RNA–Protein interactions for RNA: ENST00000529873.5

CTNND1-221, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-221ENST00000529873 SPRR1BP22528 89 aa5.18□□□□□ -1.58
CTNND1-221ENST00000529873 TRANK1O15050 2925 aa5.18□□□□□ -1.58
CTNND1-221ENST00000529873 R4GN34 69 aa5.18□□□□□ -1.58
CTNND1-221ENST00000529873 KRTAP25-1Q3LHN0 102 aa5.17□□□□□ -1.58
CTNND1-221ENST00000529873 H1FX-AS1Q4G0G2 97 aa5.17□□□□□ -1.58
CTNND1-221ENST00000529873 ACANP16112 2415 aa5.17□□□□□ -1.58
CTNND1-221ENST00000529873 Q5W150 140 aa5.16□□□□□ -1.58
CTNND1-221ENST00000529873 NDUFAF8A1L188 74 aa5.15□□□□□ -1.59
CTNND1-221ENST00000529873 LINC00472Q9H8W2 130 aa5.14□□□□□ -1.59
CTNND1-221ENST00000529873 MTORP42345 2549 aa5.13□□□□□ -1.59
CTNND1-221ENST00000529873 KRTAP26-1Q6PEX3 210 aa5.13□□□□□ -1.59
CTNND1-221ENST00000529873 FASNP49327 2511 aaKnown RBP5.12□□□□□ -1.59
CTNND1-221ENST00000529873 Q5VSD8 79 aa5.12□□□□□ -1.59
CTNND1-221ENST00000529873 MKI67P46013 3256 aaKnown RBP5.11□□□□□ -1.59
CTNND1-221ENST00000529873 CR1P17927 2039 aa5.11□□□□□ -1.59
CTNND1-221ENST00000529873 KRTAP1-5Q9BYS1 174 aa5.1□□□□□ -1.59
CTNND1-221ENST00000529873 RANBP2P49792 3224 aaKnown RBP5.1□□□□□ -1.59
CTNND1-221ENST00000529873 BRCA2P51587 3418 aa5.09□□□□□ -1.59
CTNND1-221ENST00000529873 EPG5Q9HCE0 2579 aa5.09□□□□□ -1.6
CTNND1-221ENST00000529873 LCE6AA0A183 80 aa5.08□□□□□ -1.6
CTNND1-221ENST00000529873 KRTAP10-1P60331 282 aa5.08□□□□□ -1.6
CTNND1-221ENST00000529873 SPATA8Q6RVD6 105 aa5.08□□□□□ -1.6
CTNND1-221ENST00000529873 PRRC2CQ9Y520 2896 aaKnown RBP5.08□□□□□ -1.6
CTNND1-221ENST00000529873 PLAC4Q8WY50 150 aa5.07□□□□□ -1.6
CTNND1-221ENST00000529873 LAMA3Q16787 3333 aa5.07□□□□□ -1.6
CTNND1-221ENST00000529873 KRTAP10-2P60368 255 aa5.05□□□□□ -1.6
CTNND1-221ENST00000529873 M0QZ58 72 aa5.04□□□□□ -1.6
CTNND1-221ENST00000529873 ADM2Q7Z4H4 148 aa5.03□□□□□ -1.6
CTNND1-221ENST00000529873 Q6ZR54 194 aa5.01□□□□□ -1.61
CTNND1-221ENST00000529873 HECTD1Q9ULT8 2610 aa5□□□□□ -1.61
CTNND1-221ENST00000529873 KRTAP21-3Q3LHN1 58 aa5□□□□□ -1.61
CTNND1-221ENST00000529873 KRTAP4-16G5E9R7 235 aaPredicted RBP5□□□□□ -1.61
CTNND1-221ENST00000529873 NOTCH2NLQ7Z3S9 236 aa5□□□□□ -1.61
CTNND1-221ENST00000529873 C20orf166-AS1Q96NR2 134 aa4.98□□□□□ -1.61
CTNND1-221ENST00000529873 FLG2Q5D862 2391 aaPredicted RBP4.98□□□□□ -1.61
CTNND1-221ENST00000529873 FLNAP21333 2647 aaKnown RBP4.97□□□□□ -1.61
CTNND1-221ENST00000529873 CDH23Q9H251 3354 aa4.96□□□□□ -1.61
CTNND1-221ENST00000529873 PANO1I0J062 215 aa4.96□□□□□ -1.61
CTNND1-221ENST00000529873 ZNF292O60281 2723 aa4.95□□□□□ -1.62
CTNND1-221ENST00000529873 ITPR3Q14573 2671 aa4.95□□□□□ -1.62
CTNND1-221ENST00000529873 KRTAP29-1A8MX34 341 aaPredicted RBP4.94□□□□□ -1.62
CTNND1-221ENST00000529873 RPS29P62273 56 aaKnown RBP4.93□□□□□ -1.62
CTNND1-221ENST00000529873 A8MU10 97 aa4.93□□□□□ -1.62
CTNND1-221ENST00000529873 AKAP13Q12802 2813 aa4.93□□□□□ -1.62
CTNND1-221ENST00000529873 PRUNE2Q8WUY3 3088 aa4.92□□□□□ -1.62
CTNND1-221ENST00000529873 UNC80Q8N2C7 3258 aa4.92□□□□□ -1.62
CTNND1-221ENST00000529873 MGAQ8IWI9 3026 aa4.92□□□□□ -1.62
CTNND1-221ENST00000529873 A8MUU9 505 aa4.9□□□□□ -1.62
CTNND1-221ENST00000529873 HELZ2Q9BYK8 2649 aaKnown RBP4.9□□□□□ -1.63
CTNND1-221ENST00000529873 Q6ZRN7 208 aaPredicted RBP4.87□□□□□ -1.63
CTNND1-221ENST00000529873 SZT2Q5T011 3432 aa4.86□□□□□ -1.63
CTNND1-221ENST00000529873 FLNBO75369 2602 aaKnown RBP4.86□□□□□ -1.63
CTNND1-221ENST00000529873 CFAP46Q8IYW2 2715 aa4.86□□□□□ -1.63
CTNND1-221ENST00000529873 USP24Q9UPU5 2620 aa4.85□□□□□ -1.63
CTNND1-221ENST00000529873 KRTAP11-1Q8IUC1 163 aa4.85□□□□□ -1.63
CTNND1-221ENST00000529873 LAMA2P24043 3122 aaKnown RBP4.85□□□□□ -1.63
CTNND1-221ENST00000529873 CFAP54Q96N23 3096 aa4.84□□□□□ -1.63
CTNND1-221ENST00000529873 XIRP2A4UGR9 3374 aa4.83□□□□□ -1.64
CTNND1-221ENST00000529873 WDFY4Q6ZS81 3184 aa4.82□□□□□ -1.64
CTNND1-221ENST00000529873 KRTAP7-1Q8IUC3 87 aa4.82□□□□□ -1.64
CTNND1-221ENST00000529873 TRIOO75962 3097 aa4.82□□□□□ -1.64
CTNND1-221ENST00000529873 A0A0C4DFX4 3053 aa4.81□□□□□ -1.64
CTNND1-221ENST00000529873 ATRQ13535 2644 aa4.81□□□□□ -1.64
CTNND1-221ENST00000529873 KRTAP13-1Q8IUC0 172 aa4.8□□□□□ -1.64
CTNND1-221ENST00000529873 DNAH14Q0VDD8 3507 aa4.79□□□□□ -1.64
CTNND1-221ENST00000529873 KRTAP13-2Q52LG2 175 aa4.79□□□□□ -1.64
CTNND1-221ENST00000529873 SPTBN5Q9NRC6 3674 aaKnown RBP4.79□□□□□ -1.64
CTNND1-221ENST00000529873 TNP1P09430 55 aa4.78□□□□□ -1.64
CTNND1-221ENST00000529873 C10orf95Q9H7T3 257 aa4.78□□□□□ -1.64
CTNND1-221ENST00000529873 IGSF10Q6WRI0 2623 aa4.77□□□□□ -1.65
CTNND1-221ENST00000529873 MGAM2Q2M2H8 2515 aa4.77□□□□□ -1.65
CTNND1-221ENST00000529873 TNRC18O15417 2968 aaPredicted RBP4.77□□□□□ -1.65
CTNND1-221ENST00000529873 DSPP15924 2871 aaKnown RBP4.75□□□□□ -1.65
CTNND1-221ENST00000529873 LAMA1P25391 3075 aa4.74□□□□□ -1.65
CTNND1-221ENST00000529873 PP632Q6XCG6 107 aa4.74□□□□□ -1.65
CTNND1-221ENST00000529873 MAST4O15021 2626 aa4.74□□□□□ -1.65
CTNND1-221ENST00000529873 VPS13AQ96RL7 3174 aa4.74□□□□□ -1.65
CTNND1-221ENST00000529873 CENPEQ02224 2701 aa4.73□□□□□ -1.65
CTNND1-221ENST00000529873 VCANP13611 3396 aa4.72□□□□□ -1.65
CTNND1-221ENST00000529873 DMBT1Q9UGM3 2413 aaPredicted RBP4.71□□□□□ -1.66
CTNND1-221ENST00000529873 CELSR3Q9NYQ7 3312 aa4.7□□□□□ -1.66
CTNND1-221ENST00000529873 UNC79Q9P2D8 2635 aa4.67□□□□□ -1.66
CTNND1-221ENST00000529873 COL6A3P12111 3177 aa4.67□□□□□ -1.66
CTNND1-221ENST00000529873 FRYQ5TBA9 3013 aa4.66□□□□□ -1.66
CTNND1-221ENST00000529873 TEX15Q9BXT5 2789 aa4.65□□□□□ -1.67
CTNND1-221ENST00000529873 CHD6Q8TD26 2715 aa4.64□□□□□ -1.67
CTNND1-221ENST00000529873 REV3LO60673 3130 aa4.61□□□□□ -1.67
CTNND1-221ENST00000529873 TEP1Q99973 2627 aaKnown RBP4.61□□□□□ -1.67
CTNND1-221ENST00000529873 SETXQ7Z333 2677 aaKnown RBP4.61□□□□□ -1.67
CTNND1-221ENST00000529873 LRBAP50851 2863 aa4.58□□□□□ -1.68
CTNND1-221ENST00000529873 P0C880 135 aa4.58□□□□□ -1.68
CTNND1-221ENST00000529873 GCN1Q92616 2671 aaKnown RBP4.58□□□□□ -1.68
CTNND1-221ENST00000529873 BAHCC1Q9P281 2608 aa4.58□□□□□ -1.68
CTNND1-221ENST00000529873 DMXL2Q8TDJ6 3036 aa4.57□□□□□ -1.68
CTNND1-221ENST00000529873 USP34Q70CQ2 3546 aa4.57□□□□□ -1.68
CTNND1-221ENST00000529873 ATMQ13315 3056 aa4.57□□□□□ -1.68
CTNND1-221ENST00000529873 BOD1L1Q8NFC6 3051 aa4.57□□□□□ -1.68
CTNND1-221ENST00000529873 EYSQ5T1H1 3165 aa4.56□□□□□ -1.68
CTNND1-221ENST00000529873 COL6A5A8TX70 2615 aa4.55□□□□□ -1.68
CTNND1-221ENST00000529873 XP32Q5T750 250 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms