RNA–Protein interactions for RNA: ENST00000522178.1

VDAC3-210, Transcript of voltage dependent anion channel 3, humanhuman

TSL 3

Gene VDAC3, Length 272 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDAC3-210ENST00000522178 NOP10Q9NPE3 64 aaKnown RBP2.05□□□□□ -2.08
VDAC3-210ENST00000522178 ASCC3Q8N3C0 2202 aaKnown RBP2.05□□□□□ -2.08
VDAC3-210ENST00000522178 SPRR1AP35321 89 aa2.03□□□□□ -2.08
VDAC3-210ENST00000522178 CACNA1BQ00975 2339 aa2.03□□□□□ -2.08
VDAC3-210ENST00000522178 ABCA1O95477 2261 aa2.03□□□□□ -2.08
VDAC3-210ENST00000522178 PLCE1Q9P212 2302 aa2.02□□□□□ -2.09
VDAC3-210ENST00000522178 APELAP0DMC3 54 aa2.02□□□□□ -2.09
VDAC3-210ENST00000522178 SPRR1BP22528 89 aa2.02□□□□□ -2.09
VDAC3-210ENST00000522178 PRLHP81277 87 aa2.02□□□□□ -2.09
VDAC3-210ENST00000522178 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.01□□□□□ -2.09
VDAC3-210ENST00000522178 RHPN1-AS1Q9BWJ2 59 aa2□□□□□ -2.09
VDAC3-210ENST00000522178 TPRP12270 2363 aaKnown RBP2□□□□□ -2.09
VDAC3-210ENST00000522178 WNK2Q9Y3S1 2297 aa1.98□□□□□ -2.09
VDAC3-210ENST00000522178 Q5VSD8 79 aa1.98□□□□□ -2.09
VDAC3-210ENST00000522178 PRO0255Q9UI72 69 aa1.98□□□□□ -2.09
VDAC3-210ENST00000522178 C10orf95Q9H7T3 257 aa1.97□□□□□ -2.09
VDAC3-210ENST00000522178 APLNQ9ULZ1 77 aa1.97□□□□□ -2.09
VDAC3-210ENST00000522178 ALMS1Q8TCU4 4167 aa1.96□□□□□ -2.1
VDAC3-210ENST00000522178 Q9Y3F1 56 aa1.96□□□□□ -2.1
VDAC3-210ENST00000522178 NAV3Q8IVL0 2385 aa1.96□□□□□ -2.1
VDAC3-210ENST00000522178 DEFB110Q30KQ9 67 aa1.95□□□□□ -2.1
VDAC3-210ENST00000522178 CRCT1Q9UGL9 99 aa1.94□□□□□ -2.1
VDAC3-210ENST00000522178 S4R3F8 94 aa1.94□□□□□ -2.1
VDAC3-210ENST00000522178 COL6A6A6NMZ7 2263 aa1.93□□□□□ -2.1
VDAC3-210ENST00000522178 HTN1P15515 57 aa1.93□□□□□ -2.1
VDAC3-210ENST00000522178 DEFB108BQ8NET1 73 aa1.93□□□□□ -2.1
VDAC3-210ENST00000522178 SPINK1P00995 79 aa1.92□□□□□ -2.1
VDAC3-210ENST00000522178 LELP1Q5T871 98 aa1.92□□□□□ -2.1
VDAC3-210ENST00000522178 FAM208BQ5VWN6 2430 aa1.91□□□□□ -2.1
VDAC3-210ENST00000522178 HELZ2Q9BYK8 2649 aaKnown RBP1.89□□□□□ -2.11
VDAC3-210ENST00000522178 FLG2Q5D862 2391 aaPredicted RBP1.87□□□□□ -2.11
VDAC3-210ENST00000522178 DEFB1P60022 68 aa1.87□□□□□ -2.11
VDAC3-210ENST00000522178 PIEZO2Q9H5I5 2752 aa1.87□□□□□ -2.11
VDAC3-210ENST00000522178 WNK1Q9H4A3 2382 aa1.86□□□□□ -2.11
VDAC3-210ENST00000522178 ZDBF2Q9HCK1 2354 aa1.86□□□□□ -2.11
VDAC3-210ENST00000522178 M0QZ58 72 aa1.86□□□□□ -2.11
VDAC3-210ENST00000522178 PCNX1Q96RV3 2341 aa1.84□□□□□ -2.12
VDAC3-210ENST00000522178 IGF2RP11717 2491 aa1.83□□□□□ -2.12
VDAC3-210ENST00000522178 PKDREJQ9NTG1 2253 aa1.83□□□□□ -2.12
VDAC3-210ENST00000522178 A0A0D9SG42 100 aa1.82□□□□□ -2.12
VDAC3-210ENST00000522178 CD52P31358 61 aa1.82□□□□□ -2.12
VDAC3-210ENST00000522178 SPTBN1Q01082 2364 aaKnown RBP1.81□□□□□ -2.12
VDAC3-210ENST00000522178 PTPRZ1P23471 2315 aaPredicted RBP1.81□□□□□ -2.12
VDAC3-210ENST00000522178 AKAP6Q13023 2319 aa1.81□□□□□ -2.12
VDAC3-210ENST00000522178 KRTAP10-4P60372 401 aaPredicted RBP1.8□□□□□ -2.12
VDAC3-210ENST00000522178 JMJD1CQ15652 2540 aa1.78□□□□□ -2.12
VDAC3-210ENST00000522178 ROS1P08922 2347 aa1.78□□□□□ -2.12
VDAC3-210ENST00000522178 H3BNG1 76 aa1.78□□□□□ -2.12
VDAC3-210ENST00000522178 A0A0C4DFX4 3053 aa1.77□□□□□ -2.13
VDAC3-210ENST00000522178 FBN3Q75N90 2809 aa1.77□□□□□ -2.13
VDAC3-210ENST00000522178 ZNF462Q96JM2 2506 aa1.77□□□□□ -2.13
VDAC3-210ENST00000522178 DEFB124Q8NES8 71 aa1.76□□□□□ -2.13
VDAC3-210ENST00000522178 DEFB136Q30KP8 78 aa1.75□□□□□ -2.13
VDAC3-210ENST00000522178 SPTA1P02549 2419 aa1.75□□□□□ -2.13
VDAC3-210ENST00000522178 CACNA1HO95180 2353 aa1.74□□□□□ -2.13
VDAC3-210ENST00000522178 ACACAQ13085 2346 aa1.74□□□□□ -2.13
VDAC3-210ENST00000522178 SPINK6Q6UWN8 80 aa1.73□□□□□ -2.13
VDAC3-210ENST00000522178 KRTAP4-1Q9BYQ7 146 aa1.73□□□□□ -2.13
VDAC3-210ENST00000522178 TENM1Q9UKZ4 2725 aa1.73□□□□□ -2.13
VDAC3-210ENST00000522178 CSPG4Q6UVK1 2322 aa1.72□□□□□ -2.13
VDAC3-210ENST00000522178 LINC01556Q5JQF7 62 aa1.72□□□□□ -2.13
VDAC3-210ENST00000522178 WDR87Q6ZQQ6 2873 aa1.71□□□□□ -2.14
VDAC3-210ENST00000522178 A0A096LNI7 61 aa1.7□□□□□ -2.14
VDAC3-210ENST00000522178 CHD7Q9P2D1 2997 aa1.7□□□□□ -2.14
VDAC3-210ENST00000522178 MGAQ8IWI9 3026 aa1.69□□□□□ -2.14
VDAC3-210ENST00000522178 SPART-AS1P0CW21 52 aa1.68□□□□□ -2.14
VDAC3-210ENST00000522178 DEFB133Q30KQ1 61 aa1.68□□□□□ -2.14
VDAC3-210ENST00000522178 DSPP15924 2871 aaKnown RBP1.68□□□□□ -2.14
VDAC3-210ENST00000522178 SPTBN2O15020 2390 aa1.67□□□□□ -2.14
VDAC3-210ENST00000522178 TNP1P09430 55 aa1.67□□□□□ -2.14
VDAC3-210ENST00000522178 MAP1BP46821 2468 aaKnown RBP1.67□□□□□ -2.14
VDAC3-210ENST00000522178 TENM2Q9NT68 2774 aa1.67□□□□□ -2.14
VDAC3-210ENST00000522178 ABCA2Q9BZC7 2435 aa1.66□□□□□ -2.14
VDAC3-210ENST00000522178 A0A096LPF7 62 aa1.66□□□□□ -2.14
VDAC3-210ENST00000522178 SPTBN4Q9H254 2564 aa1.64□□□□□ -2.15
VDAC3-210ENST00000522178 FCGBPQ9Y6R7 5405 aaPredicted RBP1.64□□□□□ -2.15
VDAC3-210ENST00000522178 C9orf92A6NGG3 77 aa1.64□□□□□ -2.15
VDAC3-210ENST00000522178 C2CD3Q4AC94 2353 aa1.63□□□□□ -2.15
VDAC3-210ENST00000522178 RPS29P62273 56 aaKnown RBP1.63□□□□□ -2.15
VDAC3-210ENST00000522178 UBR5O95071 2799 aaPredicted RBP1.63□□□□□ -2.15
VDAC3-210ENST00000522178 F8P00451 2351 aa1.62□□□□□ -2.15
VDAC3-210ENST00000522178 REV3LO60673 3130 aa1.61□□□□□ -2.15
VDAC3-210ENST00000522178 TRANK1O15050 2925 aa1.61□□□□□ -2.15
VDAC3-210ENST00000522178 DEFB135Q30KP9 77 aa1.6□□□□□ -2.15
VDAC3-210ENST00000522178 OTOGQ6ZRI0 2925 aa1.6□□□□□ -2.15
VDAC3-210ENST00000522178 ASH1LQ9NR48 2969 aaKnown RBP1.59□□□□□ -2.15
VDAC3-210ENST00000522178 APC2O95996 2303 aa1.59□□□□□ -2.15
VDAC3-210ENST00000522178 NCOR1O75376 2440 aa1.58□□□□□ -2.16
VDAC3-210ENST00000522178 CELSR2Q9HCU4 2923 aa1.57□□□□□ -2.16
VDAC3-210ENST00000522178 CEP290O15078 2479 aa1.57□□□□□ -2.16
VDAC3-210ENST00000522178 PKD1L2Q7Z442 2459 aa1.57□□□□□ -2.16
VDAC3-210ENST00000522178 COL6A5A8TX70 2615 aa1.57□□□□□ -2.16
VDAC3-210ENST00000522178 GVINP1Q7Z2Y8 2422 aa1.57□□□□□ -2.16
VDAC3-210ENST00000522178 CEP250Q9BV73 2442 aa1.57□□□□□ -2.16
VDAC3-210ENST00000522178 VWFP04275 2813 aa1.56□□□□□ -2.16
VDAC3-210ENST00000522178 PRRC2CQ9Y520 2896 aaKnown RBP1.56□□□□□ -2.16
VDAC3-210ENST00000522178 SRRM2Q9UQ35 2752 aaKnown RBP1.56□□□□□ -2.16
VDAC3-210ENST00000522178 CEP350Q5VT06 3117 aa1.55□□□□□ -2.16
VDAC3-210ENST00000522178 CHD6Q8TD26 2715 aa1.55□□□□□ -2.16
VDAC3-210ENST00000522178 TNRC18O15417 2968 aaPredicted RBP1.55□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms