RNA–Protein interactions for RNA: ENST00000522855.5

SKP1-210, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 2 BASIC

Gene SKP1, Length 802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-210ENST00000522855 K7EIL1 84 aa2.34□□□□□ -2.03
SKP1-210ENST00000522855 NDUFA1O15239 70 aa2.34□□□□□ -2.03
SKP1-210ENST00000522855 DEFB4AO15263 64 aa2.34□□□□□ -2.03
SKP1-210ENST00000522855 CCKP06307 115 aa2.34□□□□□ -2.03
SKP1-210ENST00000522855 IGHV3-30-3P0DP02 117 aa2.34□□□□□ -2.03
SKP1-210ENST00000522855 KPRPQ5T749 579 aaPredicted RBP2.34□□□□□ -2.03
SKP1-210ENST00000522855 Q8NAQ8 132 aa2.34□□□□□ -2.03
SKP1-210ENST00000522855 CLEC2BQ92478 149 aa2.34□□□□□ -2.03
SKP1-210ENST00000522855 RPL39LQ96EH5 51 aaKnown RBP2.34□□□□□ -2.03
SKP1-210ENST00000522855 LCE3DQ9BYE3 92 aa2.34□□□□□ -2.03
SKP1-210ENST00000522855 PKIGQ9Y2B9 76 aa2.34□□□□□ -2.03
SKP1-210ENST00000522855 JMJD7-PLA2G4BH0Y9G9 81 aa2.33□□□□□ -2.04
SKP1-210ENST00000522855 NDUFS5O43920 106 aa2.33□□□□□ -2.04
SKP1-210ENST00000522855 IGHV3-53P01767 116 aa2.33□□□□□ -2.04
SKP1-210ENST00000522855 BAALC-AS2P0C853 105 aa2.33□□□□□ -2.04
SKP1-210ENST00000522855 DEFB130BP0DP73 79 aa2.33□□□□□ -2.04
SKP1-210ENST00000522855 DEFB130AP0DP74 79 aa2.33□□□□□ -2.04
SKP1-210ENST00000522855 MIFP14174 115 aa2.33□□□□□ -2.04
SKP1-210ENST00000522855 DAD1P61803 113 aa2.33□□□□□ -2.04
SKP1-210ENST00000522855 KRTAP21-3Q3LHN1 58 aa2.33□□□□□ -2.04
SKP1-210ENST00000522855 FBN3Q75N90 2809 aa2.33□□□□□ -2.04
SKP1-210ENST00000522855 TRGV4A0A0C4DH28 118 aa2.32□□□□□ -2.04
SKP1-210ENST00000522855 TRBV7-4A0A0J9YYF1 115 aa2.32□□□□□ -2.04
SKP1-210ENST00000522855 M0QY20 66 aa2.32□□□□□ -2.04
SKP1-210ENST00000522855 IGLV7-43P04211 117 aa2.32□□□□□ -2.04
SKP1-210ENST00000522855 HTN3P15516 51 aa2.32□□□□□ -2.04
SKP1-210ENST00000522855 CIRBPQ14011 172 aaKnown RBP2.32□□□□□ -2.04
SKP1-210ENST00000522855 Q1T7F1 81 aa2.32□□□□□ -2.04
SKP1-210ENST00000522855 C11orf68Q9H3H3 251 aaKnown RBP2.32□□□□□ -2.04
SKP1-210ENST00000522855 LINC00846Q9NV44 126 aa2.32□□□□□ -2.04
SKP1-210ENST00000522855 NDUFA12Q9UI09 145 aa2.32□□□□□ -2.04
SKP1-210ENST00000522855 CSMD3Q7Z407 3707 aa2.31□□□□□ -2.04
SKP1-210ENST00000522855 TRBV10-1A0A0K0K1A3 114 aa2.31□□□□□ -2.04
SKP1-210ENST00000522855 H3BQ85 93 aa2.31□□□□□ -2.04
SKP1-210ENST00000522855 H7C2G1 150 aa2.31□□□□□ -2.04
SKP1-210ENST00000522855 KRTAP5-8O75690 187 aa2.31□□□□□ -2.04
SKP1-210ENST00000522855 SPART-AS1P0CW21 52 aa2.31□□□□□ -2.04
SKP1-210ENST00000522855 ESRGQ1W209 222 aa2.31□□□□□ -2.04
SKP1-210ENST00000522855 C20orf197Q8N268 126 aa2.31□□□□□ -2.04
SKP1-210ENST00000522855 LINC00308Q8TCZ7 52 aa2.31□□□□□ -2.04
SKP1-210ENST00000522855 DEFB104AQ8WTQ1 72 aa2.31□□□□□ -2.04
SKP1-210ENST00000522855 BRK1Q8WUW1 75 aa2.31□□□□□ -2.04
SKP1-210ENST00000522855 TM2D3Q9BRN9 247 aa2.31□□□□□ -2.04
SKP1-210ENST00000522855 DNHD1Q96M86 4753 aa2.31□□□□□ -2.04
SKP1-210ENST00000522855 DNAH6Q9C0G6 4158 aa2.31□□□□□ -2.04
SKP1-210ENST00000522855 C16orf90A8MZG2 172 aa2.3□□□□□ -2.04
SKP1-210ENST00000522855 PDE6GP18545 87 aa2.3□□□□□ -2.04
SKP1-210ENST00000522855 SS18Q15532 418 aa2.3□□□□□ -2.04
SKP1-210ENST00000522855 B9D2Q9BPU9 175 aa2.3□□□□□ -2.04
SKP1-210ENST00000522855 PRO0255Q9UI72 69 aa2.3□□□□□ -2.04
SKP1-210ENST00000522855 DYNC2H1Q8NCM8 4307 aaKnown RBP2.29□□□□□ -2.04
SKP1-210ENST00000522855 A0A087WVE0 104 aa2.29□□□□□ -2.04
SKP1-210ENST00000522855 LOC110117498A0A087WWA1 95 aa2.29□□□□□ -2.04
SKP1-210ENST00000522855 IGKV3D-7A0A0C4DH55 119 aa2.29□□□□□ -2.04
SKP1-210ENST00000522855 TRBV6-4A0A1B0GX49 114 aa2.29□□□□□ -2.04
SKP1-210ENST00000522855 F8WEM9 126 aa2.29□□□□□ -2.04
SKP1-210ENST00000522855 KRTAP10-10P60014 251 aa2.29□□□□□ -2.04
SKP1-210ENST00000522855 RPL39P62891 51 aaKnown RBP2.29□□□□□ -2.04
SKP1-210ENST00000522855 KTN1-AS1Q86SY8 53 aa2.29□□□□□ -2.04
SKP1-210ENST00000522855 C1orf64Q8NEQ6 169 aa2.29□□□□□ -2.04
SKP1-210ENST00000522855 ZNF625Q96I27 306 aaPredicted RBP2.29□□□□□ -2.04
SKP1-210ENST00000522855 UBL5Q9BZL1 73 aa2.29□□□□□ -2.04
SKP1-210ENST00000522855 LYSTQ99698 3801 aa2.29□□□□□ -2.04
SKP1-210ENST00000522855 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.28□□□□□ -2.04
SKP1-210ENST00000522855 A0A096LPF7 62 aa2.28□□□□□ -2.04
SKP1-210ENST00000522855 LCE6AA0A183 80 aa2.28□□□□□ -2.04
SKP1-210ENST00000522855 IGKV2-29A2NJV5 120 aaPredicted RBP2.28□□□□□ -2.04
SKP1-210ENST00000522855 CRPP02741 224 aa2.28□□□□□ -2.04
SKP1-210ENST00000522855 RBM3P98179 157 aaKnown RBP2.28□□□□□ -2.04
SKP1-210ENST00000522855 SND1-IT1Q9HBX3 110 aa2.28□□□□□ -2.04
SKP1-210ENST00000522855 ORMDL1Q9P0S3 153 aa2.28□□□□□ -2.04
SKP1-210ENST00000522855 DEFB131BA0A096LNP1 70 aa2.27□□□□□ -2.05
SKP1-210ENST00000522855 TRBV6-8A0A0A6YYG3 113 aa2.27□□□□□ -2.05
SKP1-210ENST00000522855 TRAV10A0A0B4J240 114 aa2.27□□□□□ -2.05
SKP1-210ENST00000522855 hDV103S1A0JD37 113 aa2.27□□□□□ -2.05
SKP1-210ENST00000522855 TMEM256-PLSCR3K7ERE1 68 aa2.27□□□□□ -2.05
SKP1-210ENST00000522855 UBE2L6O14933 153 aa2.27□□□□□ -2.05
SKP1-210ENST00000522855 SOSTDC1Q6X4U4 206 aa2.27□□□□□ -2.05
SKP1-210ENST00000522855 PHF5AQ7RTV0 110 aaKnown RBP2.27□□□□□ -2.05
SKP1-210ENST00000522855 TMEM254Q8TBM7 123 aa2.27□□□□□ -2.05
SKP1-210ENST00000522855 CYP4F30PQ9H0H9 118 aa2.27□□□□□ -2.05
SKP1-210ENST00000522855 C14orf132Q9NPU4 83 aa2.27□□□□□ -2.05
SKP1-210ENST00000522855 ALMS1Q8TCU4 4167 aa2.27□□□□□ -2.05
SKP1-210ENST00000522855 TRAV23DV6A0A075B6W5 121 aa2.26□□□□□ -2.05
SKP1-210ENST00000522855 H3BNG1 76 aa2.26□□□□□ -2.05
SKP1-210ENST00000522855 UBE2BP63146 152 aa2.26□□□□□ -2.05
SKP1-210ENST00000522855 LINC00474Q9P2X8 69 aa2.26□□□□□ -2.05
SKP1-210ENST00000522855 VPS13DQ5THJ4 4388 aa2.26□□□□□ -2.05
SKP1-210ENST00000522855 DNAH1Q9P2D7 4330 aa2.26□□□□□ -2.05
SKP1-210ENST00000522855 STARD9Q9P2P6 4700 aa2.25□□□□□ -2.05
SKP1-210ENST00000522855 IGKV3OR2-268A0A0C4DH90 116 aa2.25□□□□□ -2.05
SKP1-210ENST00000522855 A0A1B0GW54 56 aa2.25□□□□□ -2.05
SKP1-210ENST00000522855 LELP1Q5T871 98 aa2.25□□□□□ -2.05
SKP1-210ENST00000522855 CLPSL2Q6UWE3 100 aa2.25□□□□□ -2.05
SKP1-210ENST00000522855 ENHOQ6UWT2 76 aa2.25□□□□□ -2.05
SKP1-210ENST00000522855 PP632Q6XCG6 107 aa2.25□□□□□ -2.05
SKP1-210ENST00000522855 Q6ZQT0 140 aa2.25□□□□□ -2.05
SKP1-210ENST00000522855 LINC00337Q8N6G1 96 aa2.25□□□□□ -2.05
SKP1-210ENST00000522855 LINC00304Q8N9R0 145 aa2.25□□□□□ -2.05
SKP1-210ENST00000522855 MUC7Q8TAX7 377 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms