RNA–Protein interactions for RNA: ENST00000526357.5

CTNND1-213, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,994 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-213ENST00000526357 KRTAP1-5Q9BYS1 174 aa5.49□□□□□ -1.53
CTNND1-213ENST00000526357 KRTAP29-1A8MX34 341 aaPredicted RBP5.48□□□□□ -1.53
CTNND1-213ENST00000526357 CEP295Q9C0D2 2601 aa5.48□□□□□ -1.53
CTNND1-213ENST00000526357 A8MUU9 505 aa5.47□□□□□ -1.53
CTNND1-213ENST00000526357 WDR87Q6ZQQ6 2873 aa5.47□□□□□ -1.53
CTNND1-213ENST00000526357 ACANP16112 2415 aa5.46□□□□□ -1.54
CTNND1-213ENST00000526357 SPTBN4Q9H254 2564 aa5.46□□□□□ -1.54
CTNND1-213ENST00000526357 RPS29P62273 56 aaKnown RBP5.45□□□□□ -1.54
CTNND1-213ENST00000526357 KRTAP4-16G5E9R7 235 aaPredicted RBP5.42□□□□□ -1.54
CTNND1-213ENST00000526357 CHD8Q9HCK8 2581 aa5.42□□□□□ -1.54
CTNND1-213ENST00000526357 A6NN06 94 aa5.42□□□□□ -1.54
CTNND1-213ENST00000526357 A8MU10 97 aa5.41□□□□□ -1.54
CTNND1-213ENST00000526357 A0A087X002 238 aa5.4□□□□□ -1.55
CTNND1-213ENST00000526357 CENPFP49454 3210 aa5.4□□□□□ -1.55
CTNND1-213ENST00000526357 TNP1P09430 55 aa5.4□□□□□ -1.55
CTNND1-213ENST00000526357 SETD2Q9BYW2 2564 aaPredicted RBP5.39□□□□□ -1.55
CTNND1-213ENST00000526357 NDUFAF8A1L188 74 aa5.38□□□□□ -1.55
CTNND1-213ENST00000526357 USP9YO00507 2555 aaPredicted RBP5.38□□□□□ -1.55
CTNND1-213ENST00000526357 NOTCH2NLQ7Z3S9 236 aa5.36□□□□□ -1.55
CTNND1-213ENST00000526357 C10orf95Q9H7T3 257 aa5.35□□□□□ -1.55
CTNND1-213ENST00000526357 MTORP42345 2549 aa5.35□□□□□ -1.55
CTNND1-213ENST00000526357 UTRNP46939 3433 aa5.32□□□□□ -1.56
CTNND1-213ENST00000526357 FASNP49327 2511 aaKnown RBP5.31□□□□□ -1.56
CTNND1-213ENST00000526357 POLQO75417 2590 aa5.28□□□□□ -1.56
CTNND1-213ENST00000526357 PP632Q6XCG6 107 aa5.26□□□□□ -1.57
CTNND1-213ENST00000526357 DNAH12Q6ZR08 3092 aa5.26□□□□□ -1.57
CTNND1-213ENST00000526357 EPG5Q9HCE0 2579 aa5.25□□□□□ -1.57
CTNND1-213ENST00000526357 KRTAP11-1Q8IUC1 163 aa5.23□□□□□ -1.57
CTNND1-213ENST00000526357 Q6ZRN7 208 aaPredicted RBP5.22□□□□□ -1.57
CTNND1-213ENST00000526357 KRTAP13-2Q52LG2 175 aa5.21□□□□□ -1.57
CTNND1-213ENST00000526357 KRTAP13-1Q8IUC0 172 aa5.16□□□□□ -1.58
CTNND1-213ENST00000526357 KRTAP10-8P60410 259 aa5.16□□□□□ -1.58
CTNND1-213ENST00000526357 FLG2Q5D862 2391 aaPredicted RBP5.14□□□□□ -1.59
CTNND1-213ENST00000526357 HECTD1Q9ULT8 2610 aa5.14□□□□□ -1.59
CTNND1-213ENST00000526357 KRTAP7-1Q8IUC3 87 aa5.13□□□□□ -1.59
CTNND1-213ENST00000526357 CHD7Q9P2D1 2997 aa5.12□□□□□ -1.59
CTNND1-213ENST00000526357 CEP350Q5VT06 3117 aa5.11□□□□□ -1.59
CTNND1-213ENST00000526357 MGAM2Q2M2H8 2515 aa5.11□□□□□ -1.59
CTNND1-213ENST00000526357 FLNBO75369 2602 aaKnown RBP5.09□□□□□ -1.59
CTNND1-213ENST00000526357 USP24Q9UPU5 2620 aa5.08□□□□□ -1.6
CTNND1-213ENST00000526357 CHD9Q3L8U1 2897 aa5.07□□□□□ -1.6
CTNND1-213ENST00000526357 HTTP42858 3142 aa5.07□□□□□ -1.6
CTNND1-213ENST00000526357 P0C880 135 aa5.06□□□□□ -1.6
CTNND1-213ENST00000526357 C5orf42Q9H799 3197 aa5.06□□□□□ -1.6
CTNND1-213ENST00000526357 PRO2289Q9P1D8 64 aa5.06□□□□□ -1.6
CTNND1-213ENST00000526357 KRTAP21-3Q3LHN1 58 aa5.04□□□□□ -1.6
CTNND1-213ENST00000526357 DMBT1Q9UGM3 2413 aaPredicted RBP5.04□□□□□ -1.6
CTNND1-213ENST00000526357 A0A1B0GVY2 172 aa5.03□□□□□ -1.6
CTNND1-213ENST00000526357 HELZ2Q9BYK8 2649 aaKnown RBP5.02□□□□□ -1.61
CTNND1-213ENST00000526357 XP32Q5T750 250 aa5.01□□□□□ -1.61
CTNND1-213ENST00000526357 FLNAP21333 2647 aaKnown RBP4.98□□□□□ -1.61
CTNND1-213ENST00000526357 TRANK1O15050 2925 aa4.97□□□□□ -1.61
CTNND1-213ENST00000526357 PRRC2CQ9Y520 2896 aaKnown RBP4.97□□□□□ -1.61
CTNND1-213ENST00000526357 KRTAP10-10P60014 251 aa4.97□□□□□ -1.61
CTNND1-213ENST00000526357 H0YAA0 97 aa4.97□□□□□ -1.61
CTNND1-213ENST00000526357 PCNTO95613 3336 aa4.97□□□□□ -1.61
CTNND1-213ENST00000526357 ITPR3Q14573 2671 aa4.96□□□□□ -1.61
CTNND1-213ENST00000526357 RANBP2P49792 3224 aaKnown RBP4.96□□□□□ -1.62
CTNND1-213ENST00000526357 BPTFQ12830 3046 aa4.95□□□□□ -1.62
CTNND1-213ENST00000526357 TPRXLQ17RH7 258 aa4.93□□□□□ -1.62
CTNND1-213ENST00000526357 CFAP46Q8IYW2 2715 aa4.92□□□□□ -1.62
CTNND1-213ENST00000526357 ZNF292O60281 2723 aa4.91□□□□□ -1.62
CTNND1-213ENST00000526357 MKI67P46013 3256 aaKnown RBP4.9□□□□□ -1.62
CTNND1-213ENST00000526357 ATRQ13535 2644 aa4.9□□□□□ -1.62
CTNND1-213ENST00000526357 LAMA3Q16787 3333 aa4.9□□□□□ -1.63
CTNND1-213ENST00000526357 KRTAP1-4P0C5Y4 121 aa4.88□□□□□ -1.63
CTNND1-213ENST00000526357 NBEAL1Q6ZS30 2694 aa4.87□□□□□ -1.63
CTNND1-213ENST00000526357 STAB1Q9NY15 2570 aa4.86□□□□□ -1.63
CTNND1-213ENST00000526357 MAST4O15021 2626 aa4.85□□□□□ -1.63
CTNND1-213ENST00000526357 BRCA2P51587 3418 aa4.83□□□□□ -1.64
CTNND1-213ENST00000526357 AKAP13Q12802 2813 aa4.82□□□□□ -1.64
CTNND1-213ENST00000526357 BAHCC1Q9P281 2608 aa4.81□□□□□ -1.64
CTNND1-213ENST00000526357 MGAQ8IWI9 3026 aa4.81□□□□□ -1.64
CTNND1-213ENST00000526357 KRTAP13-3Q3SY46 172 aa4.78□□□□□ -1.64
CTNND1-213ENST00000526357 CENPEQ02224 2701 aa4.78□□□□□ -1.64
CTNND1-213ENST00000526357 IGSF10Q6WRI0 2623 aa4.77□□□□□ -1.65
CTNND1-213ENST00000526357 PRUNE2Q8WUY3 3088 aa4.77□□□□□ -1.65
CTNND1-213ENST00000526357 STAB2Q8WWQ8 2551 aa4.74□□□□□ -1.65
CTNND1-213ENST00000526357 TEP1Q99973 2627 aaKnown RBP4.72□□□□□ -1.65
CTNND1-213ENST00000526357 UNC79Q9P2D8 2635 aa4.72□□□□□ -1.65
CTNND1-213ENST00000526357 KRTAP12-2P59991 146 aa4.71□□□□□ -1.65
CTNND1-213ENST00000526357 KRTAP13-4Q3LI77 160 aa4.71□□□□□ -1.65
CTNND1-213ENST00000526357 DSPP15924 2871 aaKnown RBP4.71□□□□□ -1.65
CTNND1-213ENST00000526357 CDH23Q9H251 3354 aa4.71□□□□□ -1.65
CTNND1-213ENST00000526357 WDFY4Q6ZS81 3184 aa4.7□□□□□ -1.66
CTNND1-213ENST00000526357 A0A0C4DFX4 3053 aa4.69□□□□□ -1.66
CTNND1-213ENST00000526357 UNC80Q8N2C7 3258 aa4.68□□□□□ -1.66
CTNND1-213ENST00000526357 TEX15Q9BXT5 2789 aa4.67□□□□□ -1.66
CTNND1-213ENST00000526357 COL6A5A8TX70 2615 aa4.65□□□□□ -1.67
CTNND1-213ENST00000526357 CHD6Q8TD26 2715 aa4.65□□□□□ -1.67
CTNND1-213ENST00000526357 TNRC18O15417 2968 aaPredicted RBP4.64□□□□□ -1.67
CTNND1-213ENST00000526357 XIRP2A4UGR9 3374 aa4.64□□□□□ -1.67
CTNND1-213ENST00000526357 CFAP54Q96N23 3096 aa4.63□□□□□ -1.67
CTNND1-213ENST00000526357 SZT2Q5T011 3432 aa4.63□□□□□ -1.67
CTNND1-213ENST00000526357 KRTAP15-1Q3LI76 137 aa4.62□□□□□ -1.67
CTNND1-213ENST00000526357 SETXQ7Z333 2677 aaKnown RBP4.62□□□□□ -1.67
CTNND1-213ENST00000526357 LAMA2P24043 3122 aaKnown RBP4.61□□□□□ -1.67
CTNND1-213ENST00000526357 GCN1Q92616 2671 aaKnown RBP4.6□□□□□ -1.67
CTNND1-213ENST00000526357 TRIOO75962 3097 aa4.59□□□□□ -1.67
CTNND1-213ENST00000526357 KRTAP12-1P59990 96 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms