RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-223	ENST00000524033	HAMP	P81172	84 aa		5.08	□□□□□ -1.6
SPIDR-223	ENST00000524033		Q6ZRU5	148 aa		5.08	□□□□□ -1.6
SPIDR-223	ENST00000524033	KRTAP17-1	Q9BYP8	105 aa		5.08	□□□□□ -1.6
SPIDR-223	ENST00000524033	XAGE1A	Q9HD64	81 aa		5.08	□□□□□ -1.6
SPIDR-223	ENST00000524033	ATP5E	P56381	51 aa	Predicted RBP	5.07	□□□□□ -1.6
SPIDR-223	ENST00000524033	C4orf26	Q17RF5	130 aa		5.07	□□□□□ -1.6
SPIDR-223	ENST00000524033	UBE2DNL	Q8IWF7	75 aa		5.07	□□□□□ -1.6
SPIDR-223	ENST00000524033	RMI2	Q96E14	147 aa		5.07	□□□□□ -1.6
SPIDR-223	ENST00000524033	RTL8C	O15255	209 aa		5.06	□□□□□ -1.6
SPIDR-223	ENST00000524033	NDUFC1	O43677	76 aa		5.06	□□□□□ -1.6
SPIDR-223	ENST00000524033	WFDC10B	Q8IUB3	73 aa		5.06	□□□□□ -1.6
SPIDR-223	ENST00000524033	CAMK2N2	Q96S95	79 aa		5.06	□□□□□ -1.6
SPIDR-223	ENST00000524033		F8WEM9	126 aa		5.05	□□□□□ -1.6
SPIDR-223	ENST00000524033	PRY	O14603	147 aa		5.05	□□□□□ -1.6
SPIDR-223	ENST00000524033	NREP	Q16612	68 aa		5.05	□□□□□ -1.6
SPIDR-223	ENST00000524033	HIGD2B	Q4VC39	106 aa		5.05	□□□□□ -1.6
SPIDR-223	ENST00000524033	SCX	Q7RTU7	201 aa		5.05	□□□□□ -1.6
SPIDR-223	ENST00000524033	ABCA13	Q86UQ4	5058 aa		5.04	□□□□□ -1.6
SPIDR-223	ENST00000524033	IGLV5-48	A0A075B6I7	105 aa		5.04	□□□□□ -1.6
SPIDR-223	ENST00000524033	IGLV5-37	A0A075B6J1	123 aa		5.04	□□□□□ -1.6
SPIDR-223	ENST00000524033		A0A0U1RQV1	116 aa		5.04	□□□□□ -1.6
SPIDR-223	ENST00000524033		A0A1B0GVY2	172 aa		5.04	□□□□□ -1.6
SPIDR-223	ENST00000524033	HRCT1	Q6UXD1	115 aa		5.04	□□□□□ -1.6
SPIDR-223	ENST00000524033		Q6ZR54	194 aa		5.04	□□□□□ -1.6
SPIDR-223	ENST00000524033	OCR1	Q9BZK8	76 aa		5.04	□□□□□ -1.6
SPIDR-223	ENST00000524033	KCNQ1DN	Q9H478	68 aa		5.04	□□□□□ -1.6
SPIDR-223	ENST00000524033	TLX1NB	P0CAT3	122 aa		5.03	□□□□□ -1.6
SPIDR-223	ENST00000524033	LINC01556	Q5JQF7	62 aa		5.03	□□□□□ -1.6
SPIDR-223	ENST00000524033	C1orf134	Q5TEV5	83 aa		5.03	□□□□□ -1.6
SPIDR-223	ENST00000524033		Q6ZRP5	223 aa		5.03	□□□□□ -1.6
SPIDR-223	ENST00000524033	SNURF	Q9Y675	71 aa		5.03	□□□□□ -1.6
SPIDR-223	ENST00000524033	DNAH11	Q96DT5	4516 aa		5.02	□□□□□ -1.61
SPIDR-223	ENST00000524033	SMIM26	A0A096LP01	95 aa		5.02	□□□□□ -1.61
SPIDR-223	ENST00000524033	KRTAP4-8	A0A0G2JLE6	195 aa		5.02	□□□□□ -1.61
SPIDR-223	ENST00000524033		A0A1B0GW54	56 aa		5.02	□□□□□ -1.61
SPIDR-223	ENST00000524033	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	5.02	□□□□□ -1.61
SPIDR-223	ENST00000524033	BPY2	O14599	106 aa		5.02	□□□□□ -1.61
SPIDR-223	ENST00000524033	SPRR1A	P35321	89 aa		5.02	□□□□□ -1.61
SPIDR-223	ENST00000524033	FP248	Q71RG6	208 aa	Predicted RBP	5.02	□□□□□ -1.61
SPIDR-223	ENST00000524033		Q8N377	158 aa		5.02	□□□□□ -1.61
SPIDR-223	ENST00000524033	DYNC1H1	Q14204	4646 aa	Known RBP	5.02	□□□□□ -1.61
SPIDR-223	ENST00000524033	TMEM254	Q8TBM7	123 aa		5.01	□□□□□ -1.61
SPIDR-223	ENST00000524033	C7orf33	Q8WU49	177 aa		5.01	□□□□□ -1.61
SPIDR-223	ENST00000524033	SYCN	Q0VAF6	134 aa		5	□□□□□ -1.61
SPIDR-223	ENST00000524033	SERTAD4-AS1	Q5TG53	156 aa		5	□□□□□ -1.61
SPIDR-223	ENST00000524033	NBDY	A0A0U1RRE5	68 aa		4.99	□□□□□ -1.61
SPIDR-223	ENST00000524033		A0A1W2PNM2	257 aa		4.99	□□□□□ -1.61
SPIDR-223	ENST00000524033	ESRG	Q1W209	222 aa		4.99	□□□□□ -1.61
SPIDR-223	ENST00000524033	LCE1D	Q5T752	114 aa		4.99	□□□□□ -1.61
SPIDR-223	ENST00000524033	LINC00588	Q9Y4M8	146 aa		4.99	□□□□□ -1.61
SPIDR-223	ENST00000524033	DNAH10OS	P0CZ25	163 aa		4.98	□□□□□ -1.61
SPIDR-223	ENST00000524033		Q6ZRX8	168 aa		4.98	□□□□□ -1.61
SPIDR-223	ENST00000524033		Q8N9L7	120 aa		4.98	□□□□□ -1.61
SPIDR-223	ENST00000524033		Q9BRP9	147 aa		4.98	□□□□□ -1.61
SPIDR-223	ENST00000524033	KRTAP9-3	Q9BYQ3	159 aa		4.98	□□□□□ -1.61
SPIDR-223	ENST00000524033	DHRS4-AS1	Q9P1J3	65 aa		4.98	□□□□□ -1.61
SPIDR-223	ENST00000524033	DNAH5	Q8TE73	4624 aa		4.98	□□□□□ -1.61
SPIDR-223	ENST00000524033	IGLV1-50	A0A075B6I6	118 aa		4.97	□□□□□ -1.61
SPIDR-223	ENST00000524033	KRTAP7-1	Q8IUC3	87 aa		4.97	□□□□□ -1.61
SPIDR-223	ENST00000524033		Q8NBF4	154 aa		4.97	□□□□□ -1.61
SPIDR-223	ENST00000524033	ZCCHC13	Q8WW36	166 aa	Known RBP	4.97	□□□□□ -1.61
SPIDR-223	ENST00000524033	SPRR4	Q96PI1	79 aa		4.97	□□□□□ -1.61
SPIDR-223	ENST00000524033	HSPG2	P98160	4391 aa		4.97	□□□□□ -1.61
SPIDR-223	ENST00000524033	LRP1B	Q9NZR2	4599 aa		4.96	□□□□□ -1.62
SPIDR-223	ENST00000524033	C16orf90	A8MZG2	172 aa		4.96	□□□□□ -1.62
SPIDR-223	ENST00000524033	KRTAP15-1	Q3LI76	137 aa		4.96	□□□□□ -1.62
SPIDR-223	ENST00000524033	NKAPP1	Q8N9T2	125 aa		4.96	□□□□□ -1.62
SPIDR-223	ENST00000524033	IGKV2D-24	A0A075B6R9	120 aa		4.95	□□□□□ -1.62
SPIDR-223	ENST00000524033	APOB	P04114	4563 aa	Known RBP	4.94	□□□□□ -1.62
SPIDR-223	ENST00000524033	FUS	P35637	526 aa	Known RBP eCLIP	4.94	□□□□□ -1.62
SPIDR-223	ENST00000524033	DSCR10	P59022	87 aa		4.94	□□□□□ -1.62
SPIDR-223	ENST00000524033	FAM229B	Q4G0N7	80 aa		4.94	□□□□□ -1.62
SPIDR-223	ENST00000524033	SMIM29	Q86T20	159 aa		4.94	□□□□□ -1.62
SPIDR-223	ENST00000524033	LINC00474	Q9P2X8	69 aa		4.94	□□□□□ -1.62
SPIDR-223	ENST00000524033	PRO0628	Q9UI54	55 aa		4.94	□□□□□ -1.62
SPIDR-223	ENST00000524033	CDK2AP2	O75956	126 aa		4.93	□□□□□ -1.62
SPIDR-223	ENST00000524033	C1orf137	Q5JT78	98 aa		4.93	□□□□□ -1.62
SPIDR-223	ENST00000524033	KRTAP1-5	Q9BYS1	174 aa		4.93	□□□□□ -1.62
SPIDR-223	ENST00000524033	ST20-AS1	Q8NBB2	130 aa		4.92	□□□□□ -1.62
SPIDR-223	ENST00000524033	HIGD2A	Q9BW72	106 aa		4.92	□□□□□ -1.62
SPIDR-223	ENST00000524033	KRTAP4-5	Q9BYR2	181 aa		4.92	□□□□□ -1.62
SPIDR-223	ENST00000524033	IGLV8-61	A0A075B6I0	122 aa		4.91	□□□□□ -1.62
SPIDR-223	ENST00000524033	ETDC	A0A1B0GVM5	59 aa		4.91	□□□□□ -1.62
SPIDR-223	ENST00000524033	FAM168B	A1KXE4	195 aa		4.91	□□□□□ -1.62
SPIDR-223	ENST00000524033	DEFB105A	Q8NG35	78 aa		4.91	□□□□□ -1.62
SPIDR-223	ENST00000524033	HERC1	Q15751	4861 aa		4.91	□□□□□ -1.62
SPIDR-223	ENST00000524033	hDV103S1	A0JD37	113 aa		4.9	□□□□□ -1.63
SPIDR-223	ENST00000524033	SRRM2	Q9UQ35	2752 aa	Known RBP	4.89	□□□□□ -1.63
SPIDR-223	ENST00000524033	RPL37AP8	A6NKH3	93 aa		4.89	□□□□□ -1.63
SPIDR-223	ENST00000524033		K7EQZ3	153 aa		4.89	□□□□□ -1.63
SPIDR-223	ENST00000524033	LCE5A	Q5TCM9	118 aa		4.89	□□□□□ -1.63
SPIDR-223	ENST00000524033	MRPL55	Q7Z7F7	128 aa	Known RBP	4.89	□□□□□ -1.63
SPIDR-223	ENST00000524033	CYP4F30P	Q9H0H9	118 aa		4.89	□□□□□ -1.63
SPIDR-223	ENST00000524033	HCG22	E2RYF7	251 aa		4.87	□□□□□ -1.63
SPIDR-223	ENST00000524033	REG3G	Q6UW15	175 aa		4.87	□□□□□ -1.63
SPIDR-223	ENST00000524033		Q6ZRN7	208 aa	Predicted RBP	4.87	□□□□□ -1.63
SPIDR-223	ENST00000524033	VPS13B	Q7Z7G8	4022 aa		4.87	□□□□□ -1.63
SPIDR-223	ENST00000524033	KRTAP29-1	A8MX34	341 aa	Predicted RBP	4.86	□□□□□ -1.63
SPIDR-223	ENST00000524033	IGFL1	Q6UW32	110 aa		4.86	□□□□□ -1.63
SPIDR-223	ENST00000524033	KRTAP4-7	Q9BYR0	210 aa		4.86	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms