RNA–Protein interactions for RNA: ENST00000526433.1

SSSCA1-202, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-202ENST00000526433 FP248Q71RG6 208 aaPredicted RBP9.18□□□□□ -0.94
SSSCA1-202ENST00000526433 H0YGX0 51 aa9.16□□□□□ -0.94
SSSCA1-202ENST00000526433 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.16□□□□□ -0.94
SSSCA1-202ENST00000526433 TPRXLQ17RH7 258 aa9.15□□□□□ -0.94
SSSCA1-202ENST00000526433 CD164Q04900 197 aa9.14□□□□□ -0.95
SSSCA1-202ENST00000526433 RNF213Q63HN8 5207 aa9.13□□□□□ -0.95
SSSCA1-202ENST00000526433 A0A0G2JQZ4 141 aa9.13□□□□□ -0.95
SSSCA1-202ENST00000526433 F8WEM9 126 aa9.12□□□□□ -0.95
SSSCA1-202ENST00000526433 SNCGO76070 127 aa9.12□□□□□ -0.95
SSSCA1-202ENST00000526433 CDIP1Q9H305 208 aa9.12□□□□□ -0.95
SSSCA1-202ENST00000526433 FAM218AQ96MZ4 157 aa9.11□□□□□ -0.95
SSSCA1-202ENST00000526433 LIMD2Q9BT23 127 aa9.11□□□□□ -0.95
SSSCA1-202ENST00000526433 TSTD3H0UI37 97 aa9.1□□□□□ -0.95
SSSCA1-202ENST00000526433 PPDPFLQ8WWR9 84 aa9.1□□□□□ -0.95
SSSCA1-202ENST00000526433 K7ERJ3 54 aa9.09□□□□□ -0.95
SSSCA1-202ENST00000526433 OCIAD2Q56VL3 154 aa9.09□□□□□ -0.95
SSSCA1-202ENST00000526433 SNHG12Q9BXW3 62 aa9.09□□□□□ -0.95
SSSCA1-202ENST00000526433 TRIAP1O43715 76 aa9.08□□□□□ -0.96
SSSCA1-202ENST00000526433 IGLV8-61A0A075B6I0 122 aa9.07□□□□□ -0.96
SSSCA1-202ENST00000526433 KRTAP13-3Q3SY46 172 aa9.07□□□□□ -0.96
SSSCA1-202ENST00000526433 A0A1B0GX51 115 aa9.06□□□□□ -0.96
SSSCA1-202ENST00000526433 PCP4L1A6NKN8 68 aa9.06□□□□□ -0.96
SSSCA1-202ENST00000526433 PSMB2P49721 201 aa9.06□□□□□ -0.96
SSSCA1-202ENST00000526433 Q6JHZ5 121 aa9.06□□□□□ -0.96
SSSCA1-202ENST00000526433 Q5XG85 94 aa9.04□□□□□ -0.96
SSSCA1-202ENST00000526433 CLEC2BQ92478 149 aa9.04□□□□□ -0.96
SSSCA1-202ENST00000526433 IGFL1Q6UW32 110 aa9.03□□□□□ -0.96
SSSCA1-202ENST00000526433 MUC17Q685J3 4493 aa9.03□□□□□ -0.96
SSSCA1-202ENST00000526433 COX6CP09669 75 aa9.02□□□□□ -0.97
SSSCA1-202ENST00000526433 H3BUT2 72 aa9□□□□□ -0.97
SSSCA1-202ENST00000526433 GHRHP01286 108 aa9□□□□□ -0.97
SSSCA1-202ENST00000526433 NDUFV3P56181 108 aaKnown RBP9□□□□□ -0.97
SSSCA1-202ENST00000526433 FABP2P12104 132 aa8.99□□□□□ -0.97
SSSCA1-202ENST00000526433 C1orf195Q5TG92 126 aa8.99□□□□□ -0.97
SSSCA1-202ENST00000526433 TCL1BO95988 128 aa8.98□□□□□ -0.97
SSSCA1-202ENST00000526433 TRBV7-7A0A0K0K1E9 115 aa8.97□□□□□ -0.97
SSSCA1-202ENST00000526433 M0R143 59 aa8.96□□□□□ -0.98
SSSCA1-202ENST00000526433 DNAL4O96015 105 aa8.96□□□□□ -0.98
SSSCA1-202ENST00000526433 SCGB1C2P0DMR2 95 aa8.96□□□□□ -0.98
SSSCA1-202ENST00000526433 H3BMG7 143 aa8.95□□□□□ -0.98
SSSCA1-202ENST00000526433 ORMDL1Q9P0S3 153 aa8.95□□□□□ -0.98
SSSCA1-202ENST00000526433 H3BQ85 93 aa8.93□□□□□ -0.98
SSSCA1-202ENST00000526433 MUC2Q02817 5179 aa8.92□□□□□ -0.98
SSSCA1-202ENST00000526433 ASB16-AS1Q495Z4 193 aa8.92□□□□□ -0.98
SSSCA1-202ENST00000526433 C9orf92A6NGG3 77 aa8.91□□□□□ -0.98
SSSCA1-202ENST00000526433 XP32Q5T750 250 aa8.91□□□□□ -0.98
SSSCA1-202ENST00000526433 TMEM256-PLSCR3K7ERE1 68 aa8.9□□□□□ -0.98
SSSCA1-202ENST00000526433 TRACP01848 142 aa8.9□□□□□ -0.98
SSSCA1-202ENST00000526433 Q6Q795 121 aa8.9□□□□□ -0.98
SSSCA1-202ENST00000526433 LST1O00453 97 aa8.89□□□□□ -0.99
SSSCA1-202ENST00000526433 TEN1Q86WV5 123 aa8.89□□□□□ -0.99
SSSCA1-202ENST00000526433 SEC61BP60468 96 aaKnown RBP8.88□□□□□ -0.99
SSSCA1-202ENST00000526433 NAA38Q9BRA0 125 aaKnown RBP8.86□□□□□ -0.99
SSSCA1-202ENST00000526433 A0A1B0GV72 72 aa8.85□□□□□ -0.99
SSSCA1-202ENST00000526433 UBE2V1Q13404 147 aa8.85□□□□□ -0.99
SSSCA1-202ENST00000526433 ANKRD29Q8N6D5 301 aa8.85□□□□□ -0.99
SSSCA1-202ENST00000526433 A0A1W2PNM2 257 aa8.84□□□□□ -0.99
SSSCA1-202ENST00000526433 BAALC-AS2P0C853 105 aa8.83□□□□□ -1
SSSCA1-202ENST00000526433 BATFQ16520 125 aa8.83□□□□□ -1
SSSCA1-202ENST00000526433 SS18L2Q9UHA2 77 aa8.83□□□□□ -1
SSSCA1-202ENST00000526433 A0A087WSZ3 146 aa8.82□□□□□ -1
SSSCA1-202ENST00000526433 ATXN8Q156A1 80 aa8.8□□□□□ -1
SSSCA1-202ENST00000526433 A0A0U1RQV1 116 aa8.79□□□□□ -1
SSSCA1-202ENST00000526433 TRBV7-4A0A0J9YYF1 115 aa8.78□□□□□ -1
SSSCA1-202ENST00000526433 KRTAP4-1Q9BYQ7 146 aa8.78□□□□□ -1
SSSCA1-202ENST00000526433 RBM3P98179 157 aaKnown RBP8.77□□□□□ -1.01
SSSCA1-202ENST00000526433 CCKP06307 115 aa8.76□□□□□ -1.01
SSSCA1-202ENST00000526433 PCOTHQ58A44 107 aa8.75□□□□□ -1.01
SSSCA1-202ENST00000526433 Q96NJ1 140 aa8.75□□□□□ -1.01
SSSCA1-202ENST00000526433 FAT4Q6V0I7 4981 aa8.74□□□□□ -1.01
SSSCA1-202ENST00000526433 COL5A1-AS1Q5SY13 56 aa8.74□□□□□ -1.01
SSSCA1-202ENST00000526433 LYRM7Q5U5X0 104 aa8.74□□□□□ -1.01
SSSCA1-202ENST00000526433 C9orf118A6NHY6 69 aa8.73□□□□□ -1.01
SSSCA1-202ENST00000526433 DSCR8Q96T75 97 aa8.73□□□□□ -1.01
SSSCA1-202ENST00000526433 TRBV20-1A0A075B6N2 111 aa8.72□□□□□ -1.01
SSSCA1-202ENST00000526433 TAX1BP3O14907 124 aa8.72□□□□□ -1.01
SSSCA1-202ENST00000526433 RPL37P61927 97 aaKnown RBP8.72□□□□□ -1.01
SSSCA1-202ENST00000526433 OBSCN-AS1Q96MR7 158 aa8.71□□□□□ -1.02
SSSCA1-202ENST00000526433 VPS25Q9BRG1 176 aa8.71□□□□□ -1.02
SSSCA1-202ENST00000526433 C9JAW5 83 aa8.7□□□□□ -1.02
SSSCA1-202ENST00000526433 JMJD7-PLA2G4BH0Y9G9 81 aa8.67□□□□□ -1.02
SSSCA1-202ENST00000526433 A0A1W2PPM0 123 aa8.66□□□□□ -1.02
SSSCA1-202ENST00000526433 IGKV4-1P06312 121 aa8.66□□□□□ -1.02
SSSCA1-202ENST00000526433 SIGMAR1Q99720 223 aa8.66□□□□□ -1.02
SSSCA1-202ENST00000526433 LINC00472Q9H8W2 130 aa8.66□□□□□ -1.02
SSSCA1-202ENST00000526433 DEFB116Q30KQ4 102 aa8.65□□□□□ -1.02
SSSCA1-202ENST00000526433 Q75L30 129 aa8.63□□□□□ -1.03
SSSCA1-202ENST00000526433 LOC110117498A0A087WWA1 95 aa8.62□□□□□ -1.03
SSSCA1-202ENST00000526433 Q6ZQT0 140 aa8.62□□□□□ -1.03
SSSCA1-202ENST00000526433 DSCR10P59022 87 aa8.61□□□□□ -1.03
SSSCA1-202ENST00000526433 C21orf62-AS1Q17RA5 79 aa8.61□□□□□ -1.03
SSSCA1-202ENST00000526433 PDE6GP18545 87 aa8.6□□□□□ -1.03
SSSCA1-202ENST00000526433 LCE2AQ5TA79 106 aaPredicted RBP8.6□□□□□ -1.03
SSSCA1-202ENST00000526433 C14orf132Q9NPU4 83 aa8.6□□□□□ -1.03
SSSCA1-202ENST00000526433 LINC00313P59037 77 aa8.59□□□□□ -1.03
SSSCA1-202ENST00000526433 ATP11AUNQ6ZP68 121 aa8.59□□□□□ -1.03
SSSCA1-202ENST00000526433 A0A1B0GV90 55 aa8.58□□□□□ -1.04
SSSCA1-202ENST00000526433 C20orf166-AS1Q96NR2 134 aa8.58□□□□□ -1.04
SSSCA1-202ENST00000526433 A0A1B0GW54 56 aa8.57□□□□□ -1.04
SSSCA1-202ENST00000526433 H3BT86 120 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms