RNA–Protein interactions for RNA: ENST00000522998.1

PCM1-217, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-217ENST00000522998 MYH4Q9Y623 1939 aa-0.94□□□□□ -2.56
PCM1-217ENST00000522998 RAPGEF2Q9Y4G8 1499 aa-0.94□□□□□ -2.56
PCM1-217ENST00000522998 DOT1LQ8TEK3 1739 aa-0.95□□□□□ -2.56
PCM1-217ENST00000522998 SPTAN1Q13813 2472 aaKnown RBP-0.95□□□□□ -2.56
PCM1-217ENST00000522998 D6R8Y8 96 aa-0.95□□□□□ -2.56
PCM1-217ENST00000522998 GNGT2O14610 69 aa-0.95□□□□□ -2.56
PCM1-217ENST00000522998 LEPROTL1O95214 131 aa-0.95□□□□□ -2.56
PCM1-217ENST00000522998 SMR3BP02814 79 aaPredicted RBP-0.95□□□□□ -2.56
PCM1-217ENST00000522998 MUSTN1Q8IVN3 82 aa-0.95□□□□□ -2.56
PCM1-217ENST00000522998 TRGV9Q99603 122 aa-0.95□□□□□ -2.56
PCM1-217ENST00000522998 PRO3102Q9H379 93 aa-0.95□□□□□ -2.56
PCM1-217ENST00000522998 WIZO95785 1651 aa-0.95□□□□□ -2.56
PCM1-217ENST00000522998 ZFYVE16Q7Z3T8 1539 aa-0.95□□□□□ -2.56
PCM1-217ENST00000522998 ABCC2Q92887 1545 aa-0.95□□□□□ -2.56
PCM1-217ENST00000522998 NWD1Q149M9 1564 aa-0.96□□□□□ -2.56
PCM1-217ENST00000522998 CLTCQ00610 1675 aaKnown RBP-0.96□□□□□ -2.56
PCM1-217ENST00000522998 ZNF831Q5JPB2 1677 aa-0.96□□□□□ -2.56
PCM1-217ENST00000522998 F8WEM9 126 aa-0.96□□□□□ -2.56
PCM1-217ENST00000522998 DEFB130BP0DP73 79 aa-0.96□□□□□ -2.56
PCM1-217ENST00000522998 DEFB130AP0DP74 79 aa-0.96□□□□□ -2.56
PCM1-217ENST00000522998 RPL38P63173 70 aaKnown RBP-0.96□□□□□ -2.56
PCM1-217ENST00000522998 ETDBQ3ZM63 59 aa-0.96□□□□□ -2.56
PCM1-217ENST00000522998 LTN1O94822 1766 aa-0.96□□□□□ -2.56
PCM1-217ENST00000522998 DNAH17Q9UFH2 4485 aa-0.97□□□□□ -2.56
PCM1-217ENST00000522998 SMG1Q96Q15 3661 aaKnown RBP-0.97□□□□□ -2.56
PCM1-217ENST00000522998 UBR1Q8IWV7 1749 aa-0.97□□□□□ -2.56
PCM1-217ENST00000522998 MAGI3Q5TCQ9 1506 aa-0.97□□□□□ -2.56
PCM1-217ENST00000522998 IQCF6A8MYZ5 107 aa-0.97□□□□□ -2.56
PCM1-217ENST00000522998 SERP2Q8N6R1 65 aa-0.97□□□□□ -2.56
PCM1-217ENST00000522998 GAFA1Q96PS6 74 aa-0.97□□□□□ -2.56
PCM1-217ENST00000522998 PMCHL2Q9BQD1 86 aa-0.97□□□□□ -2.56
PCM1-217ENST00000522998 DEPDC5O75140 1603 aa-0.97□□□□□ -2.57
PCM1-217ENST00000522998 ANKRD36BQ8N2N9 1353 aa-0.97□□□□□ -2.57
PCM1-217ENST00000522998 DMXL2Q8TDJ6 3036 aa-0.97□□□□□ -2.57
PCM1-217ENST00000522998 CDC42BPAQ5VT25 1732 aa-0.98□□□□□ -2.57
PCM1-217ENST00000522998 BAZ1AQ9NRL2 1556 aaPredicted RBP-0.98□□□□□ -2.57
PCM1-217ENST00000522998 C20orf202A1L168 122 aa-0.98□□□□□ -2.57
PCM1-217ENST00000522998 C3orf79P0CE67 100 aa-0.98□□□□□ -2.57
PCM1-217ENST00000522998 MT1HL1P0DM35 61 aa-0.98□□□□□ -2.57
PCM1-217ENST00000522998 IAPPP10997 89 aa-0.98□□□□□ -2.57
PCM1-217ENST00000522998 CLPSL2Q6UWE3 100 aa-0.98□□□□□ -2.57
PCM1-217ENST00000522998 PARP4Q9UKK3 1724 aaKnown RBP-0.98□□□□□ -2.57
PCM1-217ENST00000522998 TEX14Q8IWB6 1497 aa-0.99□□□□□ -2.57
PCM1-217ENST00000522998 DNAH10Q8IVF4 4471 aa-0.99□□□□□ -2.57
PCM1-217ENST00000522998 MT-ATP8P03928 68 aa-0.99□□□□□ -2.57
PCM1-217ENST00000522998 MT1GP13640 62 aa-0.99□□□□□ -2.57
PCM1-217ENST00000522998 HMGN3Q15651 99 aa-0.99□□□□□ -2.57
PCM1-217ENST00000522998 WFDC9Q8NEX5 89 aa-0.99□□□□□ -2.57
PCM1-217ENST00000522998 DDX60LQ5H9U9 1706 aaKnown RBP-0.99□□□□□ -2.57
PCM1-217ENST00000522998 ATMQ13315 3056 aa-0.99□□□□□ -2.57
PCM1-217ENST00000522998 DNAH5Q8TE73 4624 aa-1□□□□□ -2.57
PCM1-217ENST00000522998 TOGARAM1Q9Y4F4 1720 aa-1□□□□□ -2.57
PCM1-217ENST00000522998 TRAV21A0A0B4J279 112 aa-1□□□□□ -2.57
PCM1-217ENST00000522998 A0A1B0GUT8 65 aa-1□□□□□ -2.57
PCM1-217ENST00000522998 MT1EP04732 61 aa-1□□□□□ -2.57
PCM1-217ENST00000522998 SARNPP82979 210 aaKnown RBP-1□□□□□ -2.57
PCM1-217ENST00000522998 ALKAL2Q6UX46 152 aa-1□□□□□ -2.57
PCM1-217ENST00000522998 ZNF720Q7Z2F6 126 aa-1□□□□□ -2.57
PCM1-217ENST00000522998 ATP7BP35670 1465 aa-1□□□□□ -2.57
PCM1-217ENST00000522998 UQCRHLA0A096LP55 91 aa-1.01□□□□□ -2.57
PCM1-217ENST00000522998 LYNX1G3V0Z9 82 aa-1.01□□□□□ -2.57
PCM1-217ENST00000522998 ATOX1O00244 68 aa-1.01□□□□□ -2.57
PCM1-217ENST00000522998 COL5A1-AS1Q5SY13 56 aa-1.01□□□□□ -2.57
PCM1-217ENST00000522998 CEP170BQ9Y4F5 1589 aaPredicted RBP-1.01□□□□□ -2.57
PCM1-217ENST00000522998 MYO3AQ8NEV4 1616 aa-1.01□□□□□ -2.57
PCM1-217ENST00000522998 TMEM131LA2VDJ0 1609 aa-1.02□□□□□ -2.57
PCM1-217ENST00000522998 ACYP1P07311 99 aa-1.02□□□□□ -2.57
PCM1-217ENST00000522998 IFI6P09912 130 aa-1.02□□□□□ -2.57
PCM1-217ENST00000522998 FAUP35544 74 aaKnown RBP-1.02□□□□□ -2.57
PCM1-217ENST00000522998 PLCH1Q4KWH8 1693 aa-1.02□□□□□ -2.57
PCM1-217ENST00000522998 KRTAP8-1Q8IUC2 63 aa-1.02□□□□□ -2.57
PCM1-217ENST00000522998 MT1LQ93083 61 aa-1.02□□□□□ -2.57
PCM1-217ENST00000522998 TRRAPQ9Y4A5 3859 aa-1.02□□□□□ -2.57
PCM1-217ENST00000522998 TLN1Q9Y490 2541 aaKnown RBP-1.03□□□□□ -2.57
PCM1-217ENST00000522998 ARFGEF2Q9Y6D5 1785 aa-1.03□□□□□ -2.57
PCM1-217ENST00000522998 LY75O60449 1722 aa-1.03□□□□□ -2.57
PCM1-217ENST00000522998 ITSN2Q9NZM3 1697 aa-1.03□□□□□ -2.57
PCM1-217ENST00000522998 CDC42BPGQ6DT37 1551 aa-1.03□□□□□ -2.57
PCM1-217ENST00000522998 PLIN4Q96Q06 1357 aa-1.03□□□□□ -2.57
PCM1-217ENST00000522998 ITPR2Q14571 2701 aa-1.03□□□□□ -2.57
PCM1-217ENST00000522998 TNP1P09430 55 aa-1.03□□□□□ -2.57
PCM1-217ENST00000522998 PLGLAQ15195 96 aa-1.03□□□□□ -2.57
PCM1-217ENST00000522998 ITSN1Q15811 1721 aa-1.03□□□□□ -2.58
PCM1-217ENST00000522998 NEXMIFQ5QGS0 1516 aa-1.04□□□□□ -2.58
PCM1-217ENST00000522998 ABCC10Q5T3U5 1492 aa-1.04□□□□□ -2.58
PCM1-217ENST00000522998 FYCO1Q9BQS8 1478 aa-1.04□□□□□ -2.58
PCM1-217ENST00000522998 LCE6AA0A183 80 aa-1.04□□□□□ -2.58
PCM1-217ENST00000522998 HMGN2P05204 90 aaKnown RBP-1.04□□□□□ -2.58
PCM1-217ENST00000522998 S100A10P60903 97 aa-1.04□□□□□ -2.58
PCM1-217ENST00000522998 DIP2BQ9P265 1576 aa-1.04□□□□□ -2.58
PCM1-217ENST00000522998 FANCAO15360 1455 aa-1.05□□□□□ -2.58
PCM1-217ENST00000522998 NCOA2Q15596 1464 aa-1.05□□□□□ -2.58
PCM1-217ENST00000522998 MMP24-AS1A0A0U1RRL7 71 aa-1.05□□□□□ -2.58
PCM1-217ENST00000522998 CYB5AP00167 134 aa-1.05□□□□□ -2.58
PCM1-217ENST00000522998 KIF1AQ12756 1690 aa-1.05□□□□□ -2.58
PCM1-217ENST00000522998 ZC3H13Q5T200 1668 aaKnown RBP-1.05□□□□□ -2.58
PCM1-217ENST00000522998 EPRSP07814 1512 aaKnown RBP-1.05□□□□□ -2.58
PCM1-217ENST00000522998 ATP10BO94823 1461 aa-1.05□□□□□ -2.58
PCM1-217ENST00000522998 TJP1Q07157 1748 aa-1.06□□□□□ -2.58
PCM1-217ENST00000522998 RICTORQ6R327 1708 aa-1.06□□□□□ -2.58
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms