RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 ORMDL3Q8N138 153 aa0.61□□□□□ -2.31
CD44-212ENST00000524922 MAP1LC3CQ9BXW4 147 aa0.61□□□□□ -2.31
CD44-212ENST00000524922 NXT2Q9NPJ8 142 aaKnown RBP0.61□□□□□ -2.31
CD44-212ENST00000524922 OSTCQ9NRP0 149 aa0.61□□□□□ -2.31
CD44-212ENST00000524922 NHP2Q9NX24 153 aaKnown RBP0.61□□□□□ -2.31
CD44-212ENST00000524922 CDKN2A-AS1Q9UH64 79 aa0.61□□□□□ -2.31
CD44-212ENST00000524922 NAT8BQ9UHF3 227 aa0.61□□□□□ -2.31
CD44-212ENST00000524922 TRAV23DV6A0A075B6W5 121 aa0.6□□□□□ -2.31
CD44-212ENST00000524922 TRAV13-2A0A0B4J235 113 aa0.6□□□□□ -2.31
CD44-212ENST00000524922 TRBV7-7A0A0K0K1E9 115 aa0.6□□□□□ -2.31
CD44-212ENST00000524922 TRBV10-3A0A0K0K1G6 114 aa0.6□□□□□ -2.31
CD44-212ENST00000524922 A0A1B0GXF2 115 aa0.6□□□□□ -2.31
CD44-212ENST00000524922 C9JQL5 133 aa0.6□□□□□ -2.31
CD44-212ENST00000524922 PLA2G10O15496 165 aa0.6□□□□□ -2.31
CD44-212ENST00000524922 GIPP09681 153 aaPredicted RBP0.6□□□□□ -2.31
CD44-212ENST00000524922 DDTP30046 118 aa0.6□□□□□ -2.31
CD44-212ENST00000524922 CKS2P33552 79 aa0.6□□□□□ -2.31
CD44-212ENST00000524922 NMUP48645 174 aa0.6□□□□□ -2.31
CD44-212ENST00000524922 ELOF1P60002 83 aaKnown RBP0.6□□□□□ -2.31
CD44-212ENST00000524922 LSM3P62310 102 aaKnown RBP0.6□□□□□ -2.31
CD44-212ENST00000524922 RPL39P62891 51 aaKnown RBP0.6□□□□□ -2.31
CD44-212ENST00000524922 FAM74A3Q4VXF1 159 aa0.6□□□□□ -2.31
CD44-212ENST00000524922 CAMK2N1Q7Z7J9 78 aa0.6□□□□□ -2.31
CD44-212ENST00000524922 PRR15Q8IV56 129 aa0.6□□□□□ -2.31
CD44-212ENST00000524922 KCNRGQ8N5I3 272 aa0.6□□□□□ -2.31
CD44-212ENST00000524922 LINC00469Q8N7U9 141 aa0.6□□□□□ -2.31
CD44-212ENST00000524922 Q8N8P6 123 aa0.6□□□□□ -2.31
CD44-212ENST00000524922 ST20-AS1Q8NBB2 130 aa0.6□□□□□ -2.31
CD44-212ENST00000524922 CLEC2BQ92478 149 aa0.6□□□□□ -2.31
CD44-212ENST00000524922 TOMM6Q96B49 74 aa0.6□□□□□ -2.31
CD44-212ENST00000524922 DSCR8Q96T75 97 aa0.6□□□□□ -2.31
CD44-212ENST00000524922 TPPP3Q9BW30 176 aa0.6□□□□□ -2.31
CD44-212ENST00000524922 TOMM7Q9P0U1 55 aa0.6□□□□□ -2.31
CD44-212ENST00000524922 MUC21A0A140T8X8 626 aa0.59□□□□□ -2.31
CD44-212ENST00000524922 FAM240BA0A1B0GVZ2 78 aa0.59□□□□□ -2.31
CD44-212ENST00000524922 A0A1B0GWB2 263 aa0.59□□□□□ -2.31
CD44-212ENST00000524922 SMIM27A0A1W2PRY6 76 aa0.59□□□□□ -2.31
CD44-212ENST00000524922 H0YAA0 97 aa0.59□□□□□ -2.31
CD44-212ENST00000524922 LST1O00453 97 aa0.59□□□□□ -2.31
CD44-212ENST00000524922 GATCO43716 136 aaKnown RBP0.59□□□□□ -2.31
CD44-212ENST00000524922 PMVKQ15126 192 aa0.59□□□□□ -2.31
CD44-212ENST00000524922 H1FX-AS1Q4G0G2 97 aa0.59□□□□□ -2.31
CD44-212ENST00000524922 MEIG1Q5JSS6 88 aa0.59□□□□□ -2.31
CD44-212ENST00000524922 SOSTDC1Q6X4U4 206 aa0.59□□□□□ -2.31
CD44-212ENST00000524922 OBSCN-AS1Q96MR7 158 aa0.59□□□□□ -2.31
CD44-212ENST00000524922 SPANXDQ9BXN6 97 aa0.59□□□□□ -2.31
CD44-212ENST00000524922 CHTOPQ9Y3Y2 248 aaKnown RBP0.59□□□□□ -2.31
CD44-212ENST00000524922 TRAV12-1A0A0B4J245 112 aa0.58□□□□□ -2.32
CD44-212ENST00000524922 D6R8Y8 96 aa0.58□□□□□ -2.32
CD44-212ENST00000524922 C8orf87E5RJ46 101 aa0.58□□□□□ -2.32
CD44-212ENST00000524922 K7EN84 100 aa0.58□□□□□ -2.32
CD44-212ENST00000524922 SCO1O75880 301 aa0.58□□□□□ -2.32
CD44-212ENST00000524922 ATP6V1G2O95670 118 aa0.58□□□□□ -2.32
CD44-212ENST00000524922 ZNF22P17026 224 aaPredicted RBP0.58□□□□□ -2.32
CD44-212ENST00000524922 RAB14P61106 215 aa0.58□□□□□ -2.32
CD44-212ENST00000524922 KLKP1Q107X0 134 aa0.58□□□□□ -2.32
CD44-212ENST00000524922 COX19Q49B96 90 aa0.58□□□□□ -2.32
CD44-212ENST00000524922 RPL7L1Q6DKI1 246 aaKnown RBP0.58□□□□□ -2.32
CD44-212ENST00000524922 PCP2Q8IVA1 136 aa0.58□□□□□ -2.32
CD44-212ENST00000524922 BOD1L2Q8IYS8 172 aa0.58□□□□□ -2.32
CD44-212ENST00000524922 COPS9Q8WXC6 57 aa0.58□□□□□ -2.32
CD44-212ENST00000524922 S100ZQ8WXG8 99 aa0.58□□□□□ -2.32
CD44-212ENST00000524922 RAB37Q96AX2 223 aa0.58□□□□□ -2.32
CD44-212ENST00000524922 Q96NJ1 140 aa0.58□□□□□ -2.32
CD44-212ENST00000524922 SMIM3Q9BZL3 60 aa0.58□□□□□ -2.32
CD44-212ENST00000524922 MAP1LC3AQ9H492 121 aa0.58□□□□□ -2.32
CD44-212ENST00000524922 CST9LQ9H4G1 147 aa0.58□□□□□ -2.32
CD44-212ENST00000524922 MED9Q9NWA0 146 aa0.58□□□□□ -2.32
CD44-212ENST00000524922 SPANXCQ9NY87 97 aa0.58□□□□□ -2.32
CD44-212ENST00000524922 V9GYV3 84 aa0.58□□□□□ -2.32
CD44-212ENST00000524922 MYMXA0A1B0GTQ4 84 aa0.57□□□□□ -2.32
CD44-212ENST00000524922 A0A1W2PNM2 257 aa0.57□□□□□ -2.32
CD44-212ENST00000524922 C11orf86A6NJI1 115 aa0.57□□□□□ -2.32
CD44-212ENST00000524922 F8WEM9 126 aa0.57□□□□□ -2.32
CD44-212ENST00000524922 SSNA1O43805 119 aa0.57□□□□□ -2.32
CD44-212ENST00000524922 TIMM17BO60830 172 aa0.57□□□□□ -2.32
CD44-212ENST00000524922 NPYP01303 97 aa0.57□□□□□ -2.32
CD44-212ENST00000524922 HBDP02042 147 aa0.57□□□□□ -2.32
CD44-212ENST00000524922 DEFA1P59665 94 aa0.57□□□□□ -2.32
CD44-212ENST00000524922 DEFA3P59666 94 aa0.57□□□□□ -2.32
CD44-212ENST00000524922 RPL23P62829 140 aaKnown RBP0.57□□□□□ -2.32
CD44-212ENST00000524922 MT1XP80297 61 aa0.57□□□□□ -2.32
CD44-212ENST00000524922 FABP9Q0Z7S8 132 aa0.57□□□□□ -2.32
CD44-212ENST00000524922 KRTAP13-4Q3LI77 160 aa0.57□□□□□ -2.32
CD44-212ENST00000524922 OCIAD2Q56VL3 154 aa0.57□□□□□ -2.32
CD44-212ENST00000524922 TEN1Q86WV5 123 aa0.57□□□□□ -2.32
CD44-212ENST00000524922 BAGE3Q86Y29 109 aa0.57□□□□□ -2.32
CD44-212ENST00000524922 TCTE3Q8IZS6 198 aa0.57□□□□□ -2.32
CD44-212ENST00000524922 PRELID3AQ96N28 172 aa0.57□□□□□ -2.32
CD44-212ENST00000524922 MIEN1Q9BRT3 115 aa0.57□□□□□ -2.32
CD44-212ENST00000524922 BATF3Q9NR55 127 aa0.57□□□□□ -2.32
CD44-212ENST00000524922 A0A0U1RRA0 63 aa0.56□□□□□ -2.32
CD44-212ENST00000524922 A0A1B0GW54 56 aa0.56□□□□□ -2.32
CD44-212ENST00000524922 TMEM223A0PJW6 202 aa0.56□□□□□ -2.32
CD44-212ENST00000524922 H3BQ85 93 aa0.56□□□□□ -2.32
CD44-212ENST00000524922 COX7BP24311 80 aa0.56□□□□□ -2.32
CD44-212ENST00000524922 SPINK7P58062 85 aa0.56□□□□□ -2.32
CD44-212ENST00000524922 LINC00158P58513 81 aa0.56□□□□□ -2.32
CD44-212ENST00000524922 LINC00313P59037 77 aa0.56□□□□□ -2.32
CD44-212ENST00000524922 RHEBQ15382 184 aa0.56□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms