RNA–Protein interactions for RNA: ENST00000524306.1

CLINT1-208, Transcript of clathrin interactor 1, humanhuman

TSL 1 (best)

Gene CLINT1, Length 2,905 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-208ENST00000524306 TRRAPQ9Y4A5 3859 aa3.45□□□□□ -1.86
CLINT1-208ENST00000524306 DNAH7Q8WXX0 4024 aa3.44□□□□□ -1.86
CLINT1-208ENST00000524306 DNAH9Q9NYC9 4486 aa3.44□□□□□ -1.86
CLINT1-208ENST00000524306 NBEAL2Q6ZNJ1 2754 aa3.44□□□□□ -1.86
CLINT1-208ENST00000524306 A0A096LNI7 61 aa3.43□□□□□ -1.86
CLINT1-208ENST00000524306 C9orf163Q8N9P6 203 aa3.43□□□□□ -1.86
CLINT1-208ENST00000524306 KRTAP17-1Q9BYP8 105 aa3.43□□□□□ -1.86
CLINT1-208ENST00000524306 KRTAP1-5Q9BYS1 174 aa3.43□□□□□ -1.86
CLINT1-208ENST00000524306 LRCOL1A6NCL2 159 aa3.43□□□□□ -1.86
CLINT1-208ENST00000524306 F8WEM9 126 aa3.43□□□□□ -1.86
CLINT1-208ENST00000524306 C1orf195Q5TG92 126 aa3.43□□□□□ -1.86
CLINT1-208ENST00000524306 A0A0U1RQV1 116 aa3.43□□□□□ -1.86
CLINT1-208ENST00000524306 UBE2BP63146 152 aa3.43□□□□□ -1.86
CLINT1-208ENST00000524306 DEFB105AQ8NG35 78 aa3.43□□□□□ -1.86
CLINT1-208ENST00000524306 RPL37AP61513 92 aaKnown RBP3.42□□□□□ -1.86
CLINT1-208ENST00000524306 Q6ZRN7 208 aaPredicted RBP3.42□□□□□ -1.86
CLINT1-208ENST00000524306 ST20-AS1Q8NBB2 130 aa3.42□□□□□ -1.86
CLINT1-208ENST00000524306 A0A1W2PNN7 141 aa3.42□□□□□ -1.86
CLINT1-208ENST00000524306 TMEM254Q8TBM7 123 aa3.42□□□□□ -1.86
CLINT1-208ENST00000524306 LINC00476Q8WZB0 136 aa3.42□□□□□ -1.86
CLINT1-208ENST00000524306 KRTAP4-9Q9BYQ8 210 aa3.42□□□□□ -1.86
CLINT1-208ENST00000524306 DSCR10P59022 87 aa3.41□□□□□ -1.86
CLINT1-208ENST00000524306 PKD1L1Q8TDX9 2849 aa3.41□□□□□ -1.86
CLINT1-208ENST00000524306 NBDYA0A0U1RRE5 68 aa3.41□□□□□ -1.86
CLINT1-208ENST00000524306 C3orf84H3BNL1 204 aa3.41□□□□□ -1.86
CLINT1-208ENST00000524306 PSCAO43653 123 aa3.41□□□□□ -1.86
CLINT1-208ENST00000524306 IGFL1Q6UW32 110 aa3.41□□□□□ -1.86
CLINT1-208ENST00000524306 LINC00336Q6ZUF6 198 aa3.41□□□□□ -1.86
CLINT1-208ENST00000524306 KRTAP13-1Q8IUC0 172 aa3.41□□□□□ -1.86
CLINT1-208ENST00000524306 UBE2DNLQ8IWF7 75 aa3.41□□□□□ -1.86
CLINT1-208ENST00000524306 SCXQ7RTU7 201 aa3.4□□□□□ -1.86
CLINT1-208ENST00000524306 PRKDCP78527 4128 aaKnown RBP3.4□□□□□ -1.87
CLINT1-208ENST00000524306 PRB2P02812 416 aaPredicted RBP3.4□□□□□ -1.87
CLINT1-208ENST00000524306 FP248Q71RG6 208 aaPredicted RBP3.4□□□□□ -1.87
CLINT1-208ENST00000524306 FLNBO75369 2602 aaKnown RBP3.39□□□□□ -1.87
CLINT1-208ENST00000524306 ZCCHC13Q8WW36 166 aaKnown RBP3.39□□□□□ -1.87
CLINT1-208ENST00000524306 SNURFQ9Y675 71 aa3.39□□□□□ -1.87
CLINT1-208ENST00000524306 LINC00483Q53H64 154 aa3.39□□□□□ -1.87
CLINT1-208ENST00000524306 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.38□□□□□ -1.87
CLINT1-208ENST00000524306 H3BPC8 53 aa3.38□□□□□ -1.87
CLINT1-208ENST00000524306 KRTAP4-2Q9BYR5 136 aa3.38□□□□□ -1.87
CLINT1-208ENST00000524306 HCG22E2RYF7 251 aa3.38□□□□□ -1.87
CLINT1-208ENST00000524306 UBE2AP49459 152 aa3.38□□□□□ -1.87
CLINT1-208ENST00000524306 SPACA4Q8TDM5 124 aa3.38□□□□□ -1.87
CLINT1-208ENST00000524306 VPS13DQ5THJ4 4388 aa3.37□□□□□ -1.87
CLINT1-208ENST00000524306 Q8N9L7 120 aa3.37□□□□□ -1.87
CLINT1-208ENST00000524306 STAB1Q9NY15 2570 aa3.37□□□□□ -1.87
CLINT1-208ENST00000524306 ALMS1Q8TCU4 4167 aa3.37□□□□□ -1.87
CLINT1-208ENST00000524306 KRTAP29-1A8MX34 341 aaPredicted RBP3.37□□□□□ -1.87
CLINT1-208ENST00000524306 TENM3Q9P273 2699 aa3.37□□□□□ -1.87
CLINT1-208ENST00000524306 PRLHP81277 87 aa3.37□□□□□ -1.87
CLINT1-208ENST00000524306 PHF5AQ7RTV0 110 aaKnown RBP3.37□□□□□ -1.87
CLINT1-208ENST00000524306 LINC00472Q9H8W2 130 aa3.37□□□□□ -1.87
CLINT1-208ENST00000524306 IGKV2-24A0A0C4DH68 120 aa3.36□□□□□ -1.87
CLINT1-208ENST00000524306 K7EQZ3 153 aa3.36□□□□□ -1.87
CLINT1-208ENST00000524306 ZNF706Q9Y5V0 76 aaPredicted RBP3.36□□□□□ -1.87
CLINT1-208ENST00000524306 A8MWP4 228 aa3.36□□□□□ -1.87
CLINT1-208ENST00000524306 Q6ZR54 194 aa3.36□□□□□ -1.87
CLINT1-208ENST00000524306 KRTAP11-1Q8IUC1 163 aa3.36□□□□□ -1.87
CLINT1-208ENST00000524306 NDUFB1O75438 58 aa3.35□□□□□ -1.87
CLINT1-208ENST00000524306 PRR15Q8IV56 129 aa3.35□□□□□ -1.87
CLINT1-208ENST00000524306 HIGD2AQ9BW72 106 aa3.35□□□□□ -1.87
CLINT1-208ENST00000524306 CYP4F30PQ9H0H9 118 aa3.35□□□□□ -1.87
CLINT1-208ENST00000524306 PLAC8Q9NZF1 115 aa3.35□□□□□ -1.87
CLINT1-208ENST00000524306 A0A087WSZ3 146 aa3.34□□□□□ -1.87
CLINT1-208ENST00000524306 A0A087WTM6 91 aa3.34□□□□□ -1.87
CLINT1-208ENST00000524306 ASB16-AS1Q495Z4 193 aa3.34□□□□□ -1.87
CLINT1-208ENST00000524306 BRK1Q8WUW1 75 aa3.34□□□□□ -1.87
CLINT1-208ENST00000524306 CHTF8P0CG12 524 aa3.34□□□□□ -1.87
CLINT1-208ENST00000524306 NBEAL1Q6ZS30 2694 aa3.34□□□□□ -1.87
CLINT1-208ENST00000524306 COL7A1Q02388 2944 aa3.34□□□□□ -1.88
CLINT1-208ENST00000524306 COL6A5A8TX70 2615 aa3.33□□□□□ -1.88
CLINT1-208ENST00000524306 Q1T7F1 81 aa3.33□□□□□ -1.88
CLINT1-208ENST00000524306 CD164Q04900 197 aa3.33□□□□□ -1.88
CLINT1-208ENST00000524306 SPANXA2-OT1Q8N9U9 137 aa3.33□□□□□ -1.88
CLINT1-208ENST00000524306 FAM30AQ9NZY2 134 aa3.33□□□□□ -1.88
CLINT1-208ENST00000524306 hDV103S1A0JD37 113 aa3.32□□□□□ -1.88
CLINT1-208ENST00000524306 IGLV5-52A0A0A0MRZ9 124 aa3.32□□□□□ -1.88
CLINT1-208ENST00000524306 PMAIP1Q13794 54 aa3.32□□□□□ -1.88
CLINT1-208ENST00000524306 MP68P56378 58 aa3.31□□□□□ -1.88
CLINT1-208ENST00000524306 KRTAP19-1Q8IUB9 90 aa3.31□□□□□ -1.88
CLINT1-208ENST00000524306 WWC2-AS2Q96NR7 200 aa3.31□□□□□ -1.88
CLINT1-208ENST00000524306 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.31□□□□□ -1.88
CLINT1-208ENST00000524306 PANO1I0J062 215 aa3.31□□□□□ -1.88
CLINT1-208ENST00000524306 MOBPQ13875 183 aa3.31□□□□□ -1.88
CLINT1-208ENST00000524306 KRTAP5-3Q6L8H2 238 aa3.31□□□□□ -1.88
CLINT1-208ENST00000524306 CASC2Q6XLA1 102 aa3.31□□□□□ -1.88
CLINT1-208ENST00000524306 TP53AIP1Q9HCN2 124 aa3.31□□□□□ -1.88
CLINT1-208ENST00000524306 H3BS24 57 aa3.3□□□□□ -1.88
CLINT1-208ENST00000524306 RTL8CO15255 209 aa3.3□□□□□ -1.88
CLINT1-208ENST00000524306 ZNF861PO60384 105 aa3.3□□□□□ -1.88
CLINT1-208ENST00000524306 FAM229BQ4G0N7 80 aa3.3□□□□□ -1.88
CLINT1-208ENST00000524306 Q96NJ1 140 aa3.3□□□□□ -1.88
CLINT1-208ENST00000524306 TRAV22A0A0B4J277 110 aa3.3□□□□□ -1.88
CLINT1-208ENST00000524306 MPLKIPQ8TAP9 179 aa3.3□□□□□ -1.88
CLINT1-208ENST00000524306 MMP24-AS1A0A0U1RRL7 71 aa3.3□□□□□ -1.88
CLINT1-208ENST00000524306 DNAH10Q8IVF4 4471 aa3.29□□□□□ -1.88
CLINT1-208ENST00000524306 CSMD3Q7Z407 3707 aa3.29□□□□□ -1.88
CLINT1-208ENST00000524306 MEGF8Q7Z7M0 2845 aa3.29□□□□□ -1.88
CLINT1-208ENST00000524306 A0A0G2JQZ4 141 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms