RNA–Protein interactions for RNA: ENST00000521260.1

NPM1-207, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-207ENST00000521260 SPTBN4Q9H254 2564 aa2.96□□□□□ -1.94
NPM1-207ENST00000521260 CEP250Q9BV73 2442 aa2.95□□□□□ -1.94
NPM1-207ENST00000521260 ZNF292O60281 2723 aa2.95□□□□□ -1.94
NPM1-207ENST00000521260 SDK1Q7Z5N4 2213 aa2.95□□□□□ -1.94
NPM1-207ENST00000521260 HTN3P15516 51 aa2.95□□□□□ -1.94
NPM1-207ENST00000521260 RPL37P61927 97 aaKnown RBP2.95□□□□□ -1.94
NPM1-207ENST00000521260 C14orf177Q52M58 125 aa2.95□□□□□ -1.94
NPM1-207ENST00000521260 EP300Q09472 2414 aaPredicted RBP2.94□□□□□ -1.94
NPM1-207ENST00000521260 WNK1Q9H4A3 2382 aa2.94□□□□□ -1.94
NPM1-207ENST00000521260 VPS13AQ96RL7 3174 aa2.93□□□□□ -1.94
NPM1-207ENST00000521260 GPR179Q6PRD1 2367 aa2.93□□□□□ -1.94
NPM1-207ENST00000521260 DMXL1Q9Y485 3027 aa2.93□□□□□ -1.94
NPM1-207ENST00000521260 NCOR2Q9Y618 2525 aa2.92□□□□□ -1.94
NPM1-207ENST00000521260 ZZEF1O43149 2961 aa2.92□□□□□ -1.94
NPM1-207ENST00000521260 ACACBO00763 2458 aa2.92□□□□□ -1.94
NPM1-207ENST00000521260 LCE5AQ5TCM9 118 aa2.92□□□□□ -1.94
NPM1-207ENST00000521260 DEFB124Q8NES8 71 aa2.92□□□□□ -1.94
NPM1-207ENST00000521260 FAM208BQ5VWN6 2430 aa2.92□□□□□ -1.94
NPM1-207ENST00000521260 MAP1BP46821 2468 aaKnown RBP2.92□□□□□ -1.94
NPM1-207ENST00000521260 USP24Q9UPU5 2620 aa2.91□□□□□ -1.94
NPM1-207ENST00000521260 KRTAP24-1Q3LI83 254 aa2.91□□□□□ -1.94
NPM1-207ENST00000521260 SPTBN2O15020 2390 aa2.91□□□□□ -1.94
NPM1-207ENST00000521260 ASPMQ8IZT6 3477 aa2.9□□□□□ -1.94
NPM1-207ENST00000521260 EPG5Q9HCE0 2579 aa2.9□□□□□ -1.94
NPM1-207ENST00000521260 K7EIL1 84 aa2.9□□□□□ -1.95
NPM1-207ENST00000521260 WDFY3Q8IZQ1 3526 aa2.9□□□□□ -1.95
NPM1-207ENST00000521260 TPRP12270 2363 aaKnown RBP2.89□□□□□ -1.95
NPM1-207ENST00000521260 A0A096LNI7 61 aa2.89□□□□□ -1.95
NPM1-207ENST00000521260 KRTAP7-1Q8IUC3 87 aa2.89□□□□□ -1.95
NPM1-207ENST00000521260 PKDREJQ9NTG1 2253 aa2.89□□□□□ -1.95
NPM1-207ENST00000521260 SPINK1P00995 79 aa2.88□□□□□ -1.95
NPM1-207ENST00000521260 DEFB135Q30KP9 77 aa2.88□□□□□ -1.95
NPM1-207ENST00000521260 PLAC4Q8WY50 150 aa2.88□□□□□ -1.95
NPM1-207ENST00000521260 CNOT1A5YKK6 2376 aaKnown RBP2.88□□□□□ -1.95
NPM1-207ENST00000521260 TPRXLQ17RH7 258 aa2.87□□□□□ -1.95
NPM1-207ENST00000521260 A0A1W2PPR1 153 aa2.86□□□□□ -1.95
NPM1-207ENST00000521260 PKD1L2Q7Z442 2459 aa2.85□□□□□ -1.95
NPM1-207ENST00000521260 CHD8Q9HCK8 2581 aa2.85□□□□□ -1.95
NPM1-207ENST00000521260 BAHCC1Q9P281 2608 aa2.85□□□□□ -1.95
NPM1-207ENST00000521260 J3QKU1 62 aa2.85□□□□□ -1.95
NPM1-207ENST00000521260 SPINK6Q6UWN8 80 aa2.85□□□□□ -1.95
NPM1-207ENST00000521260 MGAQ8IWI9 3026 aa2.85□□□□□ -1.95
NPM1-207ENST00000521260 CFAP47Q6ZTR5 3102 aa2.85□□□□□ -1.95
NPM1-207ENST00000521260 SPEGQ15772 3267 aa2.85□□□□□ -1.95
NPM1-207ENST00000521260 SMG1Q96Q15 3661 aaKnown RBP2.84□□□□□ -1.95
NPM1-207ENST00000521260 FRYLO94915 3013 aa2.84□□□□□ -1.95
NPM1-207ENST00000521260 KRTAP13-1Q8IUC0 172 aa2.84□□□□□ -1.95
NPM1-207ENST00000521260 IGF2RP11717 2491 aa2.84□□□□□ -1.96
NPM1-207ENST00000521260 LAMA5O15230 3695 aa2.83□□□□□ -1.96
NPM1-207ENST00000521260 CHD6Q8TD26 2715 aa2.83□□□□□ -1.96
NPM1-207ENST00000521260 ACACAQ13085 2346 aa2.83□□□□□ -1.96
NPM1-207ENST00000521260 ATRXP46100 2492 aa2.83□□□□□ -1.96
NPM1-207ENST00000521260 CEP295Q9C0D2 2601 aa2.82□□□□□ -1.96
NPM1-207ENST00000521260 DEFB4AO15263 64 aa2.82□□□□□ -1.96
NPM1-207ENST00000521260 PRO2289Q9P1D8 64 aa2.82□□□□□ -1.96
NPM1-207ENST00000521260 COL6A6A6NMZ7 2263 aa2.81□□□□□ -1.96
NPM1-207ENST00000521260 APC2O95996 2303 aa2.81□□□□□ -1.96
NPM1-207ENST00000521260 NOTCH3Q9UM47 2321 aa2.81□□□□□ -1.96
NPM1-207ENST00000521260 ALMS1Q8TCU4 4167 aa2.81□□□□□ -1.96
NPM1-207ENST00000521260 CELSR3Q9NYQ7 3312 aa2.81□□□□□ -1.96
NPM1-207ENST00000521260 FREM2Q5SZK8 3169 aa2.8□□□□□ -1.96
NPM1-207ENST00000521260 ANKRD11Q6UB99 2663 aaPredicted RBP2.8□□□□□ -1.96
NPM1-207ENST00000521260 LAMA1P25391 3075 aa2.8□□□□□ -1.96
NPM1-207ENST00000521260 FRYQ5TBA9 3013 aa2.8□□□□□ -1.96
NPM1-207ENST00000521260 UBE2DNLQ8IWF7 75 aa2.79□□□□□ -1.96
NPM1-207ENST00000521260 TYMSOSQ8TAI1 123 aa2.79□□□□□ -1.96
NPM1-207ENST00000521260 FASNP49327 2511 aaKnown RBP2.79□□□□□ -1.96
NPM1-207ENST00000521260 ZFYVE26Q68DK2 2539 aa2.79□□□□□ -1.96
NPM1-207ENST00000521260 LOC400499M0QZD8 3231 aa2.79□□□□□ -1.96
NPM1-207ENST00000521260 BSNQ9UPA5 3926 aa2.78□□□□□ -1.96
NPM1-207ENST00000521260 AKAP13Q12802 2813 aa2.78□□□□□ -1.96
NPM1-207ENST00000521260 IGSF10Q6WRI0 2623 aa2.78□□□□□ -1.96
NPM1-207ENST00000521260 DMXL2Q8TDJ6 3036 aa2.77□□□□□ -1.97
NPM1-207ENST00000521260 ITPR1Q14643 2758 aa2.77□□□□□ -1.97
NPM1-207ENST00000521260 ASH1LQ9NR48 2969 aaKnown RBP2.76□□□□□ -1.97
NPM1-207ENST00000521260 INE1O15225 51 aa2.76□□□□□ -1.97
NPM1-207ENST00000521260 APLNQ9ULZ1 77 aa2.76□□□□□ -1.97
NPM1-207ENST00000521260 PCNX1Q96RV3 2341 aa2.76□□□□□ -1.97
NPM1-207ENST00000521260 MYO18BQ8IUG5 2567 aa2.75□□□□□ -1.97
NPM1-207ENST00000521260 ROS1P08922 2347 aa2.75□□□□□ -1.97
NPM1-207ENST00000521260 GCN1Q92616 2671 aaKnown RBP2.75□□□□□ -1.97
NPM1-207ENST00000521260 HELZ2Q9BYK8 2649 aaKnown RBP2.74□□□□□ -1.97
NPM1-207ENST00000521260 ZNF462Q96JM2 2506 aa2.74□□□□□ -1.97
NPM1-207ENST00000521260 NBEAQ8NFP9 2946 aa2.74□□□□□ -1.97
NPM1-207ENST00000521260 PP632Q6XCG6 107 aa2.74□□□□□ -1.97
NPM1-207ENST00000521260 S4R3F8 94 aa2.74□□□□□ -1.97
NPM1-207ENST00000521260 DSPP15924 2871 aaKnown RBP2.73□□□□□ -1.97
NPM1-207ENST00000521260 C10orf95Q9H7T3 257 aa2.73□□□□□ -1.97
NPM1-207ENST00000521260 SPENQ96T58 3664 aaKnown RBP2.73□□□□□ -1.97
NPM1-207ENST00000521260 UBR5O95071 2799 aaPredicted RBP2.72□□□□□ -1.97
NPM1-207ENST00000521260 AKAP6Q13023 2319 aa2.72□□□□□ -1.97
NPM1-207ENST00000521260 Q6ZRN7 208 aaPredicted RBP2.72□□□□□ -1.97
NPM1-207ENST00000521260 KALRNO60229 2985 aa2.72□□□□□ -1.97
NPM1-207ENST00000521260 PTPN13Q12923 2485 aa2.71□□□□□ -1.98
NPM1-207ENST00000521260 ATMQ13315 3056 aa2.7□□□□□ -1.98
NPM1-207ENST00000521260 NBPF19A0A087WUL8 3843 aa2.7□□□□□ -1.98
NPM1-207ENST00000521260 KRTAP21-3Q3LHN1 58 aa2.7□□□□□ -1.98
NPM1-207ENST00000521260 SPACA4Q8TDM5 124 aa2.7□□□□□ -1.98
NPM1-207ENST00000521260 SPTA1P02549 2419 aa2.7□□□□□ -1.98
NPM1-207ENST00000521260 RELNP78509 3460 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 202.5 ms