RNA–Protein interactions for RNA: ENST00000525902.5

CTNND1-212, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,984 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-212ENST00000525902 KRTAP10-11P60412 298 aa3.83□□□□□ -1.8
CTNND1-212ENST00000525902 PCNTO95613 3336 aa3.83□□□□□ -1.8
CTNND1-212ENST00000525902 UTRNP46939 3433 aa3.83□□□□□ -1.8
CTNND1-212ENST00000525902 C5orf42Q9H799 3197 aa3.83□□□□□ -1.8
CTNND1-212ENST00000525902 TLN2Q9Y4G6 2542 aa3.82□□□□□ -1.8
CTNND1-212ENST00000525902 P0C880 135 aa3.82□□□□□ -1.8
CTNND1-212ENST00000525902 ABCA12Q86UK0 2595 aa3.82□□□□□ -1.8
CTNND1-212ENST00000525902 KRTAP24-1Q3LI83 254 aa3.82□□□□□ -1.8
CTNND1-212ENST00000525902 K7EIL1 84 aa3.82□□□□□ -1.8
CTNND1-212ENST00000525902 WWC2-AS2Q96NR7 200 aa3.81□□□□□ -1.8
CTNND1-212ENST00000525902 ABCA2Q9BZC7 2435 aa3.8□□□□□ -1.8
CTNND1-212ENST00000525902 R4GN34 69 aa3.8□□□□□ -1.8
CTNND1-212ENST00000525902 NOTCH2Q04721 2471 aa3.8□□□□□ -1.8
CTNND1-212ENST00000525902 A0A0C4DFX4 3053 aa3.8□□□□□ -1.8
CTNND1-212ENST00000525902 F8P00451 2351 aa3.79□□□□□ -1.8
CTNND1-212ENST00000525902 MYO18BQ8IUG5 2567 aa3.79□□□□□ -1.8
CTNND1-212ENST00000525902 PRRC2CQ9Y520 2896 aaKnown RBP3.79□□□□□ -1.8
CTNND1-212ENST00000525902 M0QZ58 72 aa3.77□□□□□ -1.81
CTNND1-212ENST00000525902 LRRK2Q5S007 2527 aa3.76□□□□□ -1.81
CTNND1-212ENST00000525902 FLG2Q5D862 2391 aaPredicted RBP3.75□□□□□ -1.81
CTNND1-212ENST00000525902 Q6ZSA8 131 aa3.74□□□□□ -1.81
CTNND1-212ENST00000525902 PKD1L2Q7Z442 2459 aa3.74□□□□□ -1.81
CTNND1-212ENST00000525902 CHD8Q9HCK8 2581 aa3.73□□□□□ -1.81
CTNND1-212ENST00000525902 POLQO75417 2590 aa3.73□□□□□ -1.81
CTNND1-212ENST00000525902 SETD2Q9BYW2 2564 aaPredicted RBP3.73□□□□□ -1.81
CTNND1-212ENST00000525902 C10orf95Q9H7T3 257 aa3.72□□□□□ -1.81
CTNND1-212ENST00000525902 SPTBN4Q9H254 2564 aa3.71□□□□□ -1.81
CTNND1-212ENST00000525902 H0YAA0 97 aa3.7□□□□□ -1.82
CTNND1-212ENST00000525902 JMJD1CQ15652 2540 aa3.7□□□□□ -1.82
CTNND1-212ENST00000525902 MTORP42345 2549 aa3.7□□□□□ -1.82
CTNND1-212ENST00000525902 RPS29P62273 56 aaKnown RBP3.69□□□□□ -1.82
CTNND1-212ENST00000525902 KRTAP13-1Q8IUC0 172 aa3.68□□□□□ -1.82
CTNND1-212ENST00000525902 MKI67P46013 3256 aaKnown RBP3.68□□□□□ -1.82
CTNND1-212ENST00000525902 KRTAP7-1Q8IUC3 87 aa3.67□□□□□ -1.82
CTNND1-212ENST00000525902 ACANP16112 2415 aa3.66□□□□□ -1.82
CTNND1-212ENST00000525902 ZFYVE26Q68DK2 2539 aa3.64□□□□□ -1.83
CTNND1-212ENST00000525902 BRCA2P51587 3418 aa3.64□□□□□ -1.83
CTNND1-212ENST00000525902 RANBP2P49792 3224 aaKnown RBP3.63□□□□□ -1.83
CTNND1-212ENST00000525902 ZNF292O60281 2723 aa3.62□□□□□ -1.83
CTNND1-212ENST00000525902 INE1O15225 51 aa3.62□□□□□ -1.83
CTNND1-212ENST00000525902 EPG5Q9HCE0 2579 aa3.62□□□□□ -1.83
CTNND1-212ENST00000525902 KRTAP1-5Q9BYS1 174 aa3.61□□□□□ -1.83
CTNND1-212ENST00000525902 TNP1P09430 55 aa3.61□□□□□ -1.83
CTNND1-212ENST00000525902 CFAP54Q96N23 3096 aa3.6□□□□□ -1.83
CTNND1-212ENST00000525902 KRTAP3-3Q9BYR6 98 aa3.6□□□□□ -1.83
CTNND1-212ENST00000525902 KRTAP3-2Q9BYR7 98 aa3.6□□□□□ -1.83
CTNND1-212ENST00000525902 PRO2289Q9P1D8 64 aa3.6□□□□□ -1.83
CTNND1-212ENST00000525902 LAMA2P24043 3122 aaKnown RBP3.59□□□□□ -1.84
CTNND1-212ENST00000525902 FLNAP21333 2647 aaKnown RBP3.59□□□□□ -1.84
CTNND1-212ENST00000525902 LAMA3Q16787 3333 aa3.57□□□□□ -1.84
CTNND1-212ENST00000525902 MGAQ8IWI9 3026 aa3.57□□□□□ -1.84
CTNND1-212ENST00000525902 KRTAP15-1Q3LI76 137 aa3.57□□□□□ -1.84
CTNND1-212ENST00000525902 FASNP49327 2511 aaKnown RBP3.57□□□□□ -1.84
CTNND1-212ENST00000525902 AKAP13Q12802 2813 aa3.56□□□□□ -1.84
CTNND1-212ENST00000525902 KRTAP23-1A1A580 65 aa3.55□□□□□ -1.84
CTNND1-212ENST00000525902 ITPR3Q14573 2671 aa3.55□□□□□ -1.84
CTNND1-212ENST00000525902 TRIOO75962 3097 aa3.55□□□□□ -1.84
CTNND1-212ENST00000525902 UNC80Q8N2C7 3258 aa3.54□□□□□ -1.84
CTNND1-212ENST00000525902 KRTAP13-3Q3SY46 172 aa3.53□□□□□ -1.84
CTNND1-212ENST00000525902 KRTAP10-8P60410 259 aa3.52□□□□□ -1.85
CTNND1-212ENST00000525902 DMBT1Q9UGM3 2413 aaPredicted RBP3.52□□□□□ -1.85
CTNND1-212ENST00000525902 CDH23Q9H251 3354 aa3.52□□□□□ -1.85
CTNND1-212ENST00000525902 TPRXLQ17RH7 258 aa3.52□□□□□ -1.85
CTNND1-212ENST00000525902 DSPP15924 2871 aaKnown RBP3.52□□□□□ -1.85
CTNND1-212ENST00000525902 DNAH14Q0VDD8 3507 aa3.51□□□□□ -1.85
CTNND1-212ENST00000525902 FRYQ5TBA9 3013 aa3.51□□□□□ -1.85
CTNND1-212ENST00000525902 LAMA1P25391 3075 aa3.5□□□□□ -1.85
CTNND1-212ENST00000525902 Q6ZRN7 208 aaPredicted RBP3.5□□□□□ -1.85
CTNND1-212ENST00000525902 CHD6Q8TD26 2715 aa3.5□□□□□ -1.85
CTNND1-212ENST00000525902 VPS13AQ96RL7 3174 aa3.5□□□□□ -1.85
CTNND1-212ENST00000525902 SMR3BP02814 79 aaPredicted RBP3.48□□□□□ -1.85
CTNND1-212ENST00000525902 KRTAP13-2Q52LG2 175 aa3.48□□□□□ -1.85
CTNND1-212ENST00000525902 NBEAQ8NFP9 2946 aa3.48□□□□□ -1.85
CTNND1-212ENST00000525902 WDFY4Q6ZS81 3184 aa3.47□□□□□ -1.85
CTNND1-212ENST00000525902 ATRQ13535 2644 aa3.47□□□□□ -1.85
CTNND1-212ENST00000525902 GCN1Q92616 2671 aaKnown RBP3.46□□□□□ -1.86
CTNND1-212ENST00000525902 TNRC18O15417 2968 aaPredicted RBP3.46□□□□□ -1.86
CTNND1-212ENST00000525902 VCANP13611 3396 aa3.45□□□□□ -1.86
CTNND1-212ENST00000525902 SZT2Q5T011 3432 aa3.45□□□□□ -1.86
CTNND1-212ENST00000525902 PRUNE2Q8WUY3 3088 aa3.45□□□□□ -1.86
CTNND1-212ENST00000525902 XIRP2A4UGR9 3374 aa3.44□□□□□ -1.86
CTNND1-212ENST00000525902 KRTAP10-1P60331 282 aa3.43□□□□□ -1.86
CTNND1-212ENST00000525902 TEX15Q9BXT5 2789 aa3.43□□□□□ -1.86
CTNND1-212ENST00000525902 ZZEF1O43149 2961 aa3.43□□□□□ -1.86
CTNND1-212ENST00000525902 HECTD1Q9ULT8 2610 aa3.43□□□□□ -1.86
CTNND1-212ENST00000525902 KALRNO60229 2985 aa3.42□□□□□ -1.86
CTNND1-212ENST00000525902 CFAP46Q8IYW2 2715 aa3.41□□□□□ -1.86
CTNND1-212ENST00000525902 IGSF10Q6WRI0 2623 aa3.41□□□□□ -1.86
CTNND1-212ENST00000525902 UNC79Q9P2D8 2635 aa3.41□□□□□ -1.86
CTNND1-212ENST00000525902 LRBAP50851 2863 aa3.4□□□□□ -1.86
CTNND1-212ENST00000525902 SPTBN5Q9NRC6 3674 aaKnown RBP3.4□□□□□ -1.87
CTNND1-212ENST00000525902 KRTAP10-2P60368 255 aa3.4□□□□□ -1.87
CTNND1-212ENST00000525902 CENPEQ02224 2701 aa3.4□□□□□ -1.87
CTNND1-212ENST00000525902 KRTAP17-1Q9BYP8 105 aa3.4□□□□□ -1.87
CTNND1-212ENST00000525902 USP24Q9UPU5 2620 aa3.4□□□□□ -1.87
CTNND1-212ENST00000525902 CELSR3Q9NYQ7 3312 aa3.4□□□□□ -1.87
CTNND1-212ENST00000525902 HELZ2Q9BYK8 2649 aaKnown RBP3.39□□□□□ -1.87
CTNND1-212ENST00000525902 ADGRG4Q8IZF6 3080 aa3.39□□□□□ -1.87
CTNND1-212ENST00000525902 SETXQ7Z333 2677 aaKnown RBP3.39□□□□□ -1.87
CTNND1-212ENST00000525902 NBEAL2Q6ZNJ1 2754 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms