RNA–Protein interactions for RNA: ENST00000532787.5

CTNND1-233, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-233ENST00000532787 CYSTM1Q9H1C7 97 aa4.71□□□□□ -1.66
CTNND1-233ENST00000532787 TNP2Q05952 138 aa4.7□□□□□ -1.66
CTNND1-233ENST00000532787 S4R3F8 94 aa4.7□□□□□ -1.66
CTNND1-233ENST00000532787 SPTBN4Q9H254 2564 aa4.7□□□□□ -1.66
CTNND1-233ENST00000532787 LINC00472Q9H8W2 130 aa4.69□□□□□ -1.66
CTNND1-233ENST00000532787 KRTAP1-1Q07627 177 aa4.69□□□□□ -1.66
CTNND1-233ENST00000532787 Q5W150 140 aa4.68□□□□□ -1.66
CTNND1-233ENST00000532787 SZT2Q5T011 3432 aa4.67□□□□□ -1.66
CTNND1-233ENST00000532787 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.67□□□□□ -1.66
CTNND1-233ENST00000532787 MTORP42345 2549 aa4.66□□□□□ -1.66
CTNND1-233ENST00000532787 OXTP01178 125 aa4.66□□□□□ -1.66
CTNND1-233ENST00000532787 ROMO1P60602 79 aa4.65□□□□□ -1.67
CTNND1-233ENST00000532787 USP9YO00507 2555 aaPredicted RBP4.64□□□□□ -1.67
CTNND1-233ENST00000532787 CR1P17927 2039 aa4.63□□□□□ -1.67
CTNND1-233ENST00000532787 EPG5Q9HCE0 2579 aa4.63□□□□□ -1.67
CTNND1-233ENST00000532787 XIRP2A4UGR9 3374 aa4.63□□□□□ -1.67
CTNND1-233ENST00000532787 RPL37P61927 97 aaKnown RBP4.62□□□□□ -1.67
CTNND1-233ENST00000532787 ZNF292O60281 2723 aa4.62□□□□□ -1.67
CTNND1-233ENST00000532787 LAMA1P25391 3075 aa4.61□□□□□ -1.67
CTNND1-233ENST00000532787 Q6ZR54 194 aa4.61□□□□□ -1.67
CTNND1-233ENST00000532787 Q8NDZ9 215 aa4.61□□□□□ -1.67
CTNND1-233ENST00000532787 REV3LO60673 3130 aa4.6□□□□□ -1.67
CTNND1-233ENST00000532787 KRTAP26-1Q6PEX3 210 aa4.6□□□□□ -1.67
CTNND1-233ENST00000532787 ANKRD17O75179 2603 aaKnown RBP4.59□□□□□ -1.67
CTNND1-233ENST00000532787 H1FX-AS1Q4G0G2 97 aa4.59□□□□□ -1.67
CTNND1-233ENST00000532787 R4GN34 69 aa4.59□□□□□ -1.68
CTNND1-233ENST00000532787 FLNBO75369 2602 aaKnown RBP4.59□□□□□ -1.68
CTNND1-233ENST00000532787 SEC61BP60468 96 aaKnown RBP4.59□□□□□ -1.68
CTNND1-233ENST00000532787 DNAH14Q0VDD8 3507 aa4.59□□□□□ -1.68
CTNND1-233ENST00000532787 VCANP13611 3396 aa4.56□□□□□ -1.68
CTNND1-233ENST00000532787 NDUFAF8A1L188 74 aa4.56□□□□□ -1.68
CTNND1-233ENST00000532787 M0R2T5 61 aa4.55□□□□□ -1.68
CTNND1-233ENST00000532787 VPS13AQ96RL7 3174 aa4.55□□□□□ -1.68
CTNND1-233ENST00000532787 KRTAP29-1A8MX34 341 aaPredicted RBP4.54□□□□□ -1.68
CTNND1-233ENST00000532787 SPTBN5Q9NRC6 3674 aaKnown RBP4.53□□□□□ -1.68
CTNND1-233ENST00000532787 WDFY4Q6ZS81 3184 aa4.53□□□□□ -1.68
CTNND1-233ENST00000532787 MGAQ8IWI9 3026 aa4.53□□□□□ -1.69
CTNND1-233ENST00000532787 CFAP54Q96N23 3096 aa4.52□□□□□ -1.69
CTNND1-233ENST00000532787 A6NN06 94 aa4.52□□□□□ -1.69
CTNND1-233ENST00000532787 KRTAP25-1Q3LHN0 102 aa4.52□□□□□ -1.69
CTNND1-233ENST00000532787 SPATA8Q6RVD6 105 aa4.52□□□□□ -1.69
CTNND1-233ENST00000532787 KRTAP4-16G5E9R7 235 aaPredicted RBP4.51□□□□□ -1.69
CTNND1-233ENST00000532787 TNRC18O15417 2968 aaPredicted RBP4.5□□□□□ -1.69
CTNND1-233ENST00000532787 USP24Q9UPU5 2620 aa4.49□□□□□ -1.69
CTNND1-233ENST00000532787 AKAP13Q12802 2813 aa4.49□□□□□ -1.69
CTNND1-233ENST00000532787 RPS29P62273 56 aaKnown RBP4.49□□□□□ -1.69
CTNND1-233ENST00000532787 DMBT1Q9UGM3 2413 aaPredicted RBP4.49□□□□□ -1.69
CTNND1-233ENST00000532787 EYSQ5T1H1 3165 aa4.49□□□□□ -1.69
CTNND1-233ENST00000532787 M0QZ58 72 aa4.49□□□□□ -1.69
CTNND1-233ENST00000532787 PLAC4Q8WY50 150 aa4.48□□□□□ -1.69
CTNND1-233ENST00000532787 DSPP15924 2871 aaKnown RBP4.47□□□□□ -1.69
CTNND1-233ENST00000532787 A0A087X002 238 aa4.46□□□□□ -1.7
CTNND1-233ENST00000532787 LCE6AA0A183 80 aa4.46□□□□□ -1.7
CTNND1-233ENST00000532787 KRTAP1-5Q9BYS1 174 aa4.46□□□□□ -1.7
CTNND1-233ENST00000532787 FRYLO94915 3013 aa4.46□□□□□ -1.7
CTNND1-233ENST00000532787 ADM2Q7Z4H4 148 aa4.45□□□□□ -1.7
CTNND1-233ENST00000532787 PANO1I0J062 215 aa4.44□□□□□ -1.7
CTNND1-233ENST00000532787 SPEGQ15772 3267 aa4.44□□□□□ -1.7
CTNND1-233ENST00000532787 Q5VSD8 79 aa4.44□□□□□ -1.7
CTNND1-233ENST00000532787 COL6A3P12111 3177 aa4.43□□□□□ -1.7
CTNND1-233ENST00000532787 KRTAP10-1P60331 282 aa4.42□□□□□ -1.7
CTNND1-233ENST00000532787 C20orf166-AS1Q96NR2 134 aa4.42□□□□□ -1.7
CTNND1-233ENST00000532787 CELSR3Q9NYQ7 3312 aa4.41□□□□□ -1.7
CTNND1-233ENST00000532787 NBEAQ8NFP9 2946 aa4.4□□□□□ -1.7
CTNND1-233ENST00000532787 CENPEQ02224 2701 aa4.38□□□□□ -1.71
CTNND1-233ENST00000532787 KRTAP10-2P60368 255 aa4.37□□□□□ -1.71
CTNND1-233ENST00000532787 FRYQ5TBA9 3013 aa4.37□□□□□ -1.71
CTNND1-233ENST00000532787 BOD1L1Q8NFC6 3051 aa4.36□□□□□ -1.71
CTNND1-233ENST00000532787 FREM2Q5SZK8 3169 aa4.36□□□□□ -1.71
CTNND1-233ENST00000532787 MGAM2Q2M2H8 2515 aa4.36□□□□□ -1.71
CTNND1-233ENST00000532787 MYO15AQ9UKN7 3530 aa4.36□□□□□ -1.71
CTNND1-233ENST00000532787 USP34Q70CQ2 3546 aa4.35□□□□□ -1.71
CTNND1-233ENST00000532787 A8MU10 97 aa4.34□□□□□ -1.71
CTNND1-233ENST00000532787 NOTCH2NLQ7Z3S9 236 aa4.34□□□□□ -1.71
CTNND1-233ENST00000532787 ADGRG4Q8IZF6 3080 aa4.33□□□□□ -1.72
CTNND1-233ENST00000532787 A8MUU9 505 aa4.32□□□□□ -1.72
CTNND1-233ENST00000532787 STAB2Q8WWQ8 2551 aa4.32□□□□□ -1.72
CTNND1-233ENST00000532787 DMXL2Q8TDJ6 3036 aa4.32□□□□□ -1.72
CTNND1-233ENST00000532787 IGSF10Q6WRI0 2623 aa4.31□□□□□ -1.72
CTNND1-233ENST00000532787 DMXL1Q9Y485 3027 aa4.31□□□□□ -1.72
CTNND1-233ENST00000532787 FLNAP21333 2647 aaKnown RBP4.31□□□□□ -1.72
CTNND1-233ENST00000532787 ATRQ13535 2644 aa4.3□□□□□ -1.72
CTNND1-233ENST00000532787 MAP1AP78559 2803 aaPredicted RBP4.3□□□□□ -1.72
CTNND1-233ENST00000532787 KRTAP13-1Q8IUC0 172 aa4.3□□□□□ -1.72
CTNND1-233ENST00000532787 LOC400499M0QZD8 3231 aa4.29□□□□□ -1.72
CTNND1-233ENST00000532787 FLNCQ14315 2725 aa4.29□□□□□ -1.72
CTNND1-233ENST00000532787 Q6ZRN7 208 aaPredicted RBP4.28□□□□□ -1.72
CTNND1-233ENST00000532787 ATMQ13315 3056 aa4.28□□□□□ -1.73
CTNND1-233ENST00000532787 C10orf95Q9H7T3 257 aa4.27□□□□□ -1.73
CTNND1-233ENST00000532787 KRTAP11-1Q8IUC1 163 aa4.27□□□□□ -1.73
CTNND1-233ENST00000532787 ITPR3Q14573 2671 aa4.27□□□□□ -1.73
CTNND1-233ENST00000532787 HECTD1Q9ULT8 2610 aa4.27□□□□□ -1.73
CTNND1-233ENST00000532787 CFAP46Q8IYW2 2715 aa4.25□□□□□ -1.73
CTNND1-233ENST00000532787 BAHCC1Q9P281 2608 aa4.25□□□□□ -1.73
CTNND1-233ENST00000532787 STAB1Q9NY15 2570 aa4.25□□□□□ -1.73
CTNND1-233ENST00000532787 LRBAP50851 2863 aa4.25□□□□□ -1.73
CTNND1-233ENST00000532787 SETXQ7Z333 2677 aaKnown RBP4.25□□□□□ -1.73
CTNND1-233ENST00000532787 KRTAP7-1Q8IUC3 87 aa4.25□□□□□ -1.73
CTNND1-233ENST00000532787 TNP1P09430 55 aa4.24□□□□□ -1.73
CTNND1-233ENST00000532787 PP632Q6XCG6 107 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms