RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 PRUNE2Q8WUY3 3088 aa8.44□□□□□ -1.06
LRRK1-202ENST00000525284 TNP2Q05952 138 aa8.44□□□□□ -1.06
LRRK1-202ENST00000525284 CFAP54Q96N23 3096 aa8.43□□□□□ -1.06
LRRK1-202ENST00000525284 SPATA8Q6RVD6 105 aa8.42□□□□□ -1.06
LRRK1-202ENST00000525284 SZT2Q5T011 3432 aa8.42□□□□□ -1.06
LRRK1-202ENST00000525284 ANKRD11Q6UB99 2663 aaPredicted RBP8.41□□□□□ -1.06
LRRK1-202ENST00000525284 KRTAP10-3P60369 221 aa8.41□□□□□ -1.06
LRRK1-202ENST00000525284 CEP295Q9C0D2 2601 aa8.4□□□□□ -1.06
LRRK1-202ENST00000525284 C20orf166-AS1Q96NR2 134 aa8.39□□□□□ -1.07
LRRK1-202ENST00000525284 A0A096LNT2 108 aa8.38□□□□□ -1.07
LRRK1-202ENST00000525284 CELSR3Q9NYQ7 3312 aa8.36□□□□□ -1.07
LRRK1-202ENST00000525284 ADM2Q7Z4H4 148 aa8.34□□□□□ -1.07
LRRK1-202ENST00000525284 TRIOO75962 3097 aa8.33□□□□□ -1.08
LRRK1-202ENST00000525284 FLG2Q5D862 2391 aaPredicted RBP8.33□□□□□ -1.08
LRRK1-202ENST00000525284 TRANK1O15050 2925 aa8.31□□□□□ -1.08
LRRK1-202ENST00000525284 Q8NDZ9 215 aa8.31□□□□□ -1.08
LRRK1-202ENST00000525284 OXTP01178 125 aa8.3□□□□□ -1.08
LRRK1-202ENST00000525284 NDUFAF8A1L188 74 aa8.3□□□□□ -1.08
LRRK1-202ENST00000525284 VCANP13611 3396 aa8.29□□□□□ -1.08
LRRK1-202ENST00000525284 SEC61BP60468 96 aaKnown RBP8.28□□□□□ -1.08
LRRK1-202ENST00000525284 LINC00472Q9H8W2 130 aa8.28□□□□□ -1.08
LRRK1-202ENST00000525284 CHD8Q9HCK8 2581 aa8.27□□□□□ -1.09
LRRK1-202ENST00000525284 ANKRD17O75179 2603 aaKnown RBP8.26□□□□□ -1.09
LRRK1-202ENST00000525284 SPTBN4Q9H254 2564 aa8.25□□□□□ -1.09
LRRK1-202ENST00000525284 ASB16-AS1Q495Z4 193 aa8.24□□□□□ -1.09
LRRK1-202ENST00000525284 LAMA1P25391 3075 aa8.23□□□□□ -1.09
LRRK1-202ENST00000525284 POLQO75417 2590 aa8.23□□□□□ -1.09
LRRK1-202ENST00000525284 KRTAP25-1Q3LHN0 102 aa8.23□□□□□ -1.09
LRRK1-202ENST00000525284 USP9YO00507 2555 aaPredicted RBP8.22□□□□□ -1.09
LRRK1-202ENST00000525284 MTORP42345 2549 aa8.21□□□□□ -1.09
LRRK1-202ENST00000525284 PLAC8Q9NZF1 115 aa8.21□□□□□ -1.1
LRRK1-202ENST00000525284 KRTAP26-1Q6PEX3 210 aa8.19□□□□□ -1.1
LRRK1-202ENST00000525284 SPEGQ15772 3267 aa8.18□□□□□ -1.1
LRRK1-202ENST00000525284 VPS13AQ96RL7 3174 aa8.17□□□□□ -1.1
LRRK1-202ENST00000525284 SPTBN5Q9NRC6 3674 aaKnown RBP8.17□□□□□ -1.1
LRRK1-202ENST00000525284 SPRR1AP35321 89 aa8.15□□□□□ -1.11
LRRK1-202ENST00000525284 A8MU10 97 aa8.14□□□□□ -1.11
LRRK1-202ENST00000525284 Q6ZR54 194 aa8.13□□□□□ -1.11
LRRK1-202ENST00000525284 WDFY4Q6ZS81 3184 aa8.13□□□□□ -1.11
LRRK1-202ENST00000525284 PANO1I0J062 215 aa8.1□□□□□ -1.11
LRRK1-202ENST00000525284 SPRR1BP22528 89 aa8.1□□□□□ -1.11
LRRK1-202ENST00000525284 C10orf95Q9H7T3 257 aa8.09□□□□□ -1.11
LRRK1-202ENST00000525284 MYO15AQ9UKN7 3530 aa8.08□□□□□ -1.12
LRRK1-202ENST00000525284 MGAQ8IWI9 3026 aa8.08□□□□□ -1.12
LRRK1-202ENST00000525284 USP34Q70CQ2 3546 aa8.08□□□□□ -1.12
LRRK1-202ENST00000525284 A6NN06 94 aa8.08□□□□□ -1.12
LRRK1-202ENST00000525284 COL6A3P12111 3177 aa8.07□□□□□ -1.12
LRRK1-202ENST00000525284 EYSQ5T1H1 3165 aa8.05□□□□□ -1.12
LRRK1-202ENST00000525284 USP24Q9UPU5 2620 aa8.05□□□□□ -1.12
LRRK1-202ENST00000525284 KRTAP1-3Q8IUG1 177 aa8□□□□□ -1.13
LRRK1-202ENST00000525284 FREM2Q5SZK8 3169 aa8□□□□□ -1.13
LRRK1-202ENST00000525284 A8MUU9 505 aa7.99□□□□□ -1.13
LRRK1-202ENST00000525284 FRYLO94915 3013 aa7.97□□□□□ -1.13
LRRK1-202ENST00000525284 FRYQ5TBA9 3013 aa7.94□□□□□ -1.14
LRRK1-202ENST00000525284 MGAM2Q2M2H8 2515 aa7.93□□□□□ -1.14
LRRK1-202ENST00000525284 REV3LO60673 3130 aa7.92□□□□□ -1.14
LRRK1-202ENST00000525284 KRTAP29-1A8MX34 341 aaPredicted RBP7.92□□□□□ -1.14
LRRK1-202ENST00000525284 KRTAP10-1P60331 282 aa7.92□□□□□ -1.14
LRRK1-202ENST00000525284 DSPP15924 2871 aaKnown RBP7.91□□□□□ -1.14
LRRK1-202ENST00000525284 KRTAP1-1Q07627 177 aa7.91□□□□□ -1.14
LRRK1-202ENST00000525284 TNP1P09430 55 aa7.9□□□□□ -1.15
LRRK1-202ENST00000525284 A0A087X002 238 aa7.89□□□□□ -1.15
LRRK1-202ENST00000525284 NOTCH2NLQ7Z3S9 236 aa7.89□□□□□ -1.15
LRRK1-202ENST00000525284 AKAP13Q12802 2813 aa7.88□□□□□ -1.15
LRRK1-202ENST00000525284 KRTAP1-5Q9BYS1 174 aa7.88□□□□□ -1.15
LRRK1-202ENST00000525284 KRTAP10-2P60368 255 aa7.87□□□□□ -1.15
LRRK1-202ENST00000525284 DMBT1Q9UGM3 2413 aaPredicted RBP7.87□□□□□ -1.15
LRRK1-202ENST00000525284 FASNP49327 2511 aaKnown RBP7.86□□□□□ -1.15
LRRK1-202ENST00000525284 BOD1L1Q8NFC6 3051 aa7.83□□□□□ -1.16
LRRK1-202ENST00000525284 NBEAQ8NFP9 2946 aa7.82□□□□□ -1.16
LRRK1-202ENST00000525284 EPG5Q9HCE0 2579 aa7.81□□□□□ -1.16
LRRK1-202ENST00000525284 WDFY3Q8IZQ1 3526 aa7.79□□□□□ -1.16
LRRK1-202ENST00000525284 KRTAP11-1Q8IUC1 163 aa7.77□□□□□ -1.16
LRRK1-202ENST00000525284 KALRNO60229 2985 aa7.76□□□□□ -1.17
LRRK1-202ENST00000525284 KRTAP4-16G5E9R7 235 aaPredicted RBP7.74□□□□□ -1.17
LRRK1-202ENST00000525284 FLNAP21333 2647 aaKnown RBP7.73□□□□□ -1.17
LRRK1-202ENST00000525284 LRBAP50851 2863 aa7.73□□□□□ -1.17
LRRK1-202ENST00000525284 LCE6AA0A183 80 aa7.72□□□□□ -1.17
LRRK1-202ENST00000525284 ATRQ13535 2644 aa7.69□□□□□ -1.18
LRRK1-202ENST00000525284 ITPR3Q14573 2671 aa7.68□□□□□ -1.18
LRRK1-202ENST00000525284 CFAP47Q6ZTR5 3102 aa7.67□□□□□ -1.18
LRRK1-202ENST00000525284 ADGRG4Q8IZF6 3080 aa7.67□□□□□ -1.18
LRRK1-202ENST00000525284 HECTD1Q9ULT8 2610 aa7.66□□□□□ -1.18
LRRK1-202ENST00000525284 ZNF292O60281 2723 aa7.65□□□□□ -1.19
LRRK1-202ENST00000525284 CENPEQ02224 2701 aa7.64□□□□□ -1.19
LRRK1-202ENST00000525284 STAB2Q8WWQ8 2551 aa7.63□□□□□ -1.19
LRRK1-202ENST00000525284 P0C880 135 aa7.63□□□□□ -1.19
LRRK1-202ENST00000525284 KRTAP10-8P60410 259 aa7.63□□□□□ -1.19
LRRK1-202ENST00000525284 MAP1AP78559 2803 aaPredicted RBP7.62□□□□□ -1.19
LRRK1-202ENST00000525284 A0A1B0GVY2 172 aa7.62□□□□□ -1.19
LRRK1-202ENST00000525284 LOC400499M0QZD8 3231 aa7.61□□□□□ -1.19
LRRK1-202ENST00000525284 PP632Q6XCG6 107 aa7.6□□□□□ -1.19
LRRK1-202ENST00000525284 STAB1Q9NY15 2570 aa7.58□□□□□ -1.2
LRRK1-202ENST00000525284 ZZEF1O43149 2961 aa7.56□□□□□ -1.2
LRRK1-202ENST00000525284 ZFHX4Q86UP3 3567 aa7.56□□□□□ -1.2
LRRK1-202ENST00000525284 NBEAL1Q6ZS30 2694 aa7.55□□□□□ -1.2
LRRK1-202ENST00000525284 MAST4O15021 2626 aa7.55□□□□□ -1.2
LRRK1-202ENST00000525284 ASPMQ8IZT6 3477 aa7.55□□□□□ -1.2
LRRK1-202ENST00000525284 CFAP46Q8IYW2 2715 aa7.54□□□□□ -1.2
LRRK1-202ENST00000525284 DMXL2Q8TDJ6 3036 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 165.8 ms