -1.21
TRAPPC4-212ENST00000533058 LPAP08519 4548 aa7.47□□□□□ -1.21
TRAPPC4-212ENST00000533058 LST1O00453 97 aa7.46□□□□□ -1.22
TRAPPC4-212ENST00000533058 C9orf118A6NHY6 69 aa7.45□□□□□ -1.22
TRAPPC4-212ENST00000533058 TAX1BP3O14907 124 aa7.45□□□□□ -1.22
TRAPPC4-212ENST00000533058 TRACP01848 142 aa7.45□□□□□ -1.22
TRAPPC4-212ENST00000533058 ATXN8Q156A1 80 aa7.45□□□□□ -1.22
TRAPPC4-212ENST00000533058 COL5A1-AS1Q5SY13 56 aa7.45□□□□□ -1.22
TRAPPC4-212ENST00000533058 HRCT1Q6UXD1 115 aa7.45□□□□□ -1.22
TRAPPC4-212ENST00000533058 H3BQ85 93 aa7.44□□□□□ -1.22
TRAPPC4-212ENST00000533058 TCL1BO95988 128 aa7.44□□□□□ -1.22
TRAPPC4-212ENST00000533058 SPINK1P00995 79 aa7.43□□□□□ -1.22
TRAPPC4-212ENST00000533058 NDUFV3P56181 108 aaKnown RBP7.43□□□□□ -1.22
TRAPPC4-212ENST00000533058 TRBV20-1A0A075B6N2 111 aa7.41□□□□□ -1.22
TRAPPC4-212ENST00000533058 A0A0G2JQZ4 141 aa7.41□□□□□ -1.22
TRAPPC4-212ENST00000533058 A0A1W2PPM0 123 aa7.41□□□□□ -1.22
TRAPPC4-212ENST00000533058 TMEM256-PLSCR3K7ERE1 68 aa7.41□□□□□ -1.22
TRAPPC4-212ENST00000533058 Q6JHZ5 121 aa7.41□□□□□ -1.22
TRAPPC4-212ENST00000533058 A0A1B0GV72 72 aa7.4□□□□□ -1.22
TRAPPC4-212ENST00000533058 CDIP1Q9H305 208 aa7.4□□□□□ -1.22
TRAPPC4-212ENST00000533058 H3BMG7 143 aa7.39□□□□□ -1.23
TRAPPC4-212ENST00000533058 BAALC-AS2P0C853 105 aa7.39□□□□□ -1.23
TRAPPC4-212ENST00000533058 IGLV8-61A0A075B6I0 122 aa7.38□□□□□ -1.23
TRAPPC4-212ENST00000533058 RETNLBQ9BQ08 111 aa7.38□□□□□ -1.23
TRAPPC4-212ENST00000533058 RPS29P62273 56 aaKnown RBP7.37□□□□□ -1.23
TRAPPC4-212ENST00000533058 CD164Q04900 197 aa7.37□□□□□ -1.23
TRAPPC4-212ENST00000533058 TPRXLQ17RH7 258 aa7.37□□□□□ -1.23
TRAPPC4-212ENST00000533058 IGFL1Q6UW32 110 aa7.37□□□□□ -1.23
TRAPPC4-212ENST00000533058 IGLV7-46A0A075B6I9 117 aa7.36□□□□□ -1.23
TRAPPC4-212ENST00000533058 C9JAW5 83 aa7.36□□□□□ -1.23
TRAPPC4-212ENST00000533058 H3BS24 57 aa7.36□□□□□ -1.23
TRAPPC4-212ENST00000533058 UBE2V1Q13404 147 aa7.36□□□□□ -1.23
TRAPPC4-212ENST00000533058 FP248Q71RG6 208 aaPredicted RBP7.36□□□□□ -1.23
TRAPPC4-212ENST00000533058 ANKRD29Q8N6D5 301 aa7.36□□□□□ -1.23
TRAPPC4-212ENST00000533058 LIMD2Q9BT23 127 aa7.36□□□□□ -1.23
TRAPPC4-212ENST00000533058 SPCS1Q9Y6A9 102 aa7.36□□□□□ -1.23
TRAPPC4-212ENST00000533058 TRBV7-7A0A0K0K1E9 115 aa7.3□□□□□ -1.24
TRAPPC4-212ENST00000533058 RBM3P98179 157 aaKnown RBP7.3□□□□□ -1.24
TRAPPC4-212ENST00000533058 MTURNQ8N3F0 131 aa7.3□□□□□ -1.24
TRAPPC4-212ENST00000533058 DSCR8Q96T75 97 aa7.3□□□□□ -1.24
TRAPPC4-212ENST00000533058 TEN1Q86WV5 123 aa7.29□□□□□ -1.24
TRAPPC4-212ENST00000533058 VPS25Q9BRG1 176 aa7.28□□□□□ -1.24
TRAPPC4-212ENST00000533058 MUC2Q02817 5179 aa7.28□□□□□ -1.24
TRAPPC4-212ENST00000533058 JMJD7-PLA2G4BH0Y9G9 81 aa7.27□□□□□ -1.25
TRAPPC4-212ENST00000533058 H3BT86 120 aa7.27□□□□□ -1.25
TRAPPC4-212ENST00000533058 K7EP34 96 aa7.27□□□□□ -1.25
TRAPPC4-212ENST00000533058 CCKP06307 115 aa7.26□□□□□ -1.25
TRAPPC4-212ENST00000533058 Q5XG85 94 aa7.26□□□□□ -1.25
TRAPPC4-212ENST00000533058 Q6Q795 121 aa7.26□□□□□ -1.25
TRAPPC4-212ENST00000533058 GTF2H5Q6ZYL4 71 aa7.26□□□□□ -1.25
TRAPPC4-212ENST00000533058 A0A1W2PNM2 257 aa7.25□□□□□ -1.25
TRAPPC4-212ENST00000533058 KRTAP13-3Q3SY46 172 aa7.25□□□□□ -1.25
TRAPPC4-212ENST00000533058 A0A087WSZ3 146 aa7.24□□□□□ -1.25
TRAPPC4-212ENST00000533058 TRBV7-4A0A0J9YYF1 115 aa7.24□□□□□ -1.25
TRAPPC4-212ENST00000533058 SS18L2Q9UHA2 77 aa7.24□□□□□ -1.25
TRAPPC4-212ENST00000533058 C14orf132Q9NPU4 83 aa7.23□□□□□ -1.25
TRAPPC4-212ENST00000533058 C1orf195Q5TG92 126 aa7.22□□□□□ -1.25
TRAPPC4-212ENST00000533058 A0A0U1RQV1 116 aa7.21□□□□□ -1.26
TRAPPC4-212ENST00000533058 MUC17Q685J3 4493 aa7.21□□□□□ -1.26
TRAPPC4-212ENST00000533058 PDE6GP18545 87 aa7.2□□□□□ -1.26
TRAPPC4-212ENST00000533058 LOC110117498A0A087WWA1 95 aa7.19□□□□□ -1.26
TRAPPC4-212ENST00000533058 ASB16-AS1Q495Z4 193 aa7.19□□□□□ -1.26
TRAPPC4-212ENST00000533058 Q6ZQT0 140 aa7.18□□□□□ -1.26
TRAPPC4-212ENST00000533058 OBSCN-AS1Q96MR7 158 aa7.18□□□□□ -1.26
TRAPPC4-212ENST00000533058 PRO0461Q9UI25 63 aa7.16□□□□□ -1.26
TRAPPC4-212ENST00000533058 F8W1H4 67 aa7.14□□□□□ -1.27
TRAPPC4-212ENST00000533058 LCE2BO14633 110 aa7.14□□□□□ -1.27
TRAPPC4-212ENST00000533058 XP32Q5T750 250 aa7.14□□□□□ -1.27
TRAPPC4-212ENST00000533058 C9orf92A6NGG3 77 aa7.13□□□□□ -1.27
TRAPPC4-212ENST00000533058 SEC61BP60468 96 aaKnown RBP7.13□□□□□ -1.27
TRAPPC4-212ENST00000533058 SIGMAR1Q99720 223 aa7.13□□□□□ -1.27
TRAPPC4-212ENST00000533058 A0A1B0GV90 55 aa7.11□□□□□ -1.27
TRAPPC4-212ENST00000533058 IGKV4-1P06312 121 aa7.11□□□□□ -1.27
TRAPPC4-212ENST00000533058 DEFB116Q30KQ4 102 aa7.11□□□□□ -1.27
TRAPPC4-212ENST00000533058 FAT4Q6V0I7 4981 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 132.5 ms