RNA–Protein interactions for RNA: ENST00000529994.1

SF3B2-208, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-208ENST00000529994 HIST1H4GQ99525 98 aa6.18□□□□□ -1.42
SF3B2-208ENST00000529994 PRO1933Q9H354 126 aa6.18□□□□□ -1.42
SF3B2-208ENST00000529994 NHP2Q9NX24 153 aaKnown RBP6.18□□□□□ -1.42
SF3B2-208ENST00000529994 VAMP3Q15836 100 aa6.17□□□□□ -1.42
SF3B2-208ENST00000529994 SMIM29Q86T20 159 aa6.16□□□□□ -1.42
SF3B2-208ENST00000529994 PAM16Q9Y3D7 125 aa6.16□□□□□ -1.42
SF3B2-208ENST00000529994 IGLV5-48A0A075B6I7 105 aa6.15□□□□□ -1.42
SF3B2-208ENST00000529994 COX8AP10176 69 aa6.15□□□□□ -1.42
SF3B2-208ENST00000529994 C14orf144Q96I85 54 aa6.15□□□□□ -1.42
SF3B2-208ENST00000529994 C9orf92A6NGG3 77 aa6.14□□□□□ -1.43
SF3B2-208ENST00000529994 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.14□□□□□ -1.43
SF3B2-208ENST00000529994 F8WEM9 126 aa6.14□□□□□ -1.43
SF3B2-208ENST00000529994 SPATA45Q537H7 98 aa6.14□□□□□ -1.43
SF3B2-208ENST00000529994 hADV29S1A0JD25 119 aa6.13□□□□□ -1.43
SF3B2-208ENST00000529994 LINC00575Q6W349 94 aa6.13□□□□□ -1.43
SF3B2-208ENST00000529994 Q6ZQY7 126 aa6.13□□□□□ -1.43
SF3B2-208ENST00000529994 CD164Q04900 197 aa6.12□□□□□ -1.43
SF3B2-208ENST00000529994 VAMP8Q9BV40 100 aa6.12□□□□□ -1.43
SF3B2-208ENST00000529994 FLGP20930 4061 aaPredicted RBP6.11□□□□□ -1.43
SF3B2-208ENST00000529994 RAB37Q96AX2 223 aa6.11□□□□□ -1.43
SF3B2-208ENST00000529994 COX6B2Q6YFQ2 88 aa6.1□□□□□ -1.43
SF3B2-208ENST00000529994 DLEU1O43261 78 aa6.09□□□□□ -1.43
SF3B2-208ENST00000529994 BVES-AS1Q5T3Y7 98 aa6.09□□□□□ -1.43
SF3B2-208ENST00000529994 CFC1P0CG37 223 aa6.08□□□□□ -1.44
SF3B2-208ENST00000529994 C1orf195Q5TG92 126 aa6.07□□□□□ -1.44
SF3B2-208ENST00000529994 C2orf91Q6ZV80 131 aa6.07□□□□□ -1.44
SF3B2-208ENST00000529994 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.06□□□□□ -1.44
SF3B2-208ENST00000529994 HIGD1BQ9P298 99 aa6.06□□□□□ -1.44
SF3B2-208ENST00000529994 TCL1BO95988 128 aa6.05□□□□□ -1.44
SF3B2-208ENST00000529994 IGFL1Q6UW32 110 aa6.05□□□□□ -1.44
SF3B2-208ENST00000529994 SNHG12Q9BXW3 62 aa6.05□□□□□ -1.44
SF3B2-208ENST00000529994 TMA7Q9Y2S6 64 aaKnown RBP6.05□□□□□ -1.44
SF3B2-208ENST00000529994 A0A0B4J2C4 111 aa6.04□□□□□ -1.44
SF3B2-208ENST00000529994 H3BUT2 72 aa6.04□□□□□ -1.44
SF3B2-208ENST00000529994 CEND1Q8N111 149 aa6.04□□□□□ -1.44
SF3B2-208ENST00000529994 CLEC2BQ92478 149 aa6.04□□□□□ -1.44
SF3B2-208ENST00000529994 OCIAD2Q56VL3 154 aa6.03□□□□□ -1.44
SF3B2-208ENST00000529994 Q5XG85 94 aa6.03□□□□□ -1.44
SF3B2-208ENST00000529994 Q6JHZ5 121 aa6.03□□□□□ -1.44
SF3B2-208ENST00000529994 SNCGO76070 127 aa6.02□□□□□ -1.45
SF3B2-208ENST00000529994 FXYD2P54710 66 aa6.02□□□□□ -1.45
SF3B2-208ENST00000529994 FAM218AQ96MZ4 157 aa6.02□□□□□ -1.45
SF3B2-208ENST00000529994 SSPOA2VEC9 5147 aa6.01□□□□□ -1.45
SF3B2-208ENST00000529994 TRBV7-7A0A0K0K1E9 115 aa6.01□□□□□ -1.45
SF3B2-208ENST00000529994 TMEM238LA0A1B0GVL6 79 aa6.01□□□□□ -1.45
SF3B2-208ENST00000529994 A6NJY4 79 aa6.01□□□□□ -1.45
SF3B2-208ENST00000529994 PYY3Q5JQD4 70 aa6.01□□□□□ -1.45
SF3B2-208ENST00000529994 USH2AO75445 5202 aa6□□□□□ -1.45
SF3B2-208ENST00000529994 H0YGX0 51 aa6□□□□□ -1.45
SF3B2-208ENST00000529994 PPDPFLQ8WWR9 84 aa6□□□□□ -1.45
SF3B2-208ENST00000529994 PRO1854Q9UHT4 67 aa6□□□□□ -1.45
SF3B2-208ENST00000529994 K7ERJ3 54 aa5.98□□□□□ -1.45
SF3B2-208ENST00000529994 RPL37P61927 97 aaKnown RBP5.98□□□□□ -1.45
SF3B2-208ENST00000529994 A0A1B0GV72 72 aa5.97□□□□□ -1.45
SF3B2-208ENST00000529994 TRIAP1O43715 76 aa5.97□□□□□ -1.45
SF3B2-208ENST00000529994 FABP2P12104 132 aa5.97□□□□□ -1.45
SF3B2-208ENST00000529994 NDUFV3P56181 108 aaKnown RBP5.97□□□□□ -1.45
SF3B2-208ENST00000529994 HSD52Q0P140 79 aa5.97□□□□□ -1.45
SF3B2-208ENST00000529994 Q6Q795 121 aa5.97□□□□□ -1.45
SF3B2-208ENST00000529994 PSMB2P49721 201 aa5.96□□□□□ -1.46
SF3B2-208ENST00000529994 LST1O00453 97 aa5.95□□□□□ -1.46
SF3B2-208ENST00000529994 H3BMG7 143 aa5.94□□□□□ -1.46
SF3B2-208ENST00000529994 FCGBPQ9Y6R7 5405 aaPredicted RBP5.94□□□□□ -1.46
SF3B2-208ENST00000529994 DNAL4O96015 105 aa5.93□□□□□ -1.46
SF3B2-208ENST00000529994 OBSCN-AS1Q96MR7 158 aa5.93□□□□□ -1.46
SF3B2-208ENST00000529994 A0A087WSZ3 146 aa5.92□□□□□ -1.46
SF3B2-208ENST00000529994 A0A1B0GX51 115 aa5.92□□□□□ -1.46
SF3B2-208ENST00000529994 UQCR10Q9UDW1 63 aa5.92□□□□□ -1.46
SF3B2-208ENST00000529994 SS18L2Q9UHA2 77 aa5.92□□□□□ -1.46
SF3B2-208ENST00000529994 GHRHP01286 108 aa5.91□□□□□ -1.46
SF3B2-208ENST00000529994 TEN1Q86WV5 123 aa5.91□□□□□ -1.46
SF3B2-208ENST00000529994 ORMDL1Q9P0S3 153 aa5.9□□□□□ -1.46
SF3B2-208ENST00000529994 COX6CP09669 75 aa5.89□□□□□ -1.47
SF3B2-208ENST00000529994 KRTAP9-8Q9BYQ0 159 aa5.89□□□□□ -1.47
SF3B2-208ENST00000529994 Q96NJ1 140 aa5.88□□□□□ -1.47
SF3B2-208ENST00000529994 SIGMAR1Q99720 223 aa5.88□□□□□ -1.47
SF3B2-208ENST00000529994 SYNE2Q8WXH0 6885 aaKnown RBP5.88□□□□□ -1.47
SF3B2-208ENST00000529994 A0A1W2PNM2 257 aa5.87□□□□□ -1.47
SF3B2-208ENST00000529994 SCGB1C2P0DMR2 95 aa5.87□□□□□ -1.47
SF3B2-208ENST00000529994 ANKRD29Q8N6D5 301 aa5.87□□□□□ -1.47
SF3B2-208ENST00000529994 MACF1Q9UPN3 7388 aaKnown RBP5.87□□□□□ -1.47
SF3B2-208ENST00000529994 ATP11AUNQ6ZP68 121 aa5.85□□□□□ -1.47
SF3B2-208ENST00000529994 KRTAP19-1Q8IUB9 90 aa5.85□□□□□ -1.47
SF3B2-208ENST00000529994 DSCR10P59022 87 aa5.84□□□□□ -1.47
SF3B2-208ENST00000529994 VPS25Q9BRG1 176 aa5.84□□□□□ -1.47
SF3B2-208ENST00000529994 TMEM256-PLSCR3K7ERE1 68 aa5.83□□□□□ -1.48
SF3B2-208ENST00000529994 Q75L30 129 aa5.83□□□□□ -1.48
SF3B2-208ENST00000529994 H3BQ85 93 aa5.82□□□□□ -1.48
SF3B2-208ENST00000529994 TRACP01848 142 aa5.82□□□□□ -1.48
SF3B2-208ENST00000529994 CCKP06307 115 aa5.82□□□□□ -1.48
SF3B2-208ENST00000529994 IGKV4-1P06312 121 aa5.81□□□□□ -1.48
SF3B2-208ENST00000529994 DEFB116Q30KQ4 102 aa5.81□□□□□ -1.48
SF3B2-208ENST00000529994 NAA38Q9BRA0 125 aaKnown RBP5.81□□□□□ -1.48
SF3B2-208ENST00000529994 TRBV7-4A0A0J9YYF1 115 aa5.8□□□□□ -1.48
SF3B2-208ENST00000529994 LCE2BO14633 110 aa5.8□□□□□ -1.48
SF3B2-208ENST00000529994 MT2AP02795 61 aa5.79□□□□□ -1.48
SF3B2-208ENST00000529994 UBE2V1Q13404 147 aa5.79□□□□□ -1.48
SF3B2-208ENST00000529994 M0R143 59 aa5.78□□□□□ -1.48
SF3B2-208ENST00000529994 A8MUU9 505 aa5.77□□□□□ -1.49
SF3B2-208ENST00000529994 C20orf166-AS1Q96NR2 134 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms