RNA–Protein interactions for RNA: ENST00000523540.1

PCM1-219, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-219ENST00000523540 SRRM2Q9UQ35 2752 aaKnown RBP0.68□□□□□ -2.3
PCM1-219ENST00000523540 CELSR2Q9HCU4 2923 aa0.68□□□□□ -2.3
PCM1-219ENST00000523540 GVINP1Q7Z2Y8 2422 aa0.68□□□□□ -2.3
PCM1-219ENST00000523540 TPRP12270 2363 aaKnown RBP0.68□□□□□ -2.3
PCM1-219ENST00000523540 VWFP04275 2813 aa0.68□□□□□ -2.3
PCM1-219ENST00000523540 NDUFA1O15239 70 aa0.68□□□□□ -2.3
PCM1-219ENST00000523540 SPINK9Q5DT21 86 aa0.68□□□□□ -2.3
PCM1-219ENST00000523540 C10orf95Q9H7T3 257 aa0.68□□□□□ -2.3
PCM1-219ENST00000523540 C6orf48Q9UBA6 75 aa0.68□□□□□ -2.3
PCM1-219ENST00000523540 PDE4DIPQ5VU43 2346 aa0.67□□□□□ -2.3
PCM1-219ENST00000523540 KNL1Q8NG31 2342 aa0.67□□□□□ -2.3
PCM1-219ENST00000523540 PIEZO1Q92508 2521 aa0.67□□□□□ -2.3
PCM1-219ENST00000523540 C2CD3Q4AC94 2353 aa0.67□□□□□ -2.3
PCM1-219ENST00000523540 IAPPP10997 89 aa0.67□□□□□ -2.3
PCM1-219ENST00000523540 LELP1Q5T871 98 aa0.67□□□□□ -2.3
PCM1-219ENST00000523540 KRTAP19-3Q7Z4W3 81 aa0.67□□□□□ -2.3
PCM1-219ENST00000523540 ABCA12Q86UK0 2595 aa0.67□□□□□ -2.3
PCM1-219ENST00000523540 SPRR1AP35321 89 aa0.66□□□□□ -2.3
PCM1-219ENST00000523540 H1FX-AS1Q4G0G2 97 aa0.66□□□□□ -2.3
PCM1-219ENST00000523540 Q5VSD8 79 aa0.66□□□□□ -2.3
PCM1-219ENST00000523540 DEFB105AQ8NG35 78 aa0.66□□□□□ -2.3
PCM1-219ENST00000523540 APLNQ9ULZ1 77 aa0.66□□□□□ -2.3
PCM1-219ENST00000523540 USF3Q68DE3 2245 aa0.65□□□□□ -2.3
PCM1-219ENST00000523540 CHD6Q8TD26 2715 aa0.65□□□□□ -2.31
PCM1-219ENST00000523540 RPS27P42677 84 aaKnown RBP0.65□□□□□ -2.31
PCM1-219ENST00000523540 RPS27LQ71UM5 84 aaKnown RBP0.65□□□□□ -2.31
PCM1-219ENST00000523540 WFDC13Q8IUB5 93 aa0.65□□□□□ -2.31
PCM1-219ENST00000523540 SPTBN2O15020 2390 aa0.65□□□□□ -2.31
PCM1-219ENST00000523540 CEP290O15078 2479 aa0.65□□□□□ -2.31
PCM1-219ENST00000523540 BDP1A6H8Y1 2624 aa0.65□□□□□ -2.31
PCM1-219ENST00000523540 HECTD1Q9ULT8 2610 aa0.65□□□□□ -2.31
PCM1-219ENST00000523540 PDZD2O15018 2839 aa0.65□□□□□ -2.31
PCM1-219ENST00000523540 OTOGQ6ZRI0 2925 aa0.65□□□□□ -2.31
PCM1-219ENST00000523540 CACNA1HO95180 2353 aa0.64□□□□□ -2.31
PCM1-219ENST00000523540 F8P00451 2351 aa0.64□□□□□ -2.31
PCM1-219ENST00000523540 SPTBN1Q01082 2364 aaKnown RBP0.64□□□□□ -2.31
PCM1-219ENST00000523540 APCP25054 2843 aa0.64□□□□□ -2.31
PCM1-219ENST00000523540 DEFB130BP0DP73 79 aa0.64□□□□□ -2.31
PCM1-219ENST00000523540 DEFB130AP0DP74 79 aa0.64□□□□□ -2.31
PCM1-219ENST00000523540 SPRR1BP22528 89 aa0.64□□□□□ -2.31
PCM1-219ENST00000523540 WFDC10BQ8IUB3 73 aa0.64□□□□□ -2.31
PCM1-219ENST00000523540 PKDREJQ9NTG1 2253 aa0.64□□□□□ -2.31
PCM1-219ENST00000523540 UBR5O95071 2799 aaPredicted RBP0.64□□□□□ -2.31
PCM1-219ENST00000523540 FLNCQ14315 2725 aa0.64□□□□□ -2.31
PCM1-219ENST00000523540 ABCA2Q9BZC7 2435 aa0.64□□□□□ -2.31
PCM1-219ENST00000523540 CHD7Q9P2D1 2997 aa0.63□□□□□ -2.31
PCM1-219ENST00000523540 TTC28Q96AY4 2481 aa0.63□□□□□ -2.31
PCM1-219ENST00000523540 WNK2Q9Y3S1 2297 aa0.63□□□□□ -2.31
PCM1-219ENST00000523540 A0A0D9SG42 100 aa0.63□□□□□ -2.31
PCM1-219ENST00000523540 KAAG1Q9UBP8 84 aa0.63□□□□□ -2.31
PCM1-219ENST00000523540 KLK9Q2XQG4 91 aa0.62□□□□□ -2.31
PCM1-219ENST00000523540 CSPG4Q6UVK1 2322 aa0.61□□□□□ -2.31
PCM1-219ENST00000523540 MUC5BQ9HC84 5762 aaPredicted RBP0.61□□□□□ -2.31
PCM1-219ENST00000523540 IGLV5-48A0A075B6I7 105 aa0.61□□□□□ -2.31
PCM1-219ENST00000523540 H3BUA1 57 aa0.61□□□□□ -2.31
PCM1-219ENST00000523540 WT1-ASQ06250 92 aa0.61□□□□□ -2.31
PCM1-219ENST00000523540 ARHGAP5-AS1Q96IT6 56 aa0.61□□□□□ -2.31
PCM1-219ENST00000523540 PCNX1Q96RV3 2341 aa0.61□□□□□ -2.31
PCM1-219ENST00000523540 CRYBG3Q68DQ2 2970 aa0.61□□□□□ -2.31
PCM1-219ENST00000523540 SPTA1P02549 2419 aa0.6□□□□□ -2.31
PCM1-219ENST00000523540 ANK2Q01484 3957 aa0.6□□□□□ -2.31
PCM1-219ENST00000523540 ITPR3Q14573 2671 aa0.6□□□□□ -2.31
PCM1-219ENST00000523540 DEFB131AP59861 70 aa0.6□□□□□ -2.31
PCM1-219ENST00000523540 CREBBPQ92793 2442 aa0.6□□□□□ -2.31
PCM1-219ENST00000523540 USP9YO00507 2555 aaPredicted RBP0.6□□□□□ -2.31
PCM1-219ENST00000523540 USP24Q9UPU5 2620 aa0.6□□□□□ -2.31
PCM1-219ENST00000523540 TENM4Q6N022 2769 aa0.6□□□□□ -2.31
PCM1-219ENST00000523540 GCN1Q92616 2671 aaKnown RBP0.6□□□□□ -2.31
PCM1-219ENST00000523540 NF1P21359 2839 aa0.6□□□□□ -2.31
PCM1-219ENST00000523540 SETXQ7Z333 2677 aaKnown RBP0.59□□□□□ -2.31
PCM1-219ENST00000523540 MMP24-AS1A0A0U1RRL7 71 aa0.59□□□□□ -2.31
PCM1-219ENST00000523540 POLR2KP53803 58 aaKnown RBP0.59□□□□□ -2.31
PCM1-219ENST00000523540 RPL39P62891 51 aaKnown RBP0.59□□□□□ -2.31
PCM1-219ENST00000523540 TNRC18O15417 2968 aaPredicted RBP0.59□□□□□ -2.32
PCM1-219ENST00000523540 SETD2Q9BYW2 2564 aaPredicted RBP0.58□□□□□ -2.32
PCM1-219ENST00000523540 PRLHP81277 87 aa0.58□□□□□ -2.32
PCM1-219ENST00000523540 DEFB106AQ8N104 65 aa0.58□□□□□ -2.32
PCM1-219ENST00000523540 S4R3F8 94 aa0.58□□□□□ -2.32
PCM1-219ENST00000523540 TENM2Q9NT68 2774 aa0.58□□□□□ -2.32
PCM1-219ENST00000523540 PKD1L1Q8TDX9 2849 aa0.57□□□□□ -2.32
PCM1-219ENST00000523540 UNC79Q9P2D8 2635 aa0.57□□□□□ -2.32
PCM1-219ENST00000523540 CSMD3Q7Z407 3707 aa0.57□□□□□ -2.32
PCM1-219ENST00000523540 HIVEP1P15822 2718 aa0.57□□□□□ -2.32
PCM1-219ENST00000523540 ZZEF1O43149 2961 aa0.57□□□□□ -2.32
PCM1-219ENST00000523540 RPL39LQ96EH5 51 aaKnown RBP0.57□□□□□ -2.32
PCM1-219ENST00000523540 TTTY10Q9BZA0 68 aa0.57□□□□□ -2.32
PCM1-219ENST00000523540 PKD1L2Q7Z442 2459 aa0.57□□□□□ -2.32
PCM1-219ENST00000523540 ANKRD11Q6UB99 2663 aaPredicted RBP0.56□□□□□ -2.32
PCM1-219ENST00000523540 TACC2O95359 2948 aa0.56□□□□□ -2.32
PCM1-219ENST00000523540 ITPR1Q14643 2758 aa0.56□□□□□ -2.32
PCM1-219ENST00000523540 DEFB109BQ30KR1 87 aa0.56□□□□□ -2.32
PCM1-219ENST00000523540 MAP1BP46821 2468 aaKnown RBP0.56□□□□□ -2.32
PCM1-219ENST00000523540 AKAP6Q13023 2319 aa0.55□□□□□ -2.32
PCM1-219ENST00000523540 KALRNO60229 2985 aa0.55□□□□□ -2.32
PCM1-219ENST00000523540 UTP20O75691 2785 aaKnown RBP0.55□□□□□ -2.32
PCM1-219ENST00000523540 ZFYVE26Q68DK2 2539 aa0.55□□□□□ -2.32
PCM1-219ENST00000523540 NOP10Q9NPE3 64 aaKnown RBP0.55□□□□□ -2.32
PCM1-219ENST00000523540 NSD1Q96L73 2696 aaPredicted RBP0.55□□□□□ -2.32
PCM1-219ENST00000523540 MGAQ8IWI9 3026 aa0.55□□□□□ -2.32
PCM1-219ENST00000523540 LYSTQ99698 3801 aa0.55□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 155.3 ms