RNA–Protein interactions for RNA: ENST00000527154.5

CHMP4A-203, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-203ENST00000527154 COX7BP24311 80 aa8.22□□□□□ -1.09
CHMP4A-203ENST00000527154 TAL2Q16559 108 aa8.22□□□□□ -1.09
CHMP4A-203ENST00000527154 DEFB105AQ8NG35 78 aa8.22□□□□□ -1.09
CHMP4A-203ENST00000527154 COPS9Q8WXC6 57 aa8.22□□□□□ -1.09
CHMP4A-203ENST00000527154 SPANXDQ9BXN6 97 aa8.22□□□□□ -1.09
CHMP4A-203ENST00000527154 ELOF1P60002 83 aaKnown RBP8.21□□□□□ -1.1
CHMP4A-203ENST00000527154 LITAFQ99732 161 aa8.21□□□□□ -1.1
CHMP4A-203ENST00000527154 LINC00846Q9NV44 126 aa8.21□□□□□ -1.1
CHMP4A-203ENST00000527154 C6orf99Q4VX62 202 aa8.2□□□□□ -1.1
CHMP4A-203ENST00000527154 ATP11AUNQ6ZP68 121 aa8.2□□□□□ -1.1
CHMP4A-203ENST00000527154 TEX49A0A1B0GTD5 131 aa8.19□□□□□ -1.1
CHMP4A-203ENST00000527154 HSBP1L1C9JCN9 74 aa8.19□□□□□ -1.1
CHMP4A-203ENST00000527154 SCGB1D4Q6XE38 83 aa8.18□□□□□ -1.1
CHMP4A-203ENST00000527154 Q6ZVH6 145 aa8.18□□□□□ -1.1
CHMP4A-203ENST00000527154 ANKRD39Q53RE8 183 aa8.17□□□□□ -1.1
CHMP4A-203ENST00000527154 ATOH7Q8N100 152 aa8.17□□□□□ -1.1
CHMP4A-203ENST00000527154 A0A0G2JQZ4 141 aa8.16□□□□□ -1.1
CHMP4A-203ENST00000527154 IFITM1P13164 125 aa8.15□□□□□ -1.1
CHMP4A-203ENST00000527154 KRTAP10-10P60014 251 aa8.15□□□□□ -1.1
CHMP4A-203ENST00000527154 IGLV5-48A0A075B6I7 105 aa8.14□□□□□ -1.11
CHMP4A-203ENST00000527154 TCL1BO95988 128 aa8.13□□□□□ -1.11
CHMP4A-203ENST00000527154 TTTY13Q9BZ97 58 aa8.13□□□□□ -1.11
CHMP4A-203ENST00000527154 TRBV7-6A0A0J9YX20 115 aa8.12□□□□□ -1.11
CHMP4A-203ENST00000527154 A0A1B0GWB2 263 aa8.11□□□□□ -1.11
CHMP4A-203ENST00000527154 SCGB1D1O95968 90 aa8.11□□□□□ -1.11
CHMP4A-203ENST00000527154 PCP2Q8IVA1 136 aa8.11□□□□□ -1.11
CHMP4A-203ENST00000527154 MUC12Q9UKN1 5478 aa8.1□□□□□ -1.11
CHMP4A-203ENST00000527154 OBSCN-AS1Q96MR7 158 aa8.1□□□□□ -1.11
CHMP4A-203ENST00000527154 A6NDN8 102 aa8.08□□□□□ -1.12
CHMP4A-203ENST00000527154 C12orf57Q99622 126 aa8.08□□□□□ -1.12
CHMP4A-203ENST00000527154 C20orf166-AS1Q96NR2 134 aa8.07□□□□□ -1.12
CHMP4A-203ENST00000527154 TRBV20-1A0A075B6N2 111 aa8.06□□□□□ -1.12
CHMP4A-203ENST00000527154 PCP4L1A6NKN8 68 aa8.06□□□□□ -1.12
CHMP4A-203ENST00000527154 SMIM6P0DI80 62 aa8.06□□□□□ -1.12
CHMP4A-203ENST00000527154 MPLKIPQ8TAP9 179 aa8.05□□□□□ -1.12
CHMP4A-203ENST00000527154 A4D1N5 150 aa8.04□□□□□ -1.12
CHMP4A-203ENST00000527154 DLEU1O43261 78 aa8.04□□□□□ -1.12
CHMP4A-203ENST00000527154 COX8AP10176 69 aa8.04□□□□□ -1.12
CHMP4A-203ENST00000527154 MUSTN1Q8IVN3 82 aa8.04□□□□□ -1.12
CHMP4A-203ENST00000527154 NHP2Q9NX24 153 aaKnown RBP8.04□□□□□ -1.12
CHMP4A-203ENST00000527154 TRAV13-2A0A0B4J235 113 aa8.03□□□□□ -1.12
CHMP4A-203ENST00000527154 A8MUU9 505 aa8.03□□□□□ -1.12
CHMP4A-203ENST00000527154 F8WEM9 126 aa8.01□□□□□ -1.13
CHMP4A-203ENST00000527154 VAMP8Q9BV40 100 aa8.01□□□□□ -1.13
CHMP4A-203ENST00000527154 SMIM11BQ8TCY0 68 aa7.99□□□□□ -1.13
CHMP4A-203ENST00000527154 TRBV7-7A0A0K0K1E9 115 aa7.98□□□□□ -1.13
CHMP4A-203ENST00000527154 SPATA45Q537H7 98 aa7.98□□□□□ -1.13
CHMP4A-203ENST00000527154 Q96NJ1 140 aa7.97□□□□□ -1.13
CHMP4A-203ENST00000527154 HIST1H4GQ99525 98 aa7.97□□□□□ -1.13
CHMP4A-203ENST00000527154 KRTAP3-3Q9BYR6 98 aa7.97□□□□□ -1.13
CHMP4A-203ENST00000527154 KRTAP3-2Q9BYR7 98 aa7.97□□□□□ -1.13
CHMP4A-203ENST00000527154 HIGD1BQ9P298 99 aa7.97□□□□□ -1.13
CHMP4A-203ENST00000527154 PAM16Q9Y3D7 125 aa7.97□□□□□ -1.13
CHMP4A-203ENST00000527154 IGFL1Q6UW32 110 aa7.96□□□□□ -1.14
CHMP4A-203ENST00000527154 KRTAP16-1A8MUX0 517 aa7.95□□□□□ -1.14
CHMP4A-203ENST00000527154 VAMP3Q15836 100 aa7.94□□□□□ -1.14
CHMP4A-203ENST00000527154 Q6JHZ5 121 aa7.94□□□□□ -1.14
CHMP4A-203ENST00000527154 CLEC2BQ92478 149 aa7.94□□□□□ -1.14
CHMP4A-203ENST00000527154 HRES1P13985 223 aa7.93□□□□□ -1.14
CHMP4A-203ENST00000527154 KRTAP20-1Q3LI63 56 aa7.93□□□□□ -1.14
CHMP4A-203ENST00000527154 C14orf144Q96I85 54 aa7.93□□□□□ -1.14
CHMP4A-203ENST00000527154 LINC00575Q6W349 94 aa7.92□□□□□ -1.14
CHMP4A-203ENST00000527154 Q6ZQY7 126 aa7.92□□□□□ -1.14
CHMP4A-203ENST00000527154 PYY3Q5JQD4 70 aa7.91□□□□□ -1.14
CHMP4A-203ENST00000527154 FAM236DA0A1B0GTK5 79 aa7.9□□□□□ -1.14
CHMP4A-203ENST00000527154 hADV29S1A0JD25 119 aa7.9□□□□□ -1.14
CHMP4A-203ENST00000527154 FAM236CP0DP71 79 aa7.9□□□□□ -1.14
CHMP4A-203ENST00000527154 TMEM238LA0A1B0GVL6 79 aa7.89□□□□□ -1.15
CHMP4A-203ENST00000527154 A6NJY4 79 aa7.89□□□□□ -1.15
CHMP4A-203ENST00000527154 OCIAD2Q56VL3 154 aa7.89□□□□□ -1.15
CHMP4A-203ENST00000527154 C2orf91Q6ZV80 131 aa7.88□□□□□ -1.15
CHMP4A-203ENST00000527154 A0A0B4J2C4 111 aa7.87□□□□□ -1.15
CHMP4A-203ENST00000527154 BVES-AS1Q5T3Y7 98 aa7.87□□□□□ -1.15
CHMP4A-203ENST00000527154 LST1O00453 97 aa7.86□□□□□ -1.15
CHMP4A-203ENST00000527154 RAB37Q96AX2 223 aa7.86□□□□□ -1.15
CHMP4A-203ENST00000527154 RBM12B-AS1Q9P1G2 102 aa7.86□□□□□ -1.15
CHMP4A-203ENST00000527154 CEND1Q8N111 149 aa7.85□□□□□ -1.15
CHMP4A-203ENST00000527154 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.83□□□□□ -1.16
CHMP4A-203ENST00000527154 NOTCH2NLQ7Z3S9 236 aa7.83□□□□□ -1.16
CHMP4A-203ENST00000527154 SNHG12Q9BXW3 62 aa7.83□□□□□ -1.16
CHMP4A-203ENST00000527154 H3BUT2 72 aa7.82□□□□□ -1.16
CHMP4A-203ENST00000527154 SNCGO76070 127 aa7.82□□□□□ -1.16
CHMP4A-203ENST00000527154 HSD52Q0P140 79 aa7.82□□□□□ -1.16
CHMP4A-203ENST00000527154 UQCR10Q9UDW1 63 aa7.82□□□□□ -1.16
CHMP4A-203ENST00000527154 PPDPFLQ8WWR9 84 aa7.81□□□□□ -1.16
CHMP4A-203ENST00000527154 MDN1Q9NU22 5596 aa7.8□□□□□ -1.16
CHMP4A-203ENST00000527154 H0YGX0 51 aa7.79□□□□□ -1.16
CHMP4A-203ENST00000527154 SS18L2Q9UHA2 77 aa7.79□□□□□ -1.16
CHMP4A-203ENST00000527154 PRO1854Q9UHT4 67 aa7.79□□□□□ -1.16
CHMP4A-203ENST00000527154 TSTD3H0UI37 97 aa7.78□□□□□ -1.16
CHMP4A-203ENST00000527154 A0A1B0GX51 115 aa7.76□□□□□ -1.17
CHMP4A-203ENST00000527154 A8MWP4 228 aa7.76□□□□□ -1.17
CHMP4A-203ENST00000527154 GHRHP01286 108 aa7.76□□□□□ -1.17
CHMP4A-203ENST00000527154 FXYD2P54710 66 aa7.76□□□□□ -1.17
CHMP4A-203ENST00000527154 KMT2DO14686 5537 aa7.74□□□□□ -1.17
CHMP4A-203ENST00000527154 DSCR10P59022 87 aa7.73□□□□□ -1.17
CHMP4A-203ENST00000527154 TEN1Q86WV5 123 aa7.73□□□□□ -1.17
CHMP4A-203ENST00000527154 A0A087WSZ3 146 aa7.72□□□□□ -1.17
CHMP4A-203ENST00000527154 Q8N9P0 234 aaPredicted RBP7.72□□□□□ -1.17
CHMP4A-203ENST00000527154 KRTAP5-9P26371 169 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms