RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 SPANXCQ9NY87 97 aa3.31□□□□□ -1.88
PABPC1-220ENST00000522658 HSPB8Q9UJY1 196 aa3.31□□□□□ -1.88
PABPC1-220ENST00000522658 TRBV20-1A0A075B6N2 111 aa3.3□□□□□ -1.88
PABPC1-220ENST00000522658 OBSCNQ5VST9 7968 aa3.29□□□□□ -1.88
PABPC1-220ENST00000522658 A0A0A0MQY5 61 aa3.29□□□□□ -1.88
PABPC1-220ENST00000522658 SNAPINO95295 136 aa3.29□□□□□ -1.88
PABPC1-220ENST00000522658 ELOF1P60002 83 aaKnown RBP3.29□□□□□ -1.88
PABPC1-220ENST00000522658 C6orf99Q4VX62 202 aa3.29□□□□□ -1.88
PABPC1-220ENST00000522658 C1orf195Q5TG92 126 aa3.29□□□□□ -1.88
PABPC1-220ENST00000522658 COPS9Q8WXC6 57 aa3.29□□□□□ -1.88
PABPC1-220ENST00000522658 NHP2Q9NX24 153 aaKnown RBP3.29□□□□□ -1.88
PABPC1-220ENST00000522658 A0A0J9YXY3 114 aa3.28□□□□□ -1.88
PABPC1-220ENST00000522658 A0A1B0GWB2 263 aa3.28□□□□□ -1.88
PABPC1-220ENST00000522658 APOC3P02656 99 aa3.28□□□□□ -1.88
PABPC1-220ENST00000522658 Q5XG85 94 aa3.28□□□□□ -1.88
PABPC1-220ENST00000522658 LINC00518Q8N0U6 118 aa3.28□□□□□ -1.88
PABPC1-220ENST00000522658 SVBPQ8N300 66 aa3.28□□□□□ -1.88
PABPC1-220ENST00000522658 PMCHL2Q9BQD1 86 aa3.28□□□□□ -1.88
PABPC1-220ENST00000522658 FAM236DA0A1B0GTK5 79 aa3.27□□□□□ -1.89
PABPC1-220ENST00000522658 C20orf202A1L168 122 aa3.27□□□□□ -1.89
PABPC1-220ENST00000522658 FAM236CP0DP71 79 aa3.27□□□□□ -1.89
PABPC1-220ENST00000522658 FABP4P15090 132 aa3.27□□□□□ -1.89
PABPC1-220ENST00000522658 SOSTDC1Q6X4U4 206 aa3.27□□□□□ -1.89
PABPC1-220ENST00000522658 LINC00308Q8TCZ7 52 aa3.27□□□□□ -1.89
PABPC1-220ENST00000522658 A6NDN8 102 aa3.26□□□□□ -1.89
PABPC1-220ENST00000522658 E9PLD3 99 aa3.26□□□□□ -1.89
PABPC1-220ENST00000522658 C10orf91Q5T1B1 145 aa3.26□□□□□ -1.89
PABPC1-220ENST00000522658 SCGB1D4Q6XE38 83 aa3.26□□□□□ -1.89
PABPC1-220ENST00000522658 SLC7A5P1Q8MH63 180 aa3.26□□□□□ -1.89
PABPC1-220ENST00000522658 TRBV7-6A0A0J9YX20 115 aa3.25□□□□□ -1.89
PABPC1-220ENST00000522658 A4D1N5 150 aa3.25□□□□□ -1.89
PABPC1-220ENST00000522658 ZNF815PA8K554 130 aa3.25□□□□□ -1.89
PABPC1-220ENST00000522658 TIMM17BO60830 172 aa3.25□□□□□ -1.89
PABPC1-220ENST00000522658 OBSCN-AS1Q96MR7 158 aa3.25□□□□□ -1.89
PABPC1-220ENST00000522658 LINC00846Q9NV44 126 aa3.25□□□□□ -1.89
PABPC1-220ENST00000522658 SERF1AO75920 110 aa3.24□□□□□ -1.89
PABPC1-220ENST00000522658 ADAMTSL4-AS1Q5T5F5 129 aa3.24□□□□□ -1.89
PABPC1-220ENST00000522658 Q75L30 129 aa3.24□□□□□ -1.89
PABPC1-220ENST00000522658 TRAV13-2A0A0B4J235 113 aa3.23□□□□□ -1.89
PABPC1-220ENST00000522658 VAMP3Q15836 100 aa3.23□□□□□ -1.89
PABPC1-220ENST00000522658 Q6JHZ5 121 aa3.23□□□□□ -1.89
PABPC1-220ENST00000522658 CLEC2BQ92478 149 aa3.23□□□□□ -1.89
PABPC1-220ENST00000522658 IGLV5-48A0A075B6I7 105 aa3.22□□□□□ -1.89
PABPC1-220ENST00000522658 A0A0G2JQZ4 141 aa3.22□□□□□ -1.89
PABPC1-220ENST00000522658 LST1O00453 97 aa3.22□□□□□ -1.89
PABPC1-220ENST00000522658 Q96NJ1 140 aa3.22□□□□□ -1.89
PABPC1-220ENST00000522658 SS18L2Q9UHA2 77 aa3.22□□□□□ -1.89
PABPC1-220ENST00000522658 FLGP20930 4061 aaPredicted RBP3.21□□□□□ -1.9
PABPC1-220ENST00000522658 TRGC2P03986 189 aa3.21□□□□□ -1.9
PABPC1-220ENST00000522658 PCP4P48539 62 aa3.21□□□□□ -1.9
PABPC1-220ENST00000522658 KRTAP4-3Q9BYR4 195 aa3.21□□□□□ -1.9
PABPC1-220ENST00000522658 TRBV7-7A0A0K0K1E9 115 aa3.2□□□□□ -1.9
PABPC1-220ENST00000522658 IFITM1P13164 125 aa3.2□□□□□ -1.9
PABPC1-220ENST00000522658 IGFL1Q6UW32 110 aa3.2□□□□□ -1.9
PABPC1-220ENST00000522658 RBM12B-AS1Q9P1G2 102 aa3.2□□□□□ -1.9
PABPC1-220ENST00000522658 SCGB1D1O95968 90 aa3.19□□□□□ -1.9
PABPC1-220ENST00000522658 Q6ZQY7 126 aa3.19□□□□□ -1.9
PABPC1-220ENST00000522658 LITAFQ99732 161 aa3.19□□□□□ -1.9
PABPC1-220ENST00000522658 hADV29S1A0JD25 119 aa3.18□□□□□ -1.9
PABPC1-220ENST00000522658 SYS1-DBNDD2H3BUS1 97 aa3.18□□□□□ -1.9
PABPC1-220ENST00000522658 SNCGO76070 127 aa3.18□□□□□ -1.9
PABPC1-220ENST00000522658 Q6ZVH6 145 aa3.18□□□□□ -1.9
PABPC1-220ENST00000522658 SNHG12Q9BXW3 62 aa3.18□□□□□ -1.9
PABPC1-220ENST00000522658 KRTAP10-10P60014 251 aa3.17□□□□□ -1.9
PABPC1-220ENST00000522658 PET117Q6UWS5 81 aa3.17□□□□□ -1.9
PABPC1-220ENST00000522658 MTURNQ8N3F0 131 aa3.17□□□□□ -1.9
PABPC1-220ENST00000522658 SMIM11BQ8TCY0 68 aa3.17□□□□□ -1.9
PABPC1-220ENST00000522658 C20orf166-AS1Q96NR2 134 aa3.17□□□□□ -1.9
PABPC1-220ENST00000522658 SIGMAR1Q99720 223 aa3.17□□□□□ -1.9
PABPC1-220ENST00000522658 C12orf57Q99622 126 aa3.16□□□□□ -1.9
PABPC1-220ENST00000522658 TTTY13Q9BZ97 58 aa3.16□□□□□ -1.9
PABPC1-220ENST00000522658 OCIAD2Q56VL3 154 aa3.15□□□□□ -1.91
PABPC1-220ENST00000522658 LINC01545Q5VT33 79 aa3.15□□□□□ -1.91
PABPC1-220ENST00000522658 MUSTN1Q8IVN3 82 aa3.15□□□□□ -1.91
PABPC1-220ENST00000522658 PPDPFLQ8WWR9 84 aa3.15□□□□□ -1.91
PABPC1-220ENST00000522658 YPEL4Q96NS1 127 aa3.15□□□□□ -1.91
PABPC1-220ENST00000522658 KRTDAPP60985 99 aa3.14□□□□□ -1.91
PABPC1-220ENST00000522658 BVES-AS1Q5T3Y7 98 aa3.14□□□□□ -1.91
PABPC1-220ENST00000522658 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.14□□□□□ -1.91
PABPC1-220ENST00000522658 LINC00575Q6W349 94 aa3.14□□□□□ -1.91
PABPC1-220ENST00000522658 A8MUU9 505 aa3.13□□□□□ -1.91
PABPC1-220ENST00000522658 H3BUT2 72 aa3.13□□□□□ -1.91
PABPC1-220ENST00000522658 MT2AP02795 61 aa3.13□□□□□ -1.91
PABPC1-220ENST00000522658 A0A087WSZ3 146 aa3.12□□□□□ -1.91
PABPC1-220ENST00000522658 DSCR10P59022 87 aa3.12□□□□□ -1.91
PABPC1-220ENST00000522658 TEN1Q86WV5 123 aa3.12□□□□□ -1.91
PABPC1-220ENST00000522658 PAM16Q9Y3D7 125 aa3.12□□□□□ -1.91
PABPC1-220ENST00000522658 USH2AO75445 5202 aa3.12□□□□□ -1.91
PABPC1-220ENST00000522658 HSBP1L1C9JCN9 74 aa3.11□□□□□ -1.91
PABPC1-220ENST00000522658 C3orf79P0CE67 100 aa3.11□□□□□ -1.91
PABPC1-220ENST00000522658 LINC00313P59037 77 aa3.11□□□□□ -1.91
PABPC1-220ENST00000522658 MT1FP04733 61 aa3.1□□□□□ -1.91
PABPC1-220ENST00000522658 ATOH7Q8N100 152 aa3.1□□□□□ -1.91
PABPC1-220ENST00000522658 COLCA2A8K830 154 aa3.09□□□□□ -1.91
PABPC1-220ENST00000522658 IGKV4-1P06312 121 aa3.09□□□□□ -1.91
PABPC1-220ENST00000522658 FCGBPQ9Y6R7 5405 aaPredicted RBP3.09□□□□□ -1.92
PABPC1-220ENST00000522658 SSPOA2VEC9 5147 aa3.08□□□□□ -1.92
PABPC1-220ENST00000522658 HIST1H2BKO60814 126 aa3.08□□□□□ -1.92
PABPC1-220ENST00000522658 HIST1H2BJP06899 126 aa3.08□□□□□ -1.92
PABPC1-220ENST00000522658 HIST1H2BOP23527 126 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 133 ms