RNA–Protein interactions for RNA: ENST00000532649.5

CTNND1-232, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,026 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-232ENST00000532649 DSPP15924 2871 aaKnown RBP5.58□□□□□ -1.52
CTNND1-232ENST00000532649 A0A0G2JQZ4 141 aa5.58□□□□□ -1.52
CTNND1-232ENST00000532649 KLKP1Q107X0 134 aa5.57□□□□□ -1.52
CTNND1-232ENST00000532649 S4R3F8 94 aa5.56□□□□□ -1.52
CTNND1-232ENST00000532649 TRIOO75962 3097 aa5.55□□□□□ -1.52
CTNND1-232ENST00000532649 IGSF10Q6WRI0 2623 aa5.54□□□□□ -1.52
CTNND1-232ENST00000532649 TEX15Q9BXT5 2789 aa5.53□□□□□ -1.52
CTNND1-232ENST00000532649 CSAG1Q6PB30 78 aa5.53□□□□□ -1.52
CTNND1-232ENST00000532649 H7BZZ5 65 aa5.52□□□□□ -1.53
CTNND1-232ENST00000532649 SZT2Q5T011 3432 aa5.52□□□□□ -1.53
CTNND1-232ENST00000532649 A0A1B0GU33 70 aa5.52□□□□□ -1.53
CTNND1-232ENST00000532649 SPANXA2-OT1Q8N9U9 137 aa5.52□□□□□ -1.53
CTNND1-232ENST00000532649 BAHCC1Q9P281 2608 aa5.51□□□□□ -1.53
CTNND1-232ENST00000532649 VPS13AQ96RL7 3174 aa5.51□□□□□ -1.53
CTNND1-232ENST00000532649 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.5□□□□□ -1.53
CTNND1-232ENST00000532649 UNC79Q9P2D8 2635 aa5.49□□□□□ -1.53
CTNND1-232ENST00000532649 SETXQ7Z333 2677 aaKnown RBP5.48□□□□□ -1.53
CTNND1-232ENST00000532649 CHD6Q8TD26 2715 aa5.48□□□□□ -1.53
CTNND1-232ENST00000532649 SEC61BP60468 96 aaKnown RBP5.48□□□□□ -1.53
CTNND1-232ENST00000532649 DMAC1Q96GE9 116 aa5.47□□□□□ -1.53
CTNND1-232ENST00000532649 COL6A5A8TX70 2615 aa5.47□□□□□ -1.53
CTNND1-232ENST00000532649 PLAC4Q8WY50 150 aa5.47□□□□□ -1.53
CTNND1-232ENST00000532649 A0A1W2PNM2 257 aa5.46□□□□□ -1.54
CTNND1-232ENST00000532649 R4GN34 69 aa5.45□□□□□ -1.54
CTNND1-232ENST00000532649 STAB1Q9NY15 2570 aa5.44□□□□□ -1.54
CTNND1-232ENST00000532649 ZCCHC13Q8WW36 166 aaKnown RBP5.43□□□□□ -1.54
CTNND1-232ENST00000532649 SPINK7P58062 85 aa5.43□□□□□ -1.54
CTNND1-232ENST00000532649 CELSR3Q9NYQ7 3312 aa5.43□□□□□ -1.54
CTNND1-232ENST00000532649 MAP1AP78559 2803 aaPredicted RBP5.43□□□□□ -1.54
CTNND1-232ENST00000532649 FAM229BQ4G0N7 80 aa5.42□□□□□ -1.54
CTNND1-232ENST00000532649 Q75L30 129 aa5.42□□□□□ -1.54
CTNND1-232ENST00000532649 PRAC1Q96KF2 57 aa5.42□□□□□ -1.54
CTNND1-232ENST00000532649 KRTAP1-5Q9BYS1 174 aa5.41□□□□□ -1.54
CTNND1-232ENST00000532649 PLAC8Q9NZF1 115 aa5.41□□□□□ -1.54
CTNND1-232ENST00000532649 H1FX-AS1Q4G0G2 97 aa5.4□□□□□ -1.54
CTNND1-232ENST00000532649 LAMA1P25391 3075 aa5.4□□□□□ -1.54
CTNND1-232ENST00000532649 FRYQ5TBA9 3013 aa5.38□□□□□ -1.55
CTNND1-232ENST00000532649 VCANP13611 3396 aa5.38□□□□□ -1.55
CTNND1-232ENST00000532649 COL6A3P12111 3177 aa5.38□□□□□ -1.55
CTNND1-232ENST00000532649 LCE6AA0A183 80 aa5.38□□□□□ -1.55
CTNND1-232ENST00000532649 Q5VSD8 79 aa5.38□□□□□ -1.55
CTNND1-232ENST00000532649 NOTCH1P46531 2555 aa5.37□□□□□ -1.55
CTNND1-232ENST00000532649 DNAH14Q0VDD8 3507 aa5.36□□□□□ -1.55
CTNND1-232ENST00000532649 TNRC18O15417 2968 aaPredicted RBP5.36□□□□□ -1.55
CTNND1-232ENST00000532649 GCN1Q92616 2671 aaKnown RBP5.36□□□□□ -1.55
CTNND1-232ENST00000532649 Q8NDZ9 215 aa5.36□□□□□ -1.55
CTNND1-232ENST00000532649 FRYLO94915 3013 aa5.34□□□□□ -1.55
CTNND1-232ENST00000532649 M0QZ58 72 aa5.34□□□□□ -1.56
CTNND1-232ENST00000532649 UBR5O95071 2799 aaPredicted RBP5.33□□□□□ -1.56
CTNND1-232ENST00000532649 SPRR1AP35321 89 aa5.32□□□□□ -1.56
CTNND1-232ENST00000532649 KRTAP26-1Q6PEX3 210 aa5.32□□□□□ -1.56
CTNND1-232ENST00000532649 OXTP01178 125 aa5.32□□□□□ -1.56
CTNND1-232ENST00000532649 KRTAP10-2P60368 255 aa5.32□□□□□ -1.56
CTNND1-232ENST00000532649 ITPR2Q14571 2701 aa5.32□□□□□ -1.56
CTNND1-232ENST00000532649 LINC01558Q9Y6Z2 57 aa5.32□□□□□ -1.56
CTNND1-232ENST00000532649 ATMQ13315 3056 aa5.32□□□□□ -1.56
CTNND1-232ENST00000532649 KRTAP10-1P60331 282 aa5.32□□□□□ -1.56
CTNND1-232ENST00000532649 FLNCQ14315 2725 aa5.3□□□□□ -1.56
CTNND1-232ENST00000532649 KRTAP16-1A8MUX0 517 aa5.3□□□□□ -1.56
CTNND1-232ENST00000532649 DMXL2Q8TDJ6 3036 aa5.3□□□□□ -1.56
CTNND1-232ENST00000532649 COL12A1Q99715 3063 aa5.29□□□□□ -1.56
CTNND1-232ENST00000532649 ROMO1P60602 79 aa5.29□□□□□ -1.56
CTNND1-232ENST00000532649 BOD1L1Q8NFC6 3051 aa5.29□□□□□ -1.56
CTNND1-232ENST00000532649 OCR1Q9BZK8 76 aa5.29□□□□□ -1.56
CTNND1-232ENST00000532649 SPTBN5Q9NRC6 3674 aaKnown RBP5.28□□□□□ -1.56
CTNND1-232ENST00000532649 NBEAL2Q6ZNJ1 2754 aa5.28□□□□□ -1.56
CTNND1-232ENST00000532649 ITPR1Q14643 2758 aa5.27□□□□□ -1.57
CTNND1-232ENST00000532649 NBEAL1Q6ZS30 2694 aa5.27□□□□□ -1.57
CTNND1-232ENST00000532649 RPL37P61927 97 aaKnown RBP5.27□□□□□ -1.57
CTNND1-232ENST00000532649 Q5W150 140 aa5.27□□□□□ -1.57
CTNND1-232ENST00000532649 Q8N9P0 234 aaPredicted RBP5.26□□□□□ -1.57
CTNND1-232ENST00000532649 Q5XG85 94 aa5.26□□□□□ -1.57
CTNND1-232ENST00000532649 Q6ZR54 194 aa5.25□□□□□ -1.57
CTNND1-232ENST00000532649 MMP24-AS1A0A0U1RRL7 71 aa5.25□□□□□ -1.57
CTNND1-232ENST00000532649 SPRR1BP22528 89 aa5.25□□□□□ -1.57
CTNND1-232ENST00000532649 TACC2O95359 2948 aa5.25□□□□□ -1.57
CTNND1-232ENST00000532649 ADM2Q7Z4H4 148 aa5.24□□□□□ -1.57
CTNND1-232ENST00000532649 Q5VV11 94 aa5.24□□□□□ -1.57
CTNND1-232ENST00000532649 ADGRG4Q8IZF6 3080 aa5.23□□□□□ -1.57
CTNND1-232ENST00000532649 PANO1I0J062 215 aa5.23□□□□□ -1.57
CTNND1-232ENST00000532649 UTP20O75691 2785 aaKnown RBP5.23□□□□□ -1.57
CTNND1-232ENST00000532649 LRBAP50851 2863 aa5.22□□□□□ -1.57
CTNND1-232ENST00000532649 FP248Q71RG6 208 aaPredicted RBP5.22□□□□□ -1.57
CTNND1-232ENST00000532649 KALRNO60229 2985 aa5.22□□□□□ -1.57
CTNND1-232ENST00000532649 EYSQ5T1H1 3165 aa5.21□□□□□ -1.58
CTNND1-232ENST00000532649 HIVEP1P15822 2718 aa5.2□□□□□ -1.58
CTNND1-232ENST00000532649 NSD1Q96L73 2696 aaPredicted RBP5.2□□□□□ -1.58
CTNND1-232ENST00000532649 FREM2Q5SZK8 3169 aa5.18□□□□□ -1.58
CTNND1-232ENST00000532649 LINC00472Q9H8W2 130 aa5.18□□□□□ -1.58
CTNND1-232ENST00000532649 DMXL1Q9Y485 3027 aa5.18□□□□□ -1.58
CTNND1-232ENST00000532649 KMT2BQ9UMN6 2715 aaPredicted RBP5.18□□□□□ -1.58
CTNND1-232ENST00000532649 C20orf166-AS1Q96NR2 134 aa5.17□□□□□ -1.58
CTNND1-232ENST00000532649 USP34Q70CQ2 3546 aa5.17□□□□□ -1.58
CTNND1-232ENST00000532649 REV3LO60673 3130 aa5.17□□□□□ -1.58
CTNND1-232ENST00000532649 KRTAP21-3Q3LHN1 58 aa5.16□□□□□ -1.58
CTNND1-232ENST00000532649 NBEAQ8NFP9 2946 aa5.15□□□□□ -1.58
CTNND1-232ENST00000532649 APCP25054 2843 aa5.15□□□□□ -1.59
CTNND1-232ENST00000532649 Q6ZRN7 208 aaPredicted RBP5.14□□□□□ -1.59
CTNND1-232ENST00000532649 KRTAP4-16G5E9R7 235 aaPredicted RBP5.13□□□□□ -1.59
CTNND1-232ENST00000532649 ZZEF1O43149 2961 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms