RNA–Protein interactions for RNA: ENST00000532881.5

SSH3-210, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 1 (best)

Gene SSH3, Length 2,587 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-210ENST00000532881 PANO1I0J062 215 aa9.33□□□□□ -0.92
SSH3-210ENST00000532881 SPRR4Q96PI1 79 aa9.33□□□□□ -0.92
SSH3-210ENST00000532881 RPL37AP61513 92 aaKnown RBP9.32□□□□□ -0.92
SSH3-210ENST00000532881 A0A087WSZ3 146 aa9.31□□□□□ -0.92
SSH3-210ENST00000532881 APLNQ9ULZ1 77 aa9.31□□□□□ -0.92
SSH3-210ENST00000532881 STARD9Q9P2P6 4700 aa9.31□□□□□ -0.92
SSH3-210ENST00000532881 LINC00474Q9P2X8 69 aa9.3□□□□□ -0.92
SSH3-210ENST00000532881 C5orf47Q569G3 176 aa9.29□□□□□ -0.92
SSH3-210ENST00000532881 A0A0U1RQV1 116 aa9.29□□□□□ -0.92
SSH3-210ENST00000532881 MDFIQ99750 246 aa9.28□□□□□ -0.92
SSH3-210ENST00000532881 FRAS1Q86XX4 4008 aa9.28□□□□□ -0.92
SSH3-210ENST00000532881 CNBPP62633 177 aaKnown RBP9.28□□□□□ -0.92
SSH3-210ENST00000532881 SERP1Q9Y6X1 66 aa9.28□□□□□ -0.92
SSH3-210ENST00000532881 FAM229BQ4G0N7 80 aa9.27□□□□□ -0.93
SSH3-210ENST00000532881 WFDC13Q8IUB5 93 aa9.27□□□□□ -0.93
SSH3-210ENST00000532881 UBE2AP49459 152 aa9.26□□□□□ -0.93
SSH3-210ENST00000532881 KMT2AQ03164 3969 aa9.26□□□□□ -0.93
SSH3-210ENST00000532881 DYNC2H1Q8NCM8 4307 aaKnown RBP9.25□□□□□ -0.93
SSH3-210ENST00000532881 FP248Q71RG6 208 aaPredicted RBP9.25□□□□□ -0.93
SSH3-210ENST00000532881 PRKDCP78527 4128 aaKnown RBP9.24□□□□□ -0.93
SSH3-210ENST00000532881 LRCOL1A6NCL2 159 aa9.22□□□□□ -0.93
SSH3-210ENST00000532881 PRR4Q16378 134 aa9.22□□□□□ -0.93
SSH3-210ENST00000532881 NDUFC1O43677 76 aa9.2□□□□□ -0.94
SSH3-210ENST00000532881 HCG22E2RYF7 251 aa9.19□□□□□ -0.94
SSH3-210ENST00000532881 C9orf163Q8N9P6 203 aa9.19□□□□□ -0.94
SSH3-210ENST00000532881 A0A1B0GW54 56 aa9.18□□□□□ -0.94
SSH3-210ENST00000532881 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.18□□□□□ -0.94
SSH3-210ENST00000532881 MPLKIPQ8TAP9 179 aa9.18□□□□□ -0.94
SSH3-210ENST00000532881 DNAH2Q9P225 4427 aa9.18□□□□□ -0.94
SSH3-210ENST00000532881 NBDYA0A0U1RRE5 68 aa9.18□□□□□ -0.94
SSH3-210ENST00000532881 HECTD4Q9Y4D8 3996 aa9.16□□□□□ -0.94
SSH3-210ENST00000532881 TGP01266 2768 aa9.16□□□□□ -0.94
SSH3-210ENST00000532881 Q6ZRN7 208 aaPredicted RBP9.15□□□□□ -0.94
SSH3-210ENST00000532881 IGLV8-61A0A075B6I0 122 aa9.14□□□□□ -0.95
SSH3-210ENST00000532881 VPS13DQ5THJ4 4388 aa9.14□□□□□ -0.95
SSH3-210ENST00000532881 IGLV9-49A0A0B4J1Y8 123 aa9.14□□□□□ -0.95
SSH3-210ENST00000532881 ANAPC11Q9NYG5 84 aa9.13□□□□□ -0.95
SSH3-210ENST00000532881 LINC00336Q6ZUF6 198 aa9.13□□□□□ -0.95
SSH3-210ENST00000532881 FBN3Q75N90 2809 aa9.12□□□□□ -0.95
SSH3-210ENST00000532881 SMIM26A0A096LP01 95 aa9.12□□□□□ -0.95
SSH3-210ENST00000532881 C14orf177Q52M58 125 aa9.12□□□□□ -0.95
SSH3-210ENST00000532881 B9D2Q9BPU9 175 aa9.12□□□□□ -0.95
SSH3-210ENST00000532881 DNAH8Q96JB1 4490 aa9.12□□□□□ -0.95
SSH3-210ENST00000532881 MEGF8Q7Z7M0 2845 aa9.12□□□□□ -0.95
SSH3-210ENST00000532881 LCE6AA0A183 80 aa9.12□□□□□ -0.95
SSH3-210ENST00000532881 ZCCHC13Q8WW36 166 aaKnown RBP9.1□□□□□ -0.95
SSH3-210ENST00000532881 DNAH17Q9UFH2 4485 aa9.09□□□□□ -0.95
SSH3-210ENST00000532881 LINC00472Q9H8W2 130 aa9.08□□□□□ -0.96
SSH3-210ENST00000532881 DNHD1Q96M86 4753 aa9.08□□□□□ -0.96
SSH3-210ENST00000532881 H0Y9J4 135 aa9.07□□□□□ -0.96
SSH3-210ENST00000532881 LINC00208Q96KT6 92 aa9.07□□□□□ -0.96
SSH3-210ENST00000532881 SPRR1BP22528 89 aa9.07□□□□□ -0.96
SSH3-210ENST00000532881 ATP5EP56381 51 aaPredicted RBP9.07□□□□□ -0.96
SSH3-210ENST00000532881 KRTAP29-1A8MX34 341 aaPredicted RBP9.06□□□□□ -0.96
SSH3-210ENST00000532881 CASC2Q6XLA1 102 aa9.06□□□□□ -0.96
SSH3-210ENST00000532881 KRTAP13-1Q8IUC0 172 aa9.06□□□□□ -0.96
SSH3-210ENST00000532881 C1orf64Q8NEQ6 169 aa9.06□□□□□ -0.96
SSH3-210ENST00000532881 PRR15Q8IV56 129 aa9.05□□□□□ -0.96
SSH3-210ENST00000532881 SPACA4Q8TDM5 124 aa9.05□□□□□ -0.96
SSH3-210ENST00000532881 DNAH6Q9C0G6 4158 aa9.05□□□□□ -0.96
SSH3-210ENST00000532881 A0A087WTM6 91 aa9.03□□□□□ -0.96
SSH3-210ENST00000532881 NUPR2A6NF83 97 aa9.02□□□□□ -0.97
SSH3-210ENST00000532881 hDV103S1A0JD37 113 aa9.02□□□□□ -0.97
SSH3-210ENST00000532881 A8MWP4 228 aa9.02□□□□□ -0.97
SSH3-210ENST00000532881 PSORS1C2Q9UIG4 136 aa9□□□□□ -0.97
SSH3-210ENST00000532881 H0Y9P7 68 aa9□□□□□ -0.97
SSH3-210ENST00000532881 MOBPQ13875 183 aa9□□□□□ -0.97
SSH3-210ENST00000532881 RTL8CO15255 209 aa8.99□□□□□ -0.97
SSH3-210ENST00000532881 MP68P56378 58 aa8.98□□□□□ -0.97
SSH3-210ENST00000532881 Q96NJ1 140 aa8.98□□□□□ -0.97
SSH3-210ENST00000532881 TRAV22A0A0B4J277 110 aa8.97□□□□□ -0.97
SSH3-210ENST00000532881 MMP24-AS1A0A0U1RRL7 71 aa8.97□□□□□ -0.97
SSH3-210ENST00000532881 BRK1Q8WUW1 75 aa8.96□□□□□ -0.98
SSH3-210ENST00000532881 A0A087X002 238 aa8.93□□□□□ -0.98
SSH3-210ENST00000532881 NOTCH2NLQ7Z3S9 236 aa8.93□□□□□ -0.98
SSH3-210ENST00000532881 WWC2-AS2Q96NR7 200 aa8.93□□□□□ -0.98
SSH3-210ENST00000532881 ALMS1Q8TCU4 4167 aa8.93□□□□□ -0.98
SSH3-210ENST00000532881 IGHV6-1A0A0B4J1U7 121 aa8.92□□□□□ -0.98
SSH3-210ENST00000532881 PSPHP1O15172 72 aa8.92□□□□□ -0.98
SSH3-210ENST00000532881 IGLV5-52A0A0A0MRZ9 124 aa8.92□□□□□ -0.98
SSH3-210ENST00000532881 DNAH11Q96DT5 4516 aa8.92□□□□□ -0.98
SSH3-210ENST00000532881 PCOTHQ58A44 107 aa8.9□□□□□ -0.99
SSH3-210ENST00000532881 NDUFB1O75438 58 aa8.88□□□□□ -0.99
SSH3-210ENST00000532881 SPINK6Q6UWN8 80 aa8.88□□□□□ -0.99
SSH3-210ENST00000532881 HYDINQ4G0P3 5121 aa8.88□□□□□ -0.99
SSH3-210ENST00000532881 DNAH5Q8TE73 4624 aa8.88□□□□□ -0.99
SSH3-210ENST00000532881 NDUFS5O43920 106 aa8.88□□□□□ -0.99
SSH3-210ENST00000532881 Q6ZR54 194 aa8.88□□□□□ -0.99
SSH3-210ENST00000532881 SEC61GP60059 68 aa8.87□□□□□ -0.99
SSH3-210ENST00000532881 LINC00483Q53H64 154 aa8.87□□□□□ -0.99
SSH3-210ENST00000532881 PRO0628Q9UI54 55 aa8.87□□□□□ -0.99
SSH3-210ENST00000532881 CYP4F30PQ9H0H9 118 aa8.86□□□□□ -0.99
SSH3-210ENST00000532881 ZNF861PO60384 105 aa8.86□□□□□ -0.99
SSH3-210ENST00000532881 LY6G6CO95867 125 aa8.86□□□□□ -0.99
SSH3-210ENST00000532881 PKIGQ9Y2B9 76 aa8.86□□□□□ -0.99
SSH3-210ENST00000532881 C8orf17Q9NRJ1 99 aa8.85□□□□□ -0.99
SSH3-210ENST00000532881 PLAC8Q9NZF1 115 aa8.84□□□□□ -0.99
SSH3-210ENST00000532881 LRP1BQ9NZR2 4599 aa8.82□□□□□ -1
SSH3-210ENST00000532881 CIRBP-AS1Q8TBR5 109 aa8.82□□□□□ -1
SSH3-210ENST00000532881 C1orf134Q5TEV5 83 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms